Mercurial > repos > brasset_jensen > srnapipe
view test-data/res_files/reads-sample-small.fastq/subgroups/bonafide_reads/bonafide_reads-TEs_reads_counts_nomismatches.txt @ 63:11708af40030 draft
planemo upload for repository https://github.com/GReD-Clermont/sRNAPipe/ commit a461e07471d3897046e14389171a2c03d09b912d
| author | pierre.pouchin |
|---|---|
| date | Thu, 24 Jan 2019 13:09:46 -0500 |
| parents | 9185ca0a7b43 |
| children |
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ID reads counts RPKM per million of piRNAs per million of miRNAs per million of bonafide reads sense reads counts reverse reads counts % of sense 1U % of sense 10A % of reverse 1U % of reverse 10A BATUMI_I 11 348.13 4708.90 1222222.22 3571.43 1 10 0 0 60 20 BATUMI_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 BS2 732 39075.58 313356.16 81333333.33 237662.34 146 586 43.1506849315069 42.4657534246575 14.5051194539249 32.0819112627986 COPIA_DM_I 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 COPIA_DM_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 DMCR1A 45 2537.08 19263.70 5000000.00 14610.39 11 34 45.4545454545455 54.5454545454545 17.6470588235294 52.9411764705882 DMRT1B 16 777.98 6849.32 1777777.78 5194.81 9 7 33.3333333333333 22.2222222222222 0 0 FW 1502 80675.24 642979.45 166888888.89 487662.34 274 1228 37.956204379562 62.4087591240876 14.9837133550489 27.3615635179153 G6_DM 204 25176.93 87328.77 22666666.67 66233.77 53 151 62.2641509433962 54.7169811320755 1.98675496688742 33.112582781457 Gypsy2-I_DM 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 Gypsy2-LTR_DM 21 15657.81 8989.73 2333333.33 6818.18 6 15 66.6666666666667 66.6666666666667 0 6.66666666666667 I_DM 2 93.79 856.16 222222.22 649.35 2 0 100 50 0 0 MAX_I 10 318.44 4280.82 1111111.11 3246.75 0 10 0 0 80 0 MAX_LTR 11 8636.07 4708.90 1222222.22 3571.43 5 6 20 0 0 33.3333333333333 PROTOP 7 393.78 2996.58 777777.78 2272.73 1 6 100 100 16.6666666666667 33.3333333333333 ZAM_I 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 ZAM_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0