Mercurial > repos > yufei-luo > s_mart
diff SMART/bacteriaRegulatoryRegion_Detection/sortGff.xml @ 18:94ab73e8a190
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author | m-zytnicki |
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date | Mon, 29 Apr 2013 03:20:15 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/SMART/bacteriaRegulatoryRegion_Detection/sortGff.xml Mon Apr 29 03:20:15 2013 -0400 @@ -0,0 +1,15 @@ +<tool id="sortGff" name="sortGff"> + <description>Sorts a gff file.</description> + <command interpreter="perl"> sortGff.pl -i $inputFile > $outputFile </command> + <inputs> + <param name="inputFile" type="data" label="Input File" format="gff"/> + </inputs> + + <outputs> + <data format="gff3" name="outputFile" label="[sortGff] Output File"/> + </outputs> + + <help> + command example: perl sortGff.pl -i *_unsort.gff3 > *_sort.gff3 + </help> +</tool>