Mercurial > repos > althonos > gecco

annotate test-data/BGC0001866.sideload.json @ 20:64b724dd8d04 draft

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Regenerate Galaxy test files with Pyrodigal `v2.1.0`
author althonos
date Mon, 27 Mar 2023 13:32:49 +0000
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64b724dd8d04 Regenerate Galaxy test files with Pyrodigal `v2.1.0`
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1 {
64b724dd8d04 Regenerate Galaxy test files with Pyrodigal `v2.1.0`
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2 "records": [
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3 {
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4 "name": "BGC0001866.1",
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5 "subregions": [
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6 {
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7 "details": {
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8 "alkaloid_probability": "0.010",
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9 "average_p": "0.996",
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10 "max_p": "1.000",
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11 "nrp_probability": "0.140",
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12 "polyketide_probability": "0.960",
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13 "ripp_probability": "0.000",
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14 "saccharide_probability": "0.000",
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15 "terpene_probability": "0.010"
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16 },
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17 "end": 32979,
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18 "label": "Polyketide",
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19 "start": 347
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20 }
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21 ]
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22 }
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23 ],
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24 "tool": {
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25 "configuration": {
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26 "cds": "3",
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27 "e-filter": "None",
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28 "edge-distance": "0",
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29 "mask": "False",
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30 "no-pad": "False",
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31 "p-filter": "1e-09",
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32 "postproc": "'gecco'",
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33 "threshold": "0.8"
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34 },
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35 "description": "Biosynthetic Gene Cluster prediction with Conditional Random Fields.",
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36 "name": "GECCO",
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37 "version": "0.9.6"
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38 }
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39 }