Mercurial > repos > yhoogstrate > fuma

comparison test-data/edgren_test_04_unspecific_matching_output.txt @ 9:b21145d59d9c draft default tip

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/fuma commit 7bf6f3629e96bcaaed8770badd11366889efa99c
author erasmusmc
date Mon, 23 Jan 2017 09:41:08 -0500
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8:8366a8c82a7a 9:b21145d59d9c
1 Left-genes Right-genes Spans large gene (>200000bp) edgren_fusion-map.txt edgren_true_positives.txt
2 NR_120540 UBA2 FALSE TRUE FALSE
3 NR_024091:ZFP91:ZFP91-CNTF LINC00261 FALSE TRUE FALSE
4 FAT3 CASC5 TRUE TRUE FALSE
5 FAM208B FAM208B FALSE TRUE FALSE
6 FRMD4A FRMD4A TRUE TRUE FALSE
7 NM_001291876:NM_001291877:TACC2 RPLP1 TRUE TRUE FALSE
8 GHITM EEF1A1 FALSE TRUE FALSE
9 NM_001286806:NM_001286807:SLC25A30 NDE1 FALSE TRUE FALSE
10 YAF2 RYBP FALSE TRUE FALSE
11 GALNT6 GALNT6 FALSE TRUE FALSE
12 NM_001290002:NM_001290004:NR_120486:NR_120487:ZNF385A NR_120486:NR_120487:ZNF385A FALSE TRUE FALSE
13 PUS1 POR FALSE TRUE FALSE
14 NM_001159287:TPI1 MLLT6 FALSE TRUE FALSE
15 KRT80 NM_001293212:NM_001293213:NM_001293214:NM_001293215:NM_001293216:NR_120608:TUBB FALSE TRUE FALSE
16 RPLP0 EEF1A1 FALSE TRUE FALSE
17 ZNF609 LY6E FALSE TRUE FALSE
18 TEKT4P2 BRWD1 FALSE TRUE FALSE
19 AATF HNRNPK FALSE TRUE FALSE
20 MRPL38 MAP1LC3A FALSE TRUE FALSE
21 MED1 ACSF2:NM_001288968:NM_001288969:NM_001288970:NM_001288971:NM_001288972:NR_110232 FALSE TRUE FALSE
22 ARHGAP27:NM_001282290 ARHGAP27:NM_001282290 FALSE TRUE FALSE
23 BCAS3 MED13 TRUE TRUE FALSE
24 BPTF AMZ2:NM_001289054:NM_001289056 FALSE TRUE FALSE
25 CARD14 CARD14 FALSE TRUE FALSE
26 RPL26 PDCD2 FALSE TRUE FALSE
27 MYH11:NDE1 EIF2A FALSE TRUE FALSE
28 VPS35 PPP3R1 FALSE TRUE FALSE
29 GATAD2A GATAD2A:NM_001300946 FALSE TRUE FALSE
30 PLD3 NM_001291311:PLD3 FALSE TRUE FALSE
31 DPY19L3 ARFIP1:NM_001287431:NM_001287432:NM_001287433 FALSE TRUE FALSE
32 ZNF317 EEF1A1 FALSE TRUE FALSE
33 BCL2L13:NR_073068:NR_073069 NR_031672:SPTAN1 TRUE TRUE FALSE
34 HMGN2 ESYT1 FALSE TRUE FALSE
35 LOC644961:TMEM222 ACTG1:NR_037688 FALSE TRUE FALSE
36 SARS ME2 FALSE TRUE FALSE
37 NOS1AP C1orf226 TRUE TRUE FALSE
38 KISS1 GOLT1A FALSE TRUE FALSE
39 CC2D1B DTYMK FALSE TRUE FALSE
40 SYTL1 HSP90AB1 FALSE TRUE FALSE
41 PAK2 MAGEA10:MAGEA10-MAGEA5 FALSE TRUE FALSE
42 TMCC1 TMCC1 TRUE TRUE FALSE
43 HPS3:NM_001308258:NR_046371 CP:NR_046371 FALSE TRUE FALSE
44 RSRC1 RSRC1 TRUE TRUE FALSE
45 GREB1 GREB1 FALSE TRUE FALSE
46 NR_130784 NR_037904:SCLY TRUE TRUE FALSE
47 PNKD:TMBIM1 PNKD:TMBIM1 FALSE TRUE FALSE
48 PTMA RGL2 FALSE TRUE FALSE
49 SLC30A5 AZIN1:NM_001301668 FALSE TRUE FALSE
50 NM_001286052:NM_001286053:NM_001286054:NM_001289931:NR_110527:ZNF595:ZNF718 PSPH FALSE TRUE FALSE
51 INIP C5 FALSE TRUE FALSE
52 RALGPS1 RALGPS1 TRUE TRUE FALSE
53 SYNJ2BP:SYNJ2BP-COX16 NDUFA1 FALSE TRUE FALSE
54 NEDD8:NEDD8-MDP1 NEDD8:NEDD8-MDP1 FALSE TRUE FALSE
55 YLPM1 ITPK1 FALSE TRUE FALSE
56 LAMP1 MCF2L2 TRUE FALSE TRUE
57 PPP1R12A SEPT10 FALSE FALSE TRUE
58 CPNE1:NM_001198863:NR_037188 PI3 FALSE FALSE TRUE
59 ITCH DHX35 FALSE FALSE TRUE
60 NM_001303457:TTI1 DIDO1 FALSE FALSE TRUE
61 NFS1 PREX1 TRUE FALSE TRUE
62 CEP250 NM_001281771:NM_001281772:NM_001281773:NM_001281774:NM_001281775:NM_001281776:NM_001281777:NM_001281778:NM_001281779:NM_001281780:NM_001281781:NM_001281782:NM_001281783:NM_001281784:ZMYND8 FALSE FALSE TRUE
63 SETD3 CCDC85C FALSE FALSE TRUE
64 CYTH1 EIF3H FALSE FALSE TRUE
65 STARD3 DOK5:NM_177959 FALSE FALSE TRUE
66 IKZF3:NM_001284514:NM_001284515 NR_036633:VAPB FALSE FALSE TRUE
67 BCAS3 BCAS4 TRUE FALSE TRUE
68 SNF8 NM_001272060:RPS6KB1 FALSE FALSE TRUE
69 VMP1 NM_001272060:RPS6KB1 FALSE FALSE TRUE
70 BSG NFIX FALSE FALSE TRUE
71 MYO9B RAB22A FALSE FALSE TRUE
72 CMTM7 GLB1 FALSE FALSE TRUE
73 NUP214 NOTCH1 FALSE FALSE TRUE
74 ZNF704 WDR67 TRUE FALSE TRUE
75 SULF2 ARFGEF2 FALSE TRUE TRUE
76 RARA PKIA FALSE TRUE TRUE
77 GSDMB TATDN1 FALSE TRUE TRUE
78 ACACA STAC2 TRUE TRUE TRUE
79 MYO19 SKA2 FALSE TRUE TRUE
80 ANKHD1:ANKHD1-EIF4EBP3 PCDH1 FALSE TRUE TRUE