Mercurial > repos > yating-l > rename_scaffolds

annotate test-data/sequence_with_tab.fa @ 4:e35a3509c160 draft

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planemo upload commit 3675b4447d11fb1cd75d505886e1bf693f9d07f5
author yating-l
date Thu, 26 Jul 2018 15:46:24 -0400
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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4
e35a3509c160 planemo upload commit 3675b4447d11fb1cd75d505886e1bf693f9d07f5
yating-l
parents:
diff changeset
1 >contig1'abcdé * _ {/&
e35a3509c160 planemo upload commit 3675b4447d11fb1cd75d505886e1bf693f9d07f5
yating-l
parents:
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2 AAAACTAATTTTATCAAAATCGGACAACTATATCATATAGCTGCCATACG
e35a3509c160 planemo upload commit 3675b4447d11fb1cd75d505886e1bf693f9d07f5
yating-l
parents:
diff changeset
3 AACGATCGGAAAATTGGTAAGTAAATAATTAAAAATATTATATCTTTGGT
e35a3509c160 planemo upload commit 3675b4447d11fb1cd75d505886e1bf693f9d07f5
yating-l
parents:
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4 >contig2 | 757â763.ii215âii225Stanke, M. and Waack
e35a3509c160 planemo upload commit 3675b4447d11fb1cd75d505886e1bf693f9d07f5
yating-l
parents:
diff changeset
5 AAAACTAATTTTATCAAAATCGGACAACTATATCATATAGCTGCCATACG
e35a3509c160 planemo upload commit 3675b4447d11fb1cd75d505886e1bf693f9d07f5
yating-l
parents:
diff changeset
6 AACGATCGGAAAATTGGTAAGTAAATAATTAAAAATATTATATCTTTGGT
e35a3509c160 planemo upload commit 3675b4447d11fb1cd75d505886e1bf693f9d07f5
yating-l
parents:
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7 >contig3 | prediction on sequence number 1 (length = 1992969, name = scaffold1|size1992969) ----- # # Constraints/Hints: # (none) # Predicted genes for sequence number 1 on both strands # start gene g1 scaffold1|size1992969 AUGUSTUS gene 17453 19382 0.11 + . g6 scaffold1|size1992969 AUGUSTUS transcript 17453 19382 0.11 + . g6.t1 scaffold1|size1992969 AUGUSTUS start_codon 17453 17455
e35a3509c160 planemo upload commit 3675b4447d11fb1cd75d505886e1bf693f9d07f5
yating-l
parents:
diff changeset
8 AAAACTAATTTTATCAAAATCGGACAACTATATCATATAGCTGCCATACG
e35a3509c160 planemo upload commit 3675b4447d11fb1cd75d505886e1bf693f9d07f5
yating-l
parents:
diff changeset
9 AACGATCGGAAAATTGGTAAGTAAATAATTAAAAATATTATATCTTTGGT
e35a3509c160 planemo upload commit 3675b4447d11fb1cd75d505886e1bf693f9d07f5
yating-l
parents:
diff changeset
10 >contig4 | 757£763.ii215ôii225Stanke, M. and Waack
e35a3509c160 planemo upload commit 3675b4447d11fb1cd75d505886e1bf693f9d07f5
yating-l
parents:
diff changeset
11 AAAACTAATTTTATCAAAATCGGACAACTATATCATATAGCTGCCATACG
e35a3509c160 planemo upload commit 3675b4447d11fb1cd75d505886e1bf693f9d07f5
yating-l
parents:
diff changeset
12 AACGATCGGAAAATTGGTAAGTAAATAATTAAAAATATTATATCTTTGGT