Mercurial > repos > yufei-luo > s_mart
comparison smart_toolShed/SMART/galaxy/restrictSequenceList.xml @ 0:e0f8dcca02ed
Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
| author | yufei-luo |
|---|---|
| date | Thu, 17 Jan 2013 10:52:14 -0500 |
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| -1:000000000000 | 0:e0f8dcca02ed |
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| 1 <tool id="restrictSequenceList" name="restrict sequence list"> | |
| 2 <description>Keep the elements of a list of sequences whose name is mentionned in a given file.</description> | |
| 3 <command interpreter="python"> ../Java/Python/restrictSequenceList.py -i $inputFile -f fasta -n $name -o $outputFile </command> | |
| 4 | |
| 5 <inputs> | |
| 6 <param name="inputFile" type="data" label="Input fasta File" format="fasta"/> | |
| 7 <param name="name" type="data" label="The txt file contains the names of the transcripts." format="txt"/> | |
| 8 </inputs> | |
| 9 | |
| 10 <outputs> | |
| 11 <data format="fasta" name="outputFile" label="[restrictSequenceList] Output File"/> | |
| 12 </outputs> | |
| 13 | |
| 14 <help> | |
| 15 </help> | |
| 16 </tool> |