Mercurial > repos > yufei-luo > s_mart

annotate smart_toolShed/commons/core/sql/test/Test_TableJobAdaptatorFactory.py @ 0:e0f8dcca02ed

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Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
author yufei-luo
date Thu, 17 Jan 2013 10:52:14 -0500
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e0f8dcca02ed Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
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1 import os
e0f8dcca02ed Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
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2 import unittest
e0f8dcca02ed Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
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3 from commons.core.sql.TableJobAdaptatorFactory import TableJobAdaptatorFactory
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4 from commons.core.sql.DbFactory import DbFactory
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e0f8dcca02ed Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
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6 class Test_TableJobAdaptatorFactory(unittest.TestCase):
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8 def test_createInstance_SGE(self):
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9 REPET_JOB_MANAGER_Initial_Value = os.environ["REPET_JOB_MANAGER"]
e0f8dcca02ed Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
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10 os.environ["REPET_JOB_MANAGER"] = "SGE"
e0f8dcca02ed Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
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11 instance = TableJobAdaptatorFactory.createInstance(DbFactory.createInstance(), "dummyJobTable")
e0f8dcca02ed Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
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12 obsClassName = instance.__class__.__name__
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13 expClassName = "TableJobAdaptatorSGE"
e0f8dcca02ed Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
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14 os.environ["REPET_JOB_MANAGER"] = REPET_JOB_MANAGER_Initial_Value
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15 self.assertEquals(expClassName, obsClassName)
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17 def test_createInstance_Torque(self):
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18 REPET_JOB_MANAGER_Initial_Value = os.environ["REPET_JOB_MANAGER"]
e0f8dcca02ed Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
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19 os.environ["REPET_JOB_MANAGER"] = "Torque"
e0f8dcca02ed Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
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20 instance = TableJobAdaptatorFactory.createInstance(DbFactory.createInstance(), "dummyJobTable")
e0f8dcca02ed Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
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21 obsClassName = instance.__class__.__name__
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22 expClassName = "TableJobAdaptatorTorque"
e0f8dcca02ed Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
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23 os.environ["REPET_JOB_MANAGER"] = REPET_JOB_MANAGER_Initial_Value
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24 self.assertEquals(expClassName, obsClassName)
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26 if __name__ == "__main__":
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27 unittest.main()