Mercurial > repos > yufei-luo > differential_expression_analysis_pipeline_for_rnaseq_data
diff deseq/differential_expression_analysis_pipeline_for_rnaseq_data-a03838a6eb54/DiffExpAnal/DESeqTools/histoRawp.R @ 10:6e573fd3c41b draft
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author | yufei-luo |
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date | Mon, 13 May 2013 10:06:30 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/deseq/differential_expression_analysis_pipeline_for_rnaseq_data-a03838a6eb54/DiffExpAnal/DESeqTools/histoRawp.R Mon May 13 10:06:30 2013 -0400 @@ -0,0 +1,19 @@ +# Marie-Anges Dillies +# histoRawp +# histogram of raw p-values + +# input : res, OUT_histoRawpName +# output : histogram (png) + + +histoRawp <- function( res, OUT_histoRawpName, out = TRUE ){ + + if (out) png( file=OUT_histoRawpName ) + + ind <- grep("val", colnames(res)) + hist( res[,ind], nclass=50, xlab="Raw p-values", main="", col="skyblue" ) + + if (out) dev.off() +} + +