Mercurial > repos > yufei-luo > s_mart

annotate SMART/DiffExpAnal/listInputs.xml @ 33:aa0420172fc6

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author m-zytnicki
date Tue, 30 Apr 2013 14:34:53 -0400
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1 <tool id="listInputs" name="listInputs">
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2 <description>Give a list of input files from different conditions/groups for DESeq analysis, DESeq can then charge these input files from the given list.</description>
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3 <command interpreter="perl"> listInputs.pl $inputFromGroup1 $inputFromGroup2 $output
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4 </command>
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6 <inputs>
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7 <param name="inputFromGroup1" type="data" format="tabular" label="Please choose your file from group1."/>
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8 <param name="inputFromGroup2" type="data" format="tabular" label="Please choose your file from group2."/>
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9 </inputs>
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11 <outputs>
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12 <data format="txt" name="output" label="listInputs Output"/>
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13 </outputs>
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15 <help>
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16 This tool can facilate the the chargement for DESeq tool.
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17 Example:
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18 From group1, we have input1.
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19 From group2, we have input2.
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20 This tool will give us a list like:
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21 fileID=1 input1 group1
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22 fileID=2 input2 group2
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23 Where the value of fileID is unique for each input file.
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24 </help>
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25 </tool>