comparison SMART/DiffExpAnal/countNumber.xml @ 31:0ab839023fe4

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author m-zytnicki
date Tue, 30 Apr 2013 14:33:21 -0400
parents 94ab73e8a190
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30:5677346472b5 31:0ab839023fe4
1 <tool id="countNumber" name="countNumber">
2 <description>Calculate the number of reads(annotations) overlapping for each transcript.</description>
3 <command interpreter="perl"> countNumber.pl $input $outputCSV
4 </command>
5
6 <inputs>
7 <param name="input" type="data" format="gff3" label="Please choose your gff3 format file (which contains the number of overlaps)."/>
8 </inputs>
9
10 <outputs>
11 <data format="csv" name="outputCSV" label="countNumber Output"/>
12 </outputs>
13
14 <help>
15 </help>
16 </tool>