Mercurial > repos > yhoogstrate > fuma
diff test-data/edgren_test_04_unspecific_matching_output.txt @ 9:b21145d59d9c draft default tip
planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/fuma commit 7bf6f3629e96bcaaed8770badd11366889efa99c
| author | erasmusmc |
|---|---|
| date | Mon, 23 Jan 2017 09:41:08 -0500 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/edgren_test_04_unspecific_matching_output.txt Mon Jan 23 09:41:08 2017 -0500 @@ -0,0 +1,80 @@ +Left-genes Right-genes Spans large gene (>200000bp) edgren_fusion-map.txt edgren_true_positives.txt +NR_120540 UBA2 FALSE TRUE FALSE +NR_024091:ZFP91:ZFP91-CNTF LINC00261 FALSE TRUE FALSE +FAT3 CASC5 TRUE TRUE FALSE +FAM208B FAM208B FALSE TRUE FALSE +FRMD4A FRMD4A TRUE TRUE FALSE +NM_001291876:NM_001291877:TACC2 RPLP1 TRUE TRUE FALSE +GHITM EEF1A1 FALSE TRUE FALSE +NM_001286806:NM_001286807:SLC25A30 NDE1 FALSE TRUE FALSE +YAF2 RYBP FALSE TRUE FALSE +GALNT6 GALNT6 FALSE TRUE FALSE +NM_001290002:NM_001290004:NR_120486:NR_120487:ZNF385A NR_120486:NR_120487:ZNF385A FALSE TRUE FALSE +PUS1 POR FALSE TRUE FALSE +NM_001159287:TPI1 MLLT6 FALSE TRUE FALSE +KRT80 NM_001293212:NM_001293213:NM_001293214:NM_001293215:NM_001293216:NR_120608:TUBB FALSE TRUE FALSE +RPLP0 EEF1A1 FALSE TRUE FALSE +ZNF609 LY6E FALSE TRUE FALSE +TEKT4P2 BRWD1 FALSE TRUE FALSE +AATF HNRNPK FALSE TRUE FALSE +MRPL38 MAP1LC3A FALSE TRUE FALSE +MED1 ACSF2:NM_001288968:NM_001288969:NM_001288970:NM_001288971:NM_001288972:NR_110232 FALSE TRUE FALSE +ARHGAP27:NM_001282290 ARHGAP27:NM_001282290 FALSE TRUE FALSE +BCAS3 MED13 TRUE TRUE FALSE +BPTF AMZ2:NM_001289054:NM_001289056 FALSE TRUE FALSE +CARD14 CARD14 FALSE TRUE FALSE +RPL26 PDCD2 FALSE TRUE FALSE +MYH11:NDE1 EIF2A FALSE TRUE FALSE +VPS35 PPP3R1 FALSE TRUE FALSE +GATAD2A GATAD2A:NM_001300946 FALSE TRUE FALSE +PLD3 NM_001291311:PLD3 FALSE TRUE FALSE +DPY19L3 ARFIP1:NM_001287431:NM_001287432:NM_001287433 FALSE TRUE FALSE +ZNF317 EEF1A1 FALSE TRUE FALSE +BCL2L13:NR_073068:NR_073069 NR_031672:SPTAN1 TRUE TRUE FALSE +HMGN2 ESYT1 FALSE TRUE FALSE +LOC644961:TMEM222 ACTG1:NR_037688 FALSE TRUE FALSE +SARS ME2 FALSE TRUE FALSE +NOS1AP C1orf226 TRUE TRUE FALSE +KISS1 GOLT1A FALSE TRUE FALSE +CC2D1B DTYMK FALSE TRUE FALSE +SYTL1 HSP90AB1 FALSE TRUE FALSE +PAK2 MAGEA10:MAGEA10-MAGEA5 FALSE TRUE FALSE +TMCC1 TMCC1 TRUE TRUE FALSE +HPS3:NM_001308258:NR_046371 CP:NR_046371 FALSE TRUE FALSE +RSRC1 RSRC1 TRUE TRUE FALSE +GREB1 GREB1 FALSE TRUE FALSE +NR_130784 NR_037904:SCLY TRUE TRUE FALSE +PNKD:TMBIM1 PNKD:TMBIM1 FALSE TRUE FALSE +PTMA RGL2 FALSE TRUE FALSE +SLC30A5 AZIN1:NM_001301668 FALSE TRUE FALSE +NM_001286052:NM_001286053:NM_001286054:NM_001289931:NR_110527:ZNF595:ZNF718 PSPH FALSE TRUE FALSE +INIP C5 FALSE TRUE FALSE +RALGPS1 RALGPS1 TRUE TRUE FALSE +SYNJ2BP:SYNJ2BP-COX16 NDUFA1 FALSE TRUE FALSE +NEDD8:NEDD8-MDP1 NEDD8:NEDD8-MDP1 FALSE TRUE FALSE +YLPM1 ITPK1 FALSE TRUE FALSE +LAMP1 MCF2L2 TRUE FALSE TRUE +PPP1R12A SEPT10 FALSE FALSE TRUE +CPNE1:NM_001198863:NR_037188 PI3 FALSE FALSE TRUE +ITCH DHX35 FALSE FALSE TRUE +NM_001303457:TTI1 DIDO1 FALSE FALSE TRUE +NFS1 PREX1 TRUE FALSE TRUE +CEP250 NM_001281771:NM_001281772:NM_001281773:NM_001281774:NM_001281775:NM_001281776:NM_001281777:NM_001281778:NM_001281779:NM_001281780:NM_001281781:NM_001281782:NM_001281783:NM_001281784:ZMYND8 FALSE FALSE TRUE +SETD3 CCDC85C FALSE FALSE TRUE +CYTH1 EIF3H FALSE FALSE TRUE +STARD3 DOK5:NM_177959 FALSE FALSE TRUE +IKZF3:NM_001284514:NM_001284515 NR_036633:VAPB FALSE FALSE TRUE +BCAS3 BCAS4 TRUE FALSE TRUE +SNF8 NM_001272060:RPS6KB1 FALSE FALSE TRUE +VMP1 NM_001272060:RPS6KB1 FALSE FALSE TRUE +BSG NFIX FALSE FALSE TRUE +MYO9B RAB22A FALSE FALSE TRUE +CMTM7 GLB1 FALSE FALSE TRUE +NUP214 NOTCH1 FALSE FALSE TRUE +ZNF704 WDR67 TRUE FALSE TRUE +SULF2 ARFGEF2 FALSE TRUE TRUE +RARA PKIA FALSE TRUE TRUE +GSDMB TATDN1 FALSE TRUE TRUE +ACACA STAC2 TRUE TRUE TRUE +MYO19 SKA2 FALSE TRUE TRUE +ANKHD1:ANKHD1-EIF4EBP3 PCDH1 FALSE TRUE TRUE