Mercurial > repos > cheanney > db2db
view db2db.xml @ 3:d4e959143115 draft
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author | cheanney |
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date | Tue, 07 Jul 2015 13:02:00 -0400 |
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children | 0895298631ea |
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<tool id="db2db" name="db2db" version="1.0"> <description></description> <command interpreter="/usr/bin/php"> /mnt/webrepo/fr-s-bsg-bio-d/htdocs/biodbnet_wrapper/db2dbRestClient.php input='$input' inputValues='$inputValues' outputs='$output' taxonId='$taxon' fileType='$filetype' > $result </command> <inputs> <param name="input" type="text" size="30" label="Enter an input ID name" /> <param name="inputValues" type="text" area="true" size="4x40" label="Paste input ID value(s)" /> <param name="output" type="text" size="30" label="Enter an output ID name(s)" /> <param name="taxon" size="30" type="text" label="Enter a taxon id (optional)" /> <param name="filetype" type="select" label="fileType options"> <option value="table">table</option> <option value="xml">xml</option> <option value="json">json</option> </param> </inputs> <outputs> <data format="html" name="result" label="db2db.results"> <change_format> <when input="filetype" value=“xml” format=“xml” /> <when input="filetype" value=“json” format=“json” /> </change_format> </data> </outputs> <help> .. class:: infomark **What it does** Add instructions here. ----- **Usage** /mnt/webrepo/fr-s-bsg-bio-d/htdocs/biodbnet_wrapper/db2dbClient.php input='Ensembl Gene ID' inputValues='ENSG00000121410, ENSG00000171428' ouptput='Gene Symbol, Ensembl Protein ID' taxonId='9606'(optional) </help> </tool>