view tool_dependencies.xml @ 1:06d9062f5430 draft default tip

planemo upload commit 93217f9e3a1bc1afc8ce971176e4ae0169a8f265
author sargentl
date Wed, 28 Nov 2018 14:20:39 -0500
parents 01ed8e112f2a
children
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<?xml version="1.0" ?>
<tool_dependency>
    <package name="regtools" version="0.5.0">
        <install version="1.0">
            <actions>
                <action type="shell_command">git clone http://github.com/griffithlab/regtools --recursive -b 0.5.0</action>
                <action type="make_directory">build</action>
                <action type="change_directory">build</action>
                <action type="set_environment_for_install">
                    <repository changeset_revision="1aea698a1c63" name="package_cmake_3_2_3" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu">
                        <package name="cmake" version="3.2.3"/>
                    </repository>
                </action>
                <action type="shell_command">cmake ..</action>
                <action type="shell_command">make</action>
                <action type="move_file">
                    <source>regtools</source>
                    <destination>$INSTALL_DIR</destination>
                </action>
                <action type="set_environment">
                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
                </action>
            </actions>
        </install>
    </package>
</tool_dependency>