Mercurial > repos > yufei-luo > s_mart
comparison SMART/bacteriaRegulatoryRegion_Detection/sortGff.xml @ 18:94ab73e8a190
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| author | m-zytnicki |
|---|---|
| date | Mon, 29 Apr 2013 03:20:15 -0400 |
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| children |
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| 17:b0e8584489e6 | 18:94ab73e8a190 |
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| 1 <tool id="sortGff" name="sortGff"> | |
| 2 <description>Sorts a gff file.</description> | |
| 3 <command interpreter="perl"> sortGff.pl -i $inputFile > $outputFile </command> | |
| 4 <inputs> | |
| 5 <param name="inputFile" type="data" label="Input File" format="gff"/> | |
| 6 </inputs> | |
| 7 | |
| 8 <outputs> | |
| 9 <data format="gff3" name="outputFile" label="[sortGff] Output File"/> | |
| 10 </outputs> | |
| 11 | |
| 12 <help> | |
| 13 command example: perl sortGff.pl -i *_unsort.gff3 > *_sort.gff3 | |
| 14 </help> | |
| 15 </tool> |