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changeset 6:6d54abd510d7 draft

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planemo upload commit 93e677982c3636da455de2f827a87e516c7985ac-dirty
author bioitcore
date Wed, 13 Sep 2017 15:11:27 -0400
parents c6b0f5c3f3b4
children 37a16ff93dd9
files chimerascan.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/chimerascan.xml	Wed Sep 13 15:07:06 2017 -0400
+++ b/chimerascan.xml	Wed Sep 13 15:11:27 2017 -0400
@@ -2,7 +2,7 @@
     <description>A tool for identifying chimeric transcription in sequencing data.</description>
     <command detect_errors="exit_code"><![CDATA[
             bash $__tool_directory__/run.sh $__tool_directory__ &&
-            python chimerascan_run.py -p 8 myindex
+            python $__tool_directory__/chimerascan_run.py -p 8 $__tool_directory__/myindex
             #if $input_type_conditional.chimerascan_input_type == "paired"
                     $input_type_conditional.input_1 $input_type_conditional.input_2
             #else