Mercurial > repos > yufei-luo > differential_expression_analysis_pipeline_for_rnaseq_data
diff deseq/differential_expression_analysis_pipeline_for_rnaseq_data-a03838a6eb54/DiffExpAnal/loadHTSeqResultFiles.xml @ 10:6e573fd3c41b draft
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author | yufei-luo |
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date | Mon, 13 May 2013 10:06:30 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/deseq/differential_expression_analysis_pipeline_for_rnaseq_data-a03838a6eb54/DiffExpAnal/loadHTSeqResultFiles.xml Mon May 13 10:06:30 2013 -0400 @@ -0,0 +1,29 @@ +<tool id="load_HTSeqResultFiles" name="load HTSeqResultFiles" > + <description>To load several HTSeq result files from different conditions.</description> + <command interpreter="python"> loadHTSeqResultFiles.py -o $htseqRes_out + -i + #for $i in $condition_groups + #for $j in $i.replicates + $j.tabular_file + #end for + @ + #end for + +</command> + <inputs> + <repeat name="condition_groups" title="Condition group" min="2"> + <repeat name="replicates" title="Replicate"> + <param name="tabular_file" format="tabular" type="data" label="TABULAR file."/> + </repeat> + </repeat> + </inputs> + + <outputs> + <data format="txt" name="htseqRes_out" label="HTSeq result files" help="This program gives you a list of files you choose for the following data analysis."/> + +</outputs> +<help> +</help> + +</tool> +