annotate tools/mytools/cdf-old-not-used/cdf.xml @ 1:cdcb0ce84a1b

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author xuebing
date Fri, 09 Mar 2012 19:45:15 -0500
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1 <tool id="cdf" name="CDF">
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2 <description>plot of two columns</description>
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3 <command interpreter="python">cdf.py $input $output $columns $log $labels $title </command>
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4 <inputs>
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5 <param name="input" format="tabular" type="data" label="input file"/>
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6 <param name="columns" size="4" type="text" label="column numbers (sep by comma)" help="i.e. plot CDF for data in column 2 and 3" value="2,3"/>
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7 <param name="title" size="50" type="text" label="Figure title (no space allowed)" value="CDF-plot"/>
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8 <param name="labels" size="50" type="text" label="Figure legend (sep by comma,no space allowed)" value="sample,control"/>
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9 <param name="log" label="log transform the data" type="boolean" truevalue="log" falsevalue="none" checked="False"/>
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10 </inputs>
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11 <outputs>
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12 <data format="pdf" name="output" />
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13 </outputs>
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14 <help>
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16 **What it does**
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18 This tool plots the CDF of two data columns in the input file. A KS test p-value is also shown.
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20 </help>
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21 </tool>