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1 import unittest
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2 import os
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3 from commons.core.utils.FileUtils import FileUtils
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4
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5 TestF_PATH = os.environ['REPET_PATH'] + '/SMART/Java/Python/TestFiles'
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6
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7
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8 class Test_F_plot(unittest.TestCase):
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9
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10 def setUp(self):
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11 self.outputFileName = "testOut.png"
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12
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13 def tearDown(self):
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14 os.remove(self.outputFileName)
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15
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16 def test_run_default_option(self):
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17 cmd = "python ../plot.py -i %s/mapperAnalyzerOutput.gff3 -f gff3 -x identity -y nbMismatches -s line -o %s " % (TestF_PATH, self.outputFileName)
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18 os.system(cmd)
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19 self.assertTrue(FileUtils.isRessourceExists(self.outputFileName))
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20
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21 def test_run_log_option(self):
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22 cmd = "python ../plot.py -i %s/mapperAnalyzerOutput.gff3 -f gff3 -x identity -y nbMismatches -s line -o %s -l xy" % (TestF_PATH, self.outputFileName)
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23 os.system(cmd)
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24 self.assertTrue(FileUtils.isRessourceExists(self.outputFileName))
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25
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26 def test_run_z_xDefault_yDefault_heatPoints_option(self):
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27 cmd = "python ../plot.py -i %s/testPlot.gff3 -f gff3 -x value1 -X 1 -y value2 -Y 1 -z value3 -s heatPoints -o %s -v 10 " % (TestF_PATH, self.outputFileName)
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28 os.system(cmd)
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29 self.assertTrue(FileUtils.isRessourceExists(self.outputFileName))
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30
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31 def test_points_option(self):
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32 cmd = "python ../plot.py -i %s/testPlot.gff3 -f gff3 -x value1 -X 1 -y value2 -Y 1 -s points -o %s -v 10 " % (TestF_PATH, self.outputFileName)
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33 os.system(cmd)
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34 self.assertTrue(FileUtils.isRessourceExists(self.outputFileName))
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35
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36 def test_xDefault_points_option(self):
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37 cmd = "python ../plot.py -i %s/testPlot.gff3 -f gff3 -x value1 -X 1 -n 2 -s barplot -o %s -v 10 " % (TestF_PATH, self.outputFileName)
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38 os.system(cmd)
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39 self.assertTrue(FileUtils.isRessourceExists(self.outputFileName))
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40
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41 if __name__ == "__main__":
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42 unittest.main() |
