Mercurial > repos > brenninc > xdirectory_reader_limited_by_data_table
diff README @ 0:ccabef3f7d5f draft
Uploaded first version
author | brenninc |
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date | Sun, 08 May 2016 11:01:03 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README Sun May 08 11:01:03 2016 -0400 @@ -0,0 +1,32 @@ +This tool will lookup files on the Galaxy server machine, including mounted directories. + +The user aspects of the tool are explained in the help section of data_reader.xml + +Only directories that are included in the white list and not in the black list are allowed. + +The white and black lists can be changed without the requirement to restart the server as these are read from the tools install directory each time the tool is run. + +==== + +The white list is tool-data/white-list.ini + +Any directory that starts with any entry from this file will be considered to have passed. + +The default file includes a single / so all absolute paths will pass. + +==== + +The black list is tool-data/black-list.ini + +Any directory that contains any of the blacklisted strings anywhere in the path are excluded. + +The default file excludes most of the standard linux systems directories where data is unlikely to be found. + +It also excludes the /galaxy/ pattern to avoid users getting access to galaxy files. + +Also .. and ~ are excluded for security reasons. + + + + +