Mercurial > repos > yating-l > jbrowsearchivecreator
changeset 12:9161beae834f draft
planemo upload for repository https://github.com/goeckslab/jbrowse-archive-creator.git commit 08f15daf5442def561713fb9c673bb06c9a3a05f
| author | yating-l |
|---|---|
| date | Sat, 02 Jun 2018 13:08:46 -0400 |
| parents | 8886033b4f84 |
| children | 43a700afd457 |
| files | datatypes/__init__.pyc datatypes/converters/__init__.pyc datatypes/converters/gtfToGff3.pyc datatypes/validators/DataValidation.pyc datatypes/validators/GtfValidation.py datatypes/validators/GtfValidation.pyc datatypes/validators/__init__.pyc jbrowseArchiveCreator.xml util/__init__.pyc util/subtools.pyc |
| diffstat | 10 files changed, 2 insertions(+), 2 deletions(-) [+] |
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--- a/datatypes/validators/GtfValidation.py Mon May 14 23:30:31 2018 -0400 +++ b/datatypes/validators/GtfValidation.py Sat Jun 02 13:08:46 2018 -0400 @@ -74,7 +74,7 @@ start_position = fields[3] end_position = fields[4] - if start_position > 0 and end_position <= scaffold_size: + if int(start_position) > 0 and int(end_position) <= int(scaffold_size): # We are good, so we copy this line tmp.write(line) tmp.write(os.linesep)
--- a/jbrowseArchiveCreator.xml Mon May 14 23:30:31 2018 -0400 +++ b/jbrowseArchiveCreator.xml Sat Jun 02 13:08:46 2018 -0400 @@ -1,4 +1,4 @@ -<tool id="jbrowse_hub" name="JBrowse Archive Creator" version="2.1.4"> +<tool id="jbrowse_hub" name="JBrowse Archive Creator" version="2.1.5"> <description> This Galaxy tool is used to prepare your files to be ready for displaying on JBrowse with Apollo plugin </description>