Mercurial > repos > brasset_jensen > srnapipe
diff test-data/res_files/reads-sample-small.fastq/subgroups/bonafide_reads/bonafide_reads-TEs_reads_counts_nomismatches.txt @ 61:9185ca0a7b43 draft
Updated package according to recommendations.
| author | pierre.pouchin |
|---|---|
| date | Wed, 16 Jan 2019 08:18:13 -0500 |
| parents | |
| children | 11708af40030 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/res_files/reads-sample-small.fastq/subgroups/bonafide_reads/bonafide_reads-TEs_reads_counts_nomismatches.txt Wed Jan 16 08:18:13 2019 -0500 @@ -0,0 +1,18 @@ +ID reads counts RPKM per million of piRNAs per million of miRNAs per million of bonafide reads sense reads counts reverse reads counts % of sense 1U % of sense 10A % of reverse 1U % of reverse 10A +BATUMI_I 59 189.79 2558.99 936507.94 1932.53 10 49 60 20 42.8571428571429 14.2857142857143 +BATUMI_LTR 6 565.03 260.24 95238.10 196.53 1 5 100 0 0 60 +BS2 7010 38034.19 304042.33 111269841.27 229610.22 1430 5580 44.1258741258741 40.4895104895105 16.0573476702509 31.326164874552 +COPIA_DM_I 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 +COPIA_DM_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 +DMCR1A 315 1805.07 13662.39 5000000.00 10317.72 86 229 50 52.3255813953488 19.6506550218341 34.061135371179 +DMRT1B 161 795.67 6983.00 2555555.56 5273.50 67 94 23.8805970149254 14.9253731343284 1.06382978723404 6.38297872340426 +FW 15077 82308.96 653929.56 239317460.32 493842.12 2649 12428 39.7885994714987 57.115892789732 14.9581589958159 25.9736079819762 +G6_DM 2055 25777.83 89130.81 32619047.62 67310.84 427 1628 54.8009367681499 49.1803278688525 2.08845208845209 29.8525798525799 +Gypsy2-I_DM 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 +Gypsy2-LTR_DM 191 14474.61 8284.18 3031746.03 6256.14 82 109 54.8780487804878 31.7073170731707 10.0917431192661 18.348623853211 +I_DM 10 47.66 433.73 158730.16 327.55 6 4 50 33.3333333333333 50 0 +MAX_I 84 271.88 3643.30 1333333.33 2751.39 15 69 86.6666666666667 6.66666666666667 73.9130434782609 15.9420289855072 +MAX_LTR 57 4548.41 2472.24 904761.90 1867.02 22 35 36.3636363636364 9.09090909090909 0 54.2857142857143 +PROTOP 83 474.56 3599.93 1317460.32 2718.64 26 57 42.3076923076923 65.3846153846154 17.5438596491228 36.8421052631579 +ZAM_I 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 +ZAM_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0