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annotate README.rst @ 0:bfcdabc062ca draft

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit d4e9fe61901a612c78d9f26f172537b27fd2ddbb
author yhoogstrate
date Wed, 26 Aug 2015 11:04:47 -0400
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bfcdabc062ca planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit d4e9fe61901a612c78d9f26f172537b27fd2ddbb
yhoogstrate
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1 CrossMap wrapper for Galaxy
bfcdabc062ca planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit d4e9fe61901a612c78d9f26f172537b27fd2ddbb
yhoogstrate
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2 ===========================
bfcdabc062ca planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit d4e9fe61901a612c78d9f26f172537b27fd2ddbb
yhoogstrate
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3
bfcdabc062ca planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit d4e9fe61901a612c78d9f26f172537b27fd2ddbb
yhoogstrate
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4 CrossMap is versatile tool to convert genome coordinates or annotation files between genome
bfcdabc062ca planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit d4e9fe61901a612c78d9f26f172537b27fd2ddbb
yhoogstrate
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5 assemblies. It supports mostly commonly used file types, including BAM, BED,BigWig, GFF,
bfcdabc062ca planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit d4e9fe61901a612c78d9f26f172537b27fd2ddbb
yhoogstrate
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6 GTF, SAM, Wiggle, and VCF formats. For large plain text file types, such as BED, GFF, GTF
bfcdabc062ca planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit d4e9fe61901a612c78d9f26f172537b27fd2ddbb
yhoogstrate
parents:
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7 and VCF, reading from remote servers and file compression are supported.