Mercurial > repos > brasset_jensen > srnapipe
view test-data/res_files/reads-sample-small.fastq/subgroups/bonafide_reads/bonafide_reads-TEs_reads_counts_nomismatches.txt @ 61:9185ca0a7b43 draft
Updated package according to recommendations.
| author | pierre.pouchin |
|---|---|
| date | Wed, 16 Jan 2019 08:18:13 -0500 |
| parents | |
| children | 11708af40030 |
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ID reads counts RPKM per million of piRNAs per million of miRNAs per million of bonafide reads sense reads counts reverse reads counts % of sense 1U % of sense 10A % of reverse 1U % of reverse 10A BATUMI_I 59 189.79 2558.99 936507.94 1932.53 10 49 60 20 42.8571428571429 14.2857142857143 BATUMI_LTR 6 565.03 260.24 95238.10 196.53 1 5 100 0 0 60 BS2 7010 38034.19 304042.33 111269841.27 229610.22 1430 5580 44.1258741258741 40.4895104895105 16.0573476702509 31.326164874552 COPIA_DM_I 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 COPIA_DM_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 DMCR1A 315 1805.07 13662.39 5000000.00 10317.72 86 229 50 52.3255813953488 19.6506550218341 34.061135371179 DMRT1B 161 795.67 6983.00 2555555.56 5273.50 67 94 23.8805970149254 14.9253731343284 1.06382978723404 6.38297872340426 FW 15077 82308.96 653929.56 239317460.32 493842.12 2649 12428 39.7885994714987 57.115892789732 14.9581589958159 25.9736079819762 G6_DM 2055 25777.83 89130.81 32619047.62 67310.84 427 1628 54.8009367681499 49.1803278688525 2.08845208845209 29.8525798525799 Gypsy2-I_DM 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 Gypsy2-LTR_DM 191 14474.61 8284.18 3031746.03 6256.14 82 109 54.8780487804878 31.7073170731707 10.0917431192661 18.348623853211 I_DM 10 47.66 433.73 158730.16 327.55 6 4 50 33.3333333333333 50 0 MAX_I 84 271.88 3643.30 1333333.33 2751.39 15 69 86.6666666666667 6.66666666666667 73.9130434782609 15.9420289855072 MAX_LTR 57 4548.41 2472.24 904761.90 1867.02 22 35 36.3636363636364 9.09090909090909 0 54.2857142857143 PROTOP 83 474.56 3599.93 1317460.32 2718.64 26 57 42.3076923076923 65.3846153846154 17.5438596491228 36.8421052631579 ZAM_I 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 ZAM_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0