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1 <?xml version="1.0"?>
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2 <tool name="Wormbase" id="wormbase" tool_type="data_source">
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3 <description>server</description>
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4 <command interpreter="python">data_source.py $output $__app__.config.output_size_limit</command>
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5 <inputs action="http://www.wormbase.org/db/seq/gbgff/c_elegans/" check_values="false" target="_top">
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6 <display>go to Wormbase server $GALAXY_URL</display>
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7 <param name="GALAXY_URL" type="baseurl" value="/tool_runner?tool_id=wormbase" />
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8 </inputs>
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9 <request_param_translation>
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10 <request_param galaxy_name="URL" remote_name="URL" missing="">
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11 <append_param separator="&" first_separator="?" join="=">
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12 <value name="d" missing="" />
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13 <value name="dbkey" missing="" />
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14 <value name="q" missing="" />
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15 <value name="s" missing="" />
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16 <value name="t" missing="" />
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17 </append_param>
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18 </request_param>
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19 <request_param galaxy_name="URL_method" remote_name="URL_method" missing="post" />
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20 <request_param galaxy_name="data_type" remote_name="data_type" missing="auto" />
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21 </request_param_translation>
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22 <uihints minwidth="800"/>
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23 <outputs>
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24 <data name="output" format="txt" label="${tool.name} on $getVar( 'q', 'unknown position' )"/>
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25 </outputs>
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26 <options sanitize="False" refresh="True"/>
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27 </tool>
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