Mercurial > repos > yufei-luo > differential_expression_analysis_pipeline_for_rnaseq_data
view deseq/differential_expression_analysis_pipeline_for_rnaseq_data-a03838a6eb54/DiffExpAnal/listInputs.xml @ 10:6e573fd3c41b draft
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author | yufei-luo |
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date | Mon, 13 May 2013 10:06:30 -0400 |
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<tool id="listInputs" name="listInputs"> <description>Give a list of input files from different conditions/groups for DESeq analysis, DESeq can then charge these input files from the given list.</description> <command interpreter="perl"> listInputs.pl $inputFromGroup1 $inputFromGroup2 $output </command> <inputs> <param name="inputFromGroup1" type="data" format="tabular" label="Please choose your file from group1."/> <param name="inputFromGroup2" type="data" format="tabular" label="Please choose your file from group2."/> </inputs> <outputs> <data format="txt" name="output" label="listInputs Output"/> </outputs> <help> This tool can facilate the the chargement for DESeq tool. Example: From group1, we have input1. From group2, we have input2. This tool will give us a list like: fileID=1 input1 group1 fileID=2 input2 group2 Where the value of fileID is unique for each input file. </help> </tool>