Mercurial > repos > xuebing > sharplabtool
diff tools/data_source/import.xml @ 0:9071e359b9a3
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author | xuebing |
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date | Fri, 09 Mar 2012 19:37:19 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tools/data_source/import.xml Fri Mar 09 19:37:19 2012 -0500 @@ -0,0 +1,27 @@ +<tool id="Featured datasets4" name="Featured datasets"> + <description>(PSU prepared queries)</description> + <command interpreter="python">import.py $data $output</command> + <inputs> + <display>$data</display> + <param name="data" type="select" display="radio"> + <option value="eryth">Erythroid predicted cis-regulatory modules</option> + <option value="exons">Exons of protein-coding genes in the mouse genome, assembly mm3</option> + <option value="cishg16 ">Known cis-regulatory modules in the human HBB gene complex (hg16)</option> + <option value="cishg17">Known cis-regulatory modules in the human HBB gene complex (hg17)</option> + <option value="krhg16">Known regulatory regions (hg16)</option> + <option value="krhg17">Known regulatory regions (hg17)</option> + <option value="tARhg16mmc">Human (hg16) evolutionary cold region (vs mouse)</option> + <option value="tARhg16mmm">Human (hg16) evolutionary medium region (vs mouse)</option> + <option value="tARhg16mmh">Human (hg16) evolutionary hot region (vs mouse)</option> + <option value="tARhg16rnc">Human (hg16) evolutionary cold region (vs rat)</option> + <option value="tARhg16rnm">Human (hg16) evolutionary medium region (vs rat)</option> + <option value="tARhg16rnh">Human (hg16) evolutionary hot region (vs rat)</option> + <option value="phastConsHg16">phastCons hg16 (stringent, top ~5%) from UCSC</option> + <option value="omimhg16">OMIM disorders (hg16)</option> + <option value="omimhg17">OMIM disorders (hg17)</option> + </param> + </inputs> + <outputs> + <data format="bed" name="output" /> + </outputs> +</tool>