Mercurial > repos > brasset_jensen > srnapipe
view test-data/res_files/reads-sample-small.fastq/subgroups/bonafide_reads/bonafide_reads-TEs_reads_counts_mismatches.txt @ 61:9185ca0a7b43 draft
Updated package according to recommendations.
| author | pierre.pouchin |
|---|---|
| date | Wed, 16 Jan 2019 08:18:13 -0500 |
| parents | |
| children | 11708af40030 |
line wrap: on
line source
ID reads counts RPKM per million of piRNAs per million of miRNAs per million of bonafide reads sense reads counts reverse reads counts % of sense 1U % of sense 10A % of reverse 1U % of reverse 10A BATUMI_I 274 881.38 11884.11 4349206.35 8974.78 169 105 96.4497041420118 39.6449704142012 41.9047619047619 23.8095238095238 BATUMI_LTR 96 9040.50 4163.78 1523809.52 3144.45 3 93 66.6666666666667 0 2.1505376344086 39.7849462365591 BS2 227 1231.64 9845.59 3603174.60 7435.31 57 170 59.6491228070175 35.0877192982456 7.05882352941176 37.6470588235294 COPIA_DM_I 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 COPIA_DM_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 DMCR1A 78 446.97 3383.07 1238095.24 2554.86 7 71 85.7142857142857 42.8571428571429 23.943661971831 26.7605633802817 DMRT1B 216 1067.49 9368.49 3428571.43 7075.01 132 84 48.4848484848485 48.4848484848485 8.33333333333333 32.1428571428571 FW 91 496.79 3946.91 1444444.44 2980.67 31 60 70.9677419354839 80.6451612903226 8.33333333333333 31.6666666666667 G6_DM 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 Gypsy2-I_DM 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 Gypsy2-LTR_DM 4 303.13 173.49 63492.06 131.02 0 4 0 0 0 25 I_DM 38 181.12 1648.16 603174.60 1244.68 12 26 50 33.3333333333333 19.2307692307692 50 MAX_I 36 116.52 1561.42 571428.57 1179.17 15 21 60 6.66666666666667 23.8095238095238 23.8095238095238 MAX_LTR 45 3590.85 1951.77 714285.71 1473.96 12 33 0 91.6666666666667 9.09090909090909 3.03030303030303 PROTOP 127 726.13 5508.33 2015873.02 4159.84 55 72 65.4545454545455 63.6363636363636 27.7777777777778 23.6111111111111 ZAM_I 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0 ZAM_LTR 0 0.00 0.00 0.00 0.00 0 0 0 0 0 0