Mercurial > repos > yating-l > ucsc_blat
changeset 9:a9d863528f48 draft
planemo upload commit 3ca568027e928fda034876935132a6dddaf1943f
author | yating-l |
---|---|
date | Tue, 10 Jul 2018 13:04:09 -0400 |
parents | 7532cec01999 |
children | c449963debd5 |
files | blat.xml tool_dependencies.xml |
diffstat | 2 files changed, 3 insertions(+), 17 deletions(-) [+] |
line wrap: on
line diff
--- a/blat.xml Mon Jul 09 17:53:40 2018 -0400 +++ b/blat.xml Tue Jul 10 13:04:09 2018 -0400 @@ -1,5 +1,5 @@ <?xml version="1.0"?> -<tool id="ucsc_blat" name="UCSC BLAT Alignment Tool" version="1.1"> +<tool id="ucsc_blat" name="UCSC BLAT Alignment Tool" version="1.2"> <description>Standalone blat sequence search command line tool</description> <requirements> <requirement type="package" version="1.0">ucsc_tools_340_for_BLAT</requirement>
--- a/tool_dependencies.xml Mon Jul 09 17:53:40 2018 -0400 +++ b/tool_dependencies.xml Tue Jul 10 13:04:09 2018 -0400 @@ -8,20 +8,6 @@ - pslCDnaFilter --> <package name="ucsc_tools_340_for_BLAT" version="1.0"> - <install version="1.0"> - <actions_group> - <actions architecture="x86_64" os="linux"> - <action type="download_by_url">http://old-gep.wustl.edu/~galaxy/package_ucsc_tools_340_for_BLAT.tar.gz</action> - <action type="move_directory_files"> - <source_directory>.</source_directory> - <destination_directory>$INSTALL_DIR/bin</destination_directory> - </action> - </actions> - <action type="set_environment"> - <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> - </action> - </actions_group> - </install> - <readme>The tools and utilities were created by the UCSC Genome Bioinformatics Group</readme> + <repository changeset_revision="b57fd6b3736c" name="package_ucsc_blat_340" owner="yating-l" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> -</tool_dependency> \ No newline at end of file +</tool_dependency>