Mercurial > repos > xuebing > sharplabtool

annotate tools/human_genome_variation/pass_wrapper.sh @ 2:c2a356708570

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author xuebing
date Fri, 09 Mar 2012 19:45:42 -0500
parents 9071e359b9a3
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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1 #!/usr/bin/env bash
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2
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3 export PATH=$PATH:$(dirname $0)
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4
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5 input=$1
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6 min_window=$2
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7 max_window=$3
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8 false_num=$4
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9 output=$5
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10
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11 pass "$input" "$min_window" "$max_window" "$false_num" "$output" >/dev/null
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12 sed -i -e 's/\t\t*/\t/g' "$output"
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13