Mercurial > repos > blankenberg > package_pybamtools_0_0_1
annotate tool_dependencies.xml @ 9:b4731df95f53
Update checkout revision.
| author | Daniel Blankenberg <dan@bx.psu.edu> |
|---|---|
| date | Fri, 30 Jan 2015 16:51:44 -0500 |
| parents | b6217f6ab3b5 |
| children | b1ffa753298f |
| rev | line source |
|---|---|
| 0 | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | |
| 3 <package name="pyBamTools" version="0.0.1"> | |
| 4 <install version="1.0"> | |
| 5 <actions> | |
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b4731df95f53
Update checkout revision.
Daniel Blankenberg <dan@bx.psu.edu>
parents:
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diff
changeset
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6 <action type="shell_command">hg clone -r 85ecc28d39c62ea9c1866dcb8e38a9b66d56cd0c https://bitbucket.org/dan/pybamtools pyBamTools</action> |
| 0 | 7 <action type="make_directory">$INSTALL_DIR/lib/python</action> |
| 8 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python && python setup.py install --home $INSTALL_DIR</action> | |
| 9 <action type="set_environment"> | |
| 4 | 10 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable> |
| 0 | 11 </action> |
| 12 </actions> | |
| 13 </install> | |
| 14 <readme> | |
| 15 Installs pyBamTools libraries. | |
| 16 </readme> | |
| 17 </package> | |
| 18 </tool_dependency> |