Mercurial > repos > yhoogstrate > flaimapper
diff flaimapper-gtf-from-fasta.xml @ 1:96d135d3c57f draft
planemo upload for repository https://bitbucket.org/EMCbioinf/galaxy-tool-shed-tools/raw/master/flaimapper commit 18c2fff1b59feb43640d744444d8fb6193def183-dirty
| author | yhoogstrate |
|---|---|
| date | Wed, 03 Jun 2015 07:57:12 -0400 |
| parents | d6abffbc9ee7 |
| children | 8faba9df2791 |
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--- a/flaimapper-gtf-from-fasta.xml Thu May 21 07:26:46 2015 -0400 +++ b/flaimapper-gtf-from-fasta.xml Wed Jun 03 07:57:12 2015 -0400 @@ -1,9 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="flaimapper-gtf-from-fasta" name="FlaiMapper: extract GTF from FASTA" version="1.1.5.b"> +<tool id="flaimapper-gtf-from-fasta" name="FlaiMapper: extract GTF from FASTA" version="1.2.1.w1"> <description>Extract GTF file from FASTA file (as FlaiMapper reference).</description> <requirements> - <requirement type="package" version="0.8.2.1">pysam</requirement> - <requirement type="package" version="1.1.5">flaimapper</requirement> + <requirement type="package" version="1.2.1">flaimapper</requirement> </requirements> <stdio> @@ -32,9 +31,9 @@ <tests> <test> - <param name="fasta" value="ncrnadb09.fa" ftype="fasta" /> + <param name="fasta" value="test3/ncrnadb09.fa" ftype="fasta" /> - <output name="output" file="ncrnadb09.gtf" /> + <output name="output" file="test3/reference.gtf" /> </test> </tests>