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changeset 14:744987262771

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Uploaded
author cshl-bsr
date Wed, 30 Mar 2016 12:15:03 -0400
parents 391ea77bd930
children 28cebcc7f774
files cshl_rRNA_BED.loc.sample
diffstat 1 files changed, 19 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/cshl_rRNA_BED.loc.sample	Wed Mar 30 12:15:03 2016 -0400
@@ -0,0 +1,19 @@
+##
+## Location of rRNA BED files
+##
+## Format is:
+##  value<TAB>Name<TAB>dbkey<TAB>ID
+##
+##  Name can contain spaces
+
+#/localdata1/annotations/BED_files/rRNA/hg19_rmsk_rRNA.bed	hg38 repeatMasker rRNA	hg38	hg38_rRNA
+/localdata1/annotations/BED_files/rRNA/hg19_rmsk_rRNA.bed	hg19 repeatMasker rRNA	hg19	hg19_rRNA
+/localdata1/annotations/BED_files/rRNA/hg18_rmsk_rRNA.bed	hg18 repeatMasker rRNA	hg18	hg18_rRNA
+/localdata1/annotations/BED_files/rRNA/mm10_rmsk_rRNA.bed	mm10 repeatMasker rRNA	mm10	mm10_rRNA
+/localdata1/annotations/BED_files/rRNA/mm9_rmsk_rRNA.bed	mm9 repeatMasker rRNA	mm9	mm9_rRNA
+#/localdata1/annotations/BED_files/rRNA/dm6_rmsk_rRNA.bed	dm6 repeatMasker rRNA	dm6	dm6_rRNA
+/localdata1/annotations/BED_files/rRNA/dm3_rmsk_rRNA.bed	dm3 repeatMasker rRNA	dm3	dm3_rRNA
+/localdata1/annotations/BED_files/rRNA/rn5_rmsk_rRNA.bed	rn5 repeatMasker rRNA	rn5	rn5_rRNA
+#/localdata1/annotations/BED_files/rRNA/rn4_rmsk_rRNA.bed	rn4 repeatMasker rRNA	rn4	rn4_rRNA
+#/localdata1/annotations/BED_files/rRNA/ce6_rmsk_rRNA.bed	ce6 repeatMasker rRNA	ce6	ce6_rRNA
+#/localdata1/annotations/BED_files/rRNA/ce10_rmsk_rRNA.bed	ce10 repeatMasker rRNA	ce10	ce10_rRNA
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