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author yating-l
date Wed, 16 May 2018 18:37:23 -0400
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1 Galaxy wrapper for UCSC pslCheck tool (version: v340)
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2 ==========================================================
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3 validate PSL files
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5 usage:
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6 -------
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8 $ pslCheck fileTbl(s)
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10 options:
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12 -pass=pslFile - write PSLs without errors to this file
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14 -targetSizes=sizesFile - tab file with columns of target and size.
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16 If specified, psl is check to have a valid target and target
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17 coordinates.
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19 -querySizes=sizesFile - file with query sizes.
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21 Source code:
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22 -------------
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24 http://hgdownload.cse.ucsc.edu/admin/exe/
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26 Licence
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27 -------
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28 Please note that commercial download and installation of the Blat and In-Silico PCR software may be licensed through Kent Informatics (http://www.kentinformatics.com).