Mercurial > repos > xuebing > sharplabtool
comparison tools/data_source/wormbase.xml @ 0:9071e359b9a3
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| author | xuebing |
|---|---|
| date | Fri, 09 Mar 2012 19:37:19 -0500 |
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| children |
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| -1:000000000000 | 0:9071e359b9a3 |
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| 1 <?xml version="1.0"?> | |
| 2 <tool name="Wormbase" id="wormbase" tool_type="data_source"> | |
| 3 <description>server</description> | |
| 4 <command interpreter="python">data_source.py $output $__app__.config.output_size_limit</command> | |
| 5 <inputs action="http://www.wormbase.org/db/seq/gbgff/c_elegans/" check_values="false" target="_top"> | |
| 6 <display>go to Wormbase server $GALAXY_URL</display> | |
| 7 <param name="GALAXY_URL" type="baseurl" value="/tool_runner?tool_id=wormbase" /> | |
| 8 </inputs> | |
| 9 <request_param_translation> | |
| 10 <request_param galaxy_name="URL" remote_name="URL" missing=""> | |
| 11 <append_param separator="&" first_separator="?" join="="> | |
| 12 <value name="d" missing="" /> | |
| 13 <value name="dbkey" missing="" /> | |
| 14 <value name="q" missing="" /> | |
| 15 <value name="s" missing="" /> | |
| 16 <value name="t" missing="" /> | |
| 17 </append_param> | |
| 18 </request_param> | |
| 19 <request_param galaxy_name="URL_method" remote_name="URL_method" missing="post" /> | |
| 20 <request_param galaxy_name="data_type" remote_name="data_type" missing="auto" /> | |
| 21 </request_param_translation> | |
| 22 <uihints minwidth="800"/> | |
| 23 <outputs> | |
| 24 <data name="output" format="txt" label="${tool.name} on $getVar( 'q', 'unknown position' )"/> | |
| 25 </outputs> | |
| 26 <options sanitize="False" refresh="True"/> | |
| 27 </tool> |