Mercurial > repos > xuebing > sharplabtool

comparison tools/human_genome_variation/pass_wrapper.sh @ 0:9071e359b9a3

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author xuebing
date Fri, 09 Mar 2012 19:37:19 -0500
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-1:000000000000 0:9071e359b9a3
1 #!/usr/bin/env bash
2
3 export PATH=$PATH:$(dirname $0)
4
5 input=$1
6 min_window=$2
7 max_window=$3
8 false_num=$4
9 output=$5
10
11 pass "$input" "$min_window" "$max_window" "$false_num" "$output" >/dev/null
12 sed -i -e 's/\t\t*/\t/g' "$output"
13