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planemo upload commit d476446dd23645b740023fe2abacabeefca4c5a1-dirty
author yating-l
date Thu, 21 Sep 2017 16:37:59 -0400
parents a819439b6d76
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<?xml version="1.0" ?>
<tool_dependency>
    <package name="ucsc_hac" version="340">
        <install version="1.0">
            <actions_group>
                <actions architecture="x86_64" os="darwin">
                    <action type="download_by_url" sha256sum="3793f8a762e41905374cad2fca44f9547eacd81eccad53908f229fa2fcda294b">http://old-gep.wustl.edu/~galaxy/packages/ucsc_hac_340_macOS_x86_64.tar.gz</action>
                    <action type="move_directory_files">
                        <source_directory>.</source_directory>
                        <destination_directory>$INSTALL_DIR/bin</destination_directory>
                    </action>
                </actions>
                <actions architecture="x86_64" os="linux">
                    <action type="download_by_url" sha256sum="dba14232e2a404c0b83542529c98a60affbd7b672f6c8ae58384610c0b88e3b4">http://old-gep.wustl.edu/~galaxy/packages/ucsc_hac_340_linux_x86_64.tar.gz</action>
                    <action type="move_directory_files">
                        <source_directory>.</source_directory>
                        <destination_directory>$INSTALL_DIR/bin</destination_directory>
                    </action>
                </actions>
                <action type="set_environment">
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                </action>
            </actions_group>
         </install>
         <readme>The well known UCSC tools from Jim Kent. This subset of UCSC tools are used for HubArchiveCreator, including 
         - bedGraphToBigWig
         - bedToBigBed
         - gff3ToGenePred
         - gtfToGenePred
         - genePredToBed
         - genePredToBigGenePred
         - faToTwoBit
         - pslToBigPsl
         - twoBitInfo
         - pslCheck
         - validateFiles
         </readme>
    </package>
</tool_dependency>