Mercurial > repos > yufei-luo > s_mart

diff SMART/galaxy/mergeTranscriptLists.xml @ 15:440ceca58672

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Uploaded
author m-zytnicki
date Mon, 22 Apr 2013 11:08:07 -0400
parents 769e306b7933
children 94ab73e8a190
line wrap: on
line diff
--- a/SMART/galaxy/mergeTranscriptLists.xml	Fri Apr 19 10:13:11 2013 -0400
+++ b/SMART/galaxy/mergeTranscriptLists.xml	Mon Apr 22 11:08:07 2013 -0400
@@ -45,9 +45,6 @@
 		#end if	
 		
 		-o $outputFileGff 
-		
-	
-
 	</command>
 
 	<inputs>
@@ -145,4 +142,9 @@
 		<data name="outputFileGff" format="gff3" label="[mergeTranscriptLists]out file"/>
 	</outputs> 
 	
+	<help>
+The script is similar to *compare overlapping*, except that when data of two different sets overlap, they are merged. You can use the same parameters as *compare overlapping* and use them to look for transcription on both strands, for example.
+
+Optionally, you can also add to the output all the elements from the first set which do not overlap with the second set.
+	</help>
 </tool>