Mercurial > repos > yating-l > bamtobigwig
comparison tool_dependencies.xml @ 0:61f39c77b13d draft
planemo upload commit 250051c3d660df43da92c76913552767ce142a45
| author | yating-l |
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| date | Wed, 12 Apr 2017 17:52:09 -0400 |
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| children |
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| -1:000000000000 | 0:61f39c77b13d |
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| 1 <?xml version="1.0"?> | |
| 2 <tool_dependency> | |
| 3 <package name="ucsc_tools_340" version="1.0"> | |
| 4 <install version="1.0"> | |
| 5 <actions_group> | |
| 6 <actions architecture="x86_64" os="linux"> | |
| 7 <action type="download_by_url">http://old-gep.wustl.edu/~galaxy/ucsc_tools_340.tar.gz</action> | |
| 8 <action type="move_directory_files"> | |
| 9 <source_directory>.</source_directory> | |
| 10 <destination_directory>$INSTALL_DIR/bin</destination_directory> | |
| 11 </action> | |
| 12 </actions> | |
| 13 <action type="set_environment"> | |
| 14 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> | |
| 15 </action> | |
| 16 </actions_group> | |
| 17 </install> | |
| 18 <readme>The well known UCSC tools from Jim Kent.</readme> | |
| 19 </package> | |
| 20 | |
| 21 <package name="bedtools" version="2.24"> | |
| 22 <repository changeset_revision="3416a1d4a582" name="package_bedtools_2_24" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> | |
| 23 </package> | |
| 24 | |
| 25 </tool_dependency> |