Mercurial > repos > bimib > cobraxy

changeset 68:d5dd7e863488 draft

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Uploaded
author luca_milaz
date Sun, 13 Oct 2024 09:03:19 +0000
parents 1f928ad6a87e
children 067d3487ce58
files COBRAxy/ras_to_bounds.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/COBRAxy/ras_to_bounds.xml	Sun Oct 13 09:01:06 2024 +0000
+++ b/COBRAxy/ras_to_bounds.xml	Sun Oct 13 09:03:19 2024 +0000
@@ -33,7 +33,7 @@
             #for $input_temp in $cond_ras.input_ras:
                 #set $names = $names + $input_temp.element_identifier + ","
             #end for
-            --name $names
+            --names $names
         #end if
         --out_log $log
         ]]>
@@ -104,7 +104,7 @@
 Example for multiple RAS matrices:
     - cancer.csv and normal.csv generated by RAS generator tool (the two class names are 'cancer' and 'normal').
     - This tool returns one unique collection of bounds files for both cancer and normal cells (normalization is performed across all cells).
-    - The association cell-class is reported in the 'cell_class' file that is udesul to perform flux enrichment analysis based on class partenrship.
+    - The association cell-class is reported in the 'cell_class' file that is useful to perform flux enrichment analysis based on class partenrship.
 
 Output:
 -------------