annotate tools/data_source/import.xml @ 0:9071e359b9a3

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author xuebing
date Fri, 09 Mar 2012 19:37:19 -0500
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1 <tool id="Featured datasets4" name="Featured datasets">
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2 <description>(PSU prepared queries)</description>
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3 <command interpreter="python">import.py $data $output</command>
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4 <inputs>
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5 <display>$data</display>
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6 <param name="data" type="select" display="radio">
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7 <option value="eryth">Erythroid predicted cis-regulatory modules</option>
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8 <option value="exons">Exons of protein-coding genes in the mouse genome, assembly mm3</option>
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9 <option value="cishg16 ">Known cis-regulatory modules in the human HBB gene complex (hg16)</option>
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10 <option value="cishg17">Known cis-regulatory modules in the human HBB gene complex (hg17)</option>
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11 <option value="krhg16">Known regulatory regions (hg16)</option>
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12 <option value="krhg17">Known regulatory regions (hg17)</option>
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13 <option value="tARhg16mmc">Human (hg16) evolutionary cold region (vs mouse)</option>
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14 <option value="tARhg16mmm">Human (hg16) evolutionary medium region (vs mouse)</option>
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15 <option value="tARhg16mmh">Human (hg16) evolutionary hot region (vs mouse)</option>
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16 <option value="tARhg16rnc">Human (hg16) evolutionary cold region (vs rat)</option>
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17 <option value="tARhg16rnm">Human (hg16) evolutionary medium region (vs rat)</option>
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18 <option value="tARhg16rnh">Human (hg16) evolutionary hot region (vs rat)</option>
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19 <option value="phastConsHg16">phastCons hg16 (stringent, top ~5%) from UCSC</option>
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20 <option value="omimhg16">OMIM disorders (hg16)</option>
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21 <option value="omimhg17">OMIM disorders (hg17)</option>
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22 </param>
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23 </inputs>
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24 <outputs>
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25 <data format="bed" name="output" />
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26 </outputs>
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27 </tool>