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author yating-l
date Tue, 30 May 2017 18:18:20 -0400
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="ucsc_tools_340" version="1.0">
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4 <install version="1.0">
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5 <actions_group>
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6 <actions architecture="x86_64" os="linux">
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7 <action type="download_by_url">http://old-gep.wustl.edu/~galaxy/ucsc_tools_340.tar.gz</action>
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8 <action type="move_directory_files">
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9 <source_directory>.</source_directory>
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10 <destination_directory>$INSTALL_DIR/bin</destination_directory>
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11 </action>
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12 </actions>
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13 <action type="set_environment">
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14 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
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15 </action>
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16 </actions_group>
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17 </install>
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18 <readme>The well known UCSC tools from Jim Kent.</readme>
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19 </package>
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20
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21 <package name="bedtools" version="2.24">
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22 <repository changeset_revision="3416a1d4a582" name="package_bedtools_2_24" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
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23 </package>
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24
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25 </tool_dependency>