Mercurial > repos > yufei-luo > s_mart
annotate SMART/galaxy/FindOverlaps_optim.xml @ 6:769e306b7933
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| author | yufei-luo |
|---|---|
| date | Fri, 18 Jan 2013 04:54:14 -0500 |
| parents | |
| children |
| rev | line source |
|---|---|
| 6 | 1 <tool id="findOverlaps" name="findOverlaps"> |
| 2 <description>Finds the overlapped reference reads.</description> | |
| 3 <command interpreter="python"> | |
| 4 ../Java/Python/FindOverlaps_optim.py -i $inputRef -j $inputQ -o $outputFileGff | |
| 5 </command> | |
| 6 | |
| 7 <inputs> | |
| 8 <param name="inputRef" type="data" label="Input Reference File" format="gff3"/> | |
| 9 <param name="inputQ" type="data" label="Input Query File" format="gff3"/> | |
| 10 </inputs> | |
| 11 | |
| 12 <outputs> | |
| 13 <data name="outputFileGff" format="gff3"/> | |
| 14 </outputs> | |
| 15 | |
| 16 </tool> |