comparison smart_toolShed/SMART/Java/WindowsRegistry.java @ 0:e0f8dcca02ed

Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
author yufei-luo
date Thu, 17 Jan 2013 10:52:14 -0500
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-1:000000000000 0:e0f8dcca02ed
1 import java.lang.reflect.InvocationTargetException;
2 import java.lang.reflect.Method;
3 import java.util.HashMap;
4 import java.util.Map;
5 import java.util.ArrayList;
6 import java.util.List;
7 import java.util.prefs.Preferences;
8
9 public class WindowsRegistry {
10 public static final int HKEY_CURRENT_USER = 0x80000001;
11 public static final int HKEY_LOCAL_MACHINE = 0x80000002;
12 public static final int REG_SUCCESS = 0;
13 public static final int REG_NOTFOUND = 2;
14 public static final int REG_ACCESSDENIED = 5;
15
16 private static final int KEY_ALL_ACCESS = 0xf003f;
17 private static final int KEY_READ = 0x20019;
18 private static Preferences userRoot = Preferences.userRoot();
19 private static Preferences systemRoot = Preferences.systemRoot();
20 private static Class<? extends Preferences> userClass = userRoot.getClass();
21 private static Method regOpenKey = null;
22 private static Method regCloseKey = null;
23 private static Method regQueryValueEx = null;
24 private static Method regEnumValue = null;
25 private static Method regQueryInfoKey = null;
26 private static Method regEnumKeyEx = null;
27 private static Method regCreateKeyEx = null;
28 private static Method regSetValueEx = null;
29 private static Method regDeleteKey = null;
30 private static Method regDeleteValue = null;
31
32 static {
33 try {
34 regOpenKey = userClass.getDeclaredMethod("WindowsRegOpenKey",
35 new Class[] { int.class, byte[].class, int.class });
36 regOpenKey.setAccessible(true);
37 regCloseKey = userClass.getDeclaredMethod("WindowsRegCloseKey",
38 new Class[] { int.class });
39 regCloseKey.setAccessible(true);
40 regQueryValueEx = userClass.getDeclaredMethod("WindowsRegQueryValueEx",
41 new Class[] { int.class, byte[].class });
42 regQueryValueEx.setAccessible(true);
43 regEnumValue = userClass.getDeclaredMethod("WindowsRegEnumValue",
44 new Class[] { int.class, int.class, int.class });
45 regEnumValue.setAccessible(true);
46 regQueryInfoKey = userClass.getDeclaredMethod("WindowsRegQueryInfoKey1",
47 new Class[] { int.class });
48 regQueryInfoKey.setAccessible(true);
49 regEnumKeyEx = userClass.getDeclaredMethod(
50 "WindowsRegEnumKeyEx", new Class[] { int.class, int.class,
51 int.class });
52 regEnumKeyEx.setAccessible(true);
53 regCreateKeyEx = userClass.getDeclaredMethod(
54 "WindowsRegCreateKeyEx", new Class[] { int.class,
55 byte[].class });
56 regCreateKeyEx.setAccessible(true);
57 regSetValueEx = userClass.getDeclaredMethod(
58 "WindowsRegSetValueEx", new Class[] { int.class,
59 byte[].class, byte[].class });
60 regSetValueEx.setAccessible(true);
61 regDeleteValue = userClass.getDeclaredMethod(
62 "WindowsRegDeleteValue", new Class[] { int.class,
63 byte[].class });
64 regDeleteValue.setAccessible(true);
65 regDeleteKey = userClass.getDeclaredMethod(
66 "WindowsRegDeleteKey", new Class[] { int.class,
67 byte[].class });
68 regDeleteKey.setAccessible(true);
69 }
70 catch (Exception e) {
71 e.printStackTrace();
72 }
73 }
74
75 private WindowsRegistry() { }
76
77 /**
78 * Read a value from key and value name
79 * @param hkey HKEY_CURRENT_USER/HKEY_LOCAL_MACHINE
80 * @param key
81 * @param valueName
82 * @return the value
83 * @throws IllegalArgumentException
84 * @throws IllegalAccessException
85 * @throws InvocationTargetException
86 */
87 public static String readString(int hkey, String key, String valueName)
88 throws IllegalArgumentException, IllegalAccessException,
89 InvocationTargetException
90 {
91 if (hkey == HKEY_LOCAL_MACHINE) {
92 return readString(systemRoot, hkey, key, valueName);
93 }
94 else if (hkey == HKEY_CURRENT_USER) {
95 return readString(userRoot, hkey, key, valueName);
96 }
97 else {
98 throw new IllegalArgumentException("hkey=" + hkey);
99 }
100 }
101
102 /**
103 * Read value(s) and value name(s) form given key
104 * @param hkey HKEY_CURRENT_USER/HKEY_LOCAL_MACHINE
105 * @param key
106 * @return the value name(s) plus the value(s)
107 * @throws IllegalArgumentException
108 * @throws IllegalAccessException
109 * @throws InvocationTargetException
110 */
111 public static Map<String, String> readStringValues(int hkey, String key)
112 throws IllegalArgumentException, IllegalAccessException,
113 InvocationTargetException
114 {
115 if (hkey == HKEY_LOCAL_MACHINE) {
116 return readStringValues(systemRoot, hkey, key);
117 }
118 else if (hkey == HKEY_CURRENT_USER) {
119 return readStringValues(userRoot, hkey, key);
120 }
121 else {
122 throw new IllegalArgumentException("hkey=" + hkey);
123 }
124 }
125
126 /**
127 * Read the value name(s) from a given key
128 * @param hkey HKEY_CURRENT_USER/HKEY_LOCAL_MACHINE
129 * @param key
130 * @return the value name(s)
131 * @throws IllegalArgumentException
132 * @throws IllegalAccessException
133 * @throws InvocationTargetException
134 */
135 public static List<String> readStringSubKeys(int hkey, String key)
136 throws IllegalArgumentException, IllegalAccessException,
137 InvocationTargetException
138 {
139 if (hkey == HKEY_LOCAL_MACHINE) {
140 return readStringSubKeys(systemRoot, hkey, key);
141 }
142 else if (hkey == HKEY_CURRENT_USER) {
143 return readStringSubKeys(userRoot, hkey, key);
144 }
145 else {
146 throw new IllegalArgumentException("hkey=" + hkey);
147 }
148 }
149
150 /**
151 * Create a key
152 * @param hkey HKEY_CURRENT_USER/HKEY_LOCAL_MACHINE
153 * @param key
154 * @throws IllegalArgumentException
155 * @throws IllegalAccessException
156 * @throws InvocationTargetException
157 */
158 public static void createKey(int hkey, String key)
159 throws IllegalArgumentException, IllegalAccessException,
160 InvocationTargetException
161 {
162 int [] ret;
163 if (hkey == HKEY_LOCAL_MACHINE) {
164 ret = createKey(systemRoot, hkey, key);
165 regCloseKey.invoke(systemRoot, new Object[] { new Integer(ret[0]) });
166 }
167 else if (hkey == HKEY_CURRENT_USER) {
168 ret = createKey(userRoot, hkey, key);
169 regCloseKey.invoke(userRoot, new Object[] { new Integer(ret[0]) });
170 }
171 else {
172 throw new IllegalArgumentException("hkey=" + hkey);
173 }
174 if (ret[1] != REG_SUCCESS) {
175 throw new IllegalArgumentException("rc=" + ret[1] + " key=" + key);
176 }
177 }
178
179 /**
180 * Write a value in a given key/value name
181 * @param hkey
182 * @param key
183 * @param valueName
184 * @param value
185 * @throws IllegalArgumentException
186 * @throws IllegalAccessException
187 * @throws InvocationTargetException
188 */
189 public static void writeStringValue
190 (int hkey, String key, String valueName, String value)
191 throws IllegalArgumentException, IllegalAccessException,
192 InvocationTargetException
193 {
194 if (hkey == HKEY_LOCAL_MACHINE) {
195 writeStringValue(systemRoot, hkey, key, valueName, value);
196 }
197 else if (hkey == HKEY_CURRENT_USER) {
198 writeStringValue(userRoot, hkey, key, valueName, value);
199 }
200 else {
201 throw new IllegalArgumentException("hkey=" + hkey);
202 }
203 }
204
205 /**
206 * Delete a given key
207 * @param hkey
208 * @param key
209 * @throws IllegalArgumentException
210 * @throws IllegalAccessException
211 * @throws InvocationTargetException
212 */
213 public static void deleteKey(int hkey, String key)
214 throws IllegalArgumentException, IllegalAccessException,
215 InvocationTargetException
216 {
217 int rc = -1;
218 if (hkey == HKEY_LOCAL_MACHINE) {
219 rc = deleteKey(systemRoot, hkey, key);
220 }
221 else if (hkey == HKEY_CURRENT_USER) {
222 rc = deleteKey(userRoot, hkey, key);
223 }
224 if (rc != REG_SUCCESS) {
225 throw new IllegalArgumentException("rc=" + rc + " key=" + key);
226 }
227 }
228
229 /**
230 * delete a value from a given key/value name
231 * @param hkey
232 * @param key
233 * @param value
234 * @throws IllegalArgumentException
235 * @throws IllegalAccessException
236 * @throws InvocationTargetException
237 */
238 public static void deleteValue(int hkey, String key, String value)
239 throws IllegalArgumentException, IllegalAccessException,
240 InvocationTargetException
241 {
242 int rc = -1;
243 if (hkey == HKEY_LOCAL_MACHINE) {
244 rc = deleteValue(systemRoot, hkey, key, value);
245 }
246 else if (hkey == HKEY_CURRENT_USER) {
247 rc = deleteValue(userRoot, hkey, key, value);
248 }
249 if (rc != REG_SUCCESS) {
250 throw new IllegalArgumentException("rc=" + rc + " key=" + key + " value=" + value);
251 }
252 }
253
254 // =====================
255
256 private static int deleteValue
257 (Preferences root, int hkey, String key, String value)
258 throws IllegalArgumentException, IllegalAccessException,
259 InvocationTargetException
260 {
261 int[] handles = (int[]) regOpenKey.invoke(root, new Object[] {
262 new Integer(hkey), toCstr(key), new Integer(KEY_ALL_ACCESS) });
263 if (handles[1] != REG_SUCCESS) {
264 return handles[1]; // can be REG_NOTFOUND, REG_ACCESSDENIED
265 }
266 int rc =((Integer) regDeleteValue.invoke(root,
267 new Object[] {
268 new Integer(handles[0]), toCstr(value)
269 })).intValue();
270 regCloseKey.invoke(root, new Object[] { new Integer(handles[0]) });
271 return rc;
272 }
273
274 private static int deleteKey(Preferences root, int hkey, String key)
275 throws IllegalArgumentException, IllegalAccessException,
276 InvocationTargetException
277 {
278 int rc =((Integer) regDeleteKey.invoke(root,
279 new Object[] { new Integer(hkey), toCstr(key) })).intValue();
280 return rc; // can REG_NOTFOUND, REG_ACCESSDENIED, REG_SUCCESS
281 }
282
283 private static String readString(Preferences root, int hkey, String key, String value)
284 throws IllegalArgumentException, IllegalAccessException,
285 InvocationTargetException
286 {
287 int[] handles = (int[]) regOpenKey.invoke(root, new Object[] {
288 new Integer(hkey), toCstr(key), new Integer(KEY_READ) });
289 if (handles[1] != REG_SUCCESS) {
290 return null;
291 }
292 byte[] valb = (byte[]) regQueryValueEx.invoke(root, new Object[] {
293 new Integer(handles[0]), toCstr(value) });
294 regCloseKey.invoke(root, new Object[] { new Integer(handles[0]) });
295 return (valb != null ? new String(valb).trim() : null);
296 }
297
298 private static Map<String,String> readStringValues
299 (Preferences root, int hkey, String key)
300 throws IllegalArgumentException, IllegalAccessException,
301 InvocationTargetException
302 {
303 HashMap<String, String> results = new HashMap<String,String>();
304 int[] handles = (int[]) regOpenKey.invoke(root, new Object[] {
305 new Integer(hkey), toCstr(key), new Integer(KEY_READ) });
306 if (handles[1] != REG_SUCCESS) {
307 return null;
308 }
309 int[] info = (int[]) regQueryInfoKey.invoke(root,
310 new Object[] { new Integer(handles[0]) });
311
312 int count = info[2]; // count
313 int maxlen = info[3]; // value length max
314 for(int index=0; index<count; index++) {
315 byte[] name = (byte[]) regEnumValue.invoke(root, new Object[] {
316 new Integer
317 (handles[0]), new Integer(index), new Integer(maxlen + 1)});
318 String value = readString(hkey, key, new String(name));
319 results.put(new String(name).trim(), value);
320 }
321 regCloseKey.invoke(root, new Object[] { new Integer(handles[0]) });
322 return results;
323 }
324
325 private static List<String> readStringSubKeys
326 (Preferences root, int hkey, String key)
327 throws IllegalArgumentException, IllegalAccessException,
328 InvocationTargetException
329 {
330 List<String> results = new ArrayList<String>();
331 int[] handles = (int[]) regOpenKey.invoke(root, new Object[] {
332 new Integer(hkey), toCstr(key), new Integer(KEY_READ)
333 });
334 if (handles[1] != REG_SUCCESS) {
335 return null;
336 }
337 int[] info = (int[]) regQueryInfoKey.invoke(root,
338 new Object[] { new Integer(handles[0]) });
339
340 int count = info[2]; // count
341 int maxlen = info[3]; // value length max
342 for(int index=0; index<count; index++) {
343 byte[] name = (byte[]) regEnumKeyEx.invoke(root, new Object[] {
344 new Integer
345 (handles[0]), new Integer(index), new Integer(maxlen + 1)
346 });
347 results.add(new String(name).trim());
348 }
349 regCloseKey.invoke(root, new Object[] { new Integer(handles[0]) });
350 return results;
351 }
352
353 private static int [] createKey(Preferences root, int hkey, String key)
354 throws IllegalArgumentException, IllegalAccessException,
355 InvocationTargetException
356 {
357 return (int[]) regCreateKeyEx.invoke(root,
358 new Object[] { new Integer(hkey), toCstr(key) });
359 }
360
361 private static void writeStringValue
362 (Preferences root, int hkey, String key, String valueName, String value)
363 throws IllegalArgumentException, IllegalAccessException,
364 InvocationTargetException
365 {
366 int[] handles = (int[]) regOpenKey.invoke(root, new Object[] {
367 new Integer(hkey), toCstr(key), new Integer(KEY_ALL_ACCESS) });
368
369 regSetValueEx.invoke(root,
370 new Object[] {
371 new Integer(handles[0]), toCstr(valueName), toCstr(value)
372 });
373 regCloseKey.invoke(root, new Object[] { new Integer(handles[0]) });
374 }
375
376 // utility
377 private static byte[] toCstr(String str) {
378 byte[] result = new byte[str.length() + 1];
379
380 for (int i = 0; i < str.length(); i++) {
381 result[i] = (byte) str.charAt(i);
382 }
383 result[str.length()] = 0;
384 return result;
385 }
386 }
387