annotate essential_climate_variables.xml @ 4:9ee8db6ffba3 draft

planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit baa781f07f0e18447f1f211c75b1b5b9540d4479
author climate
date Sun, 07 Jul 2019 10:06:53 -0400
parents b261160f10ee
children ee42b7a33dc7
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5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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1 <tool id="cds_essential_variability" name="Copernicus Essential Climate Variables" version="0.1.4">
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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2 <description>for assessing climate variability</description>
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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3 <requirements>
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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4 <requirement type="package" version="3">python</requirement>
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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5 <requirement type="package" version="0.1.4">cdsapi</requirement>
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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6 <requirement type="package" version="1.9.6">cdo</requirement>
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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7 </requirements>
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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8 <command detect_errors="exit_code"><![CDATA[
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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9 HOME=`pwd` &&
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10 cp \$COPERNICUS_CDSAPIRC_KEY_FILE .cdsapirc | true &&
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5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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11 python3 '$__tool_directory__/ecv_retrieve.py'
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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12 'ecv-for-climate-change' '$variable'
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13 --month '$month'
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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14 #if str($product_type.product) == 'monthly_mean'
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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15 --year '$product_type.year'
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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16 --time_aggregation '1_month'
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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17 #else if str($product_type.product) == 'anomaly'
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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18 --time_aggregation '$product_type.selector'
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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19 --year '$product_type.year'
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5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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20 #else
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21 --year '2018'
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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22 --time_aggregation '1_month'
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5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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23 #end if
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24 --product_type '$product_type.product'
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5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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25 --format 'tgz' --output 'tmp.tgz'
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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26 --verbose &&
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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27 tar zxvf tmp.tgz &&
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b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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28 cat *.grib > tmpg.grib &&
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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29 cdo remapcon,$adv.resol -setgridtype,regular tmpg.grib tmp.grib &&
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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30 cdo -f nc -t ecmwf copy tmp.grib tmp.nc
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5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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31 ]]></command>
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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32 <inputs>
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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33 <param name="variable" type="select" multiple="true" label="Variable(s)">
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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34 <option value="surface_air_temperature" selected="true">Surface air temperature</option>
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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35 <option value="surface_air_relative_humidity" selected="true">Surface air relative humidity</option>
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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36 <option value="0_7cm_volumetric_soil_moisture" selected="true">0-7cm volumetric soil moisture</option>
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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37 <option value="precipitation" selected="true">Precipitation</option>
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38 <option value="sea_ice_cover" selected="true">Sea-ice cover</option>
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5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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39 </param>
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40 <conditional name="product_type">
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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41 <param name="product" type="select" label="Select type of data">
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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42 <option value="monthly_mean" selected="true">Monthly mean</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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43 <option value="climatology">Climatology</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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44 <option value="anomaly">Anomaly</option>
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5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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45 </param>
2
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46 <when value="monthly_mean">
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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47 <param name="year" type="select" multiple="true" label="Select year(s)">
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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48 <option value="1979">1979</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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49 <option value="1980">1980</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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50 <option value="1981">1981</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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51 <option value="1982">1982</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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52 <option value="1983">1983</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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53 <option value="1984">1984</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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54 <option value="1985">1985</option>
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55 <option value="1986">1986</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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56 <option value="1987">1987</option>
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57 <option value="1988">1988</option>
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58 <option value="1989">1989</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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59 <option value="1990">1990</option>
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60 <option value="1991">1991</option>
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61 <option value="1992">1992</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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62 <option value="1993">1993</option>
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63 <option value="1994">1994</option>
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64 <option value="1995">1995</option>
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65 <option value="1996">1996</option>
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66 <option value="1997">1997</option>
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67 <option value="1998">1998</option>
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68 <option value="1999">1999</option>
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69 <option value="2000">2000</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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70 <option value="2001">2001</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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71 <option value="2002">2002</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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72 <option value="2003">2003</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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73 <option value="2004">2004</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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74 <option value="2005">2005</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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75 <option value="2006">2006</option>
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76 <option value="2007">2007</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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77 <option value="2008">2008</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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78 <option value="2009">2009</option>
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79 <option value="2010">2010</option>
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80 <option value="2011">2011</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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81 <option value="2012">2012</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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82 <option value="2013">2013</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
diff changeset
83 <option value="2014">2014</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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84 <option value="2015">2015</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
diff changeset
85 <option value="2016">2016</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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86 <option value="2017">2017</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
diff changeset
87 <option value="2018">2018</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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88 <option value="2019" selected="true">2019</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
diff changeset
89 </param>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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90 </when>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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91 <when value="anomaly">
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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92 <param name="year" type="select" multiple="true" label="Select year(s)">
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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93 <option value="1979">1979</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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94 <option value="1980">1980</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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95 <option value="1981">1981</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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96 <option value="1982">1982</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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97 <option value="1983">1983</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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98 <option value="1984">1984</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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99 <option value="1985">1985</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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100 <option value="1986">1986</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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101 <option value="1987">1987</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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102 <option value="1988">1988</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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103 <option value="1989">1989</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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104 <option value="1990">1990</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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105 <option value="1991">1991</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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106 <option value="1992">1992</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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107 <option value="1993">1993</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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108 <option value="1994">1994</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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109 <option value="1995">1995</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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110 <option value="1996">1996</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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111 <option value="1997">1997</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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112 <option value="1998">1998</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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113 <option value="1999">1999</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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114 <option value="2000">2000</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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parents: 1
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115 <option value="2001">2001</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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parents: 1
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116 <option value="2002">2002</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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117 <option value="2003">2003</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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118 <option value="2004">2004</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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parents: 1
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119 <option value="2005">2005</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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parents: 1
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120 <option value="2006">2006</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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121 <option value="2007">2007</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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122 <option value="2008">2008</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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123 <option value="2009">2009</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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124 <option value="2010">2010</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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125 <option value="2011">2011</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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126 <option value="2012">2012</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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127 <option value="2013">2013</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
climate
parents: 1
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128 <option value="2014">2014</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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parents: 1
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129 <option value="2015">2015</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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parents: 1
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130 <option value="2016">2016</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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parents: 1
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131 <option value="2017">2017</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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132 <option value="2018" selected="true">2018</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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133 </param>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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134 <param name="selector" type="select" label="Time aggregation">
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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135 <option value="12_month" selected="true">yearly</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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136 <option value="1_month">monthly</option>
0
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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137 </param>
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138 </when>
5c0ab9932311 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 49926d09bb7d28f07b24050d25c40f2ae875d6f7
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139 </conditional>
2
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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140 <param name="month" type="select" multiple="true" label="Select month(s)">
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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141 <option value="01" selected="true">January</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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142 <option value="02" selected="true">February</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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parents: 1
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143 <option value="03" selected="true">March</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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144 <option value="04" selected="true">April</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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145 <option value="05" selected="true">May</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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146 <option value="06" selected="true">June</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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147 <option value="07" selected="true">July</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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148 <option value="08" selected="true">August</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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149 <option value="09" selected="true">September</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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150 <option value="10" selected="true">October</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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151 <option value="11" selected="true">November</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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152 <option value="12" selected="true">December</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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153 </param>
0
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154
2
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155 <section name="adv" title="Advanced Options" expanded="false">
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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156 <param name="resol" type="select" label="Resolution">
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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157 <option value="r1440x720" selected="true">high</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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158 <option value="r144x72">low</option>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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159 </param>
b9d9fe0c2ce7 planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/essential_climate_variables commit 6045302c39c9c11fb6a73966a364cc395f2f9b28
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160 </section>
0
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161 </inputs>
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162 <outputs>
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163 <data name="ofilename" format="netcdf" from_work_dir="tmp.nc"/>
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164 </outputs>
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165 <tests>
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166 <test>
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167 <param name="variable" value="0_7cm_volumetric_soil_moisture"/>
2
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168 <conditional name="product_type">
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169 <param name="product" value="monthly_mean"/>
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170 <param name="year" value="2018"/>
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171 </conditional>
0
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172 <param name="month" value="12"/>
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173 <param name="resol" value="r144x72"/>
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174 <output name="ofilename" ftype="netcdf" file="soil_moisture.nc" compare="sim_size" delta="100"/>
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175 </test>
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176 <test>
2
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177 <param name="variable" value="precipitation"/>
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178 <conditional name="product_type">
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179 <param name="product" value="anomaly"/>
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180 <param name="year" value="2017"/>
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181 <param name="time_aggregation" value="12_month"/>
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182 </conditional>
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183 <param name="month" value="12"/>
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184 <param name="resol" value="r144x72"/>
0
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185 <output name="ofilename" ftype="netcdf" file="prep_seaice.nc" compare="sim_size" delta="100"/>
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186 </test>
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187 </tests>
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188 <help><![CDATA[
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189
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190 **Copernicus Essential climate variables for assessment of climate variability from 1979 to present**
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191 =======================================================================================================
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192
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193 This tool is a wrapper to retrieve Copernicus Essential Climate Variables.
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194 It corresponds to the European Contribution to the Monitoring of Essential Climate Variables from Space.
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195 An Essential Climate Variable is a physical, chemical or biological variable or a group of linked variables
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196 that critically contributes to the characterization of Earth’ s climate.
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197
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198 The Essential Climate Variables for assessment of climate variability from 1979 to present dataset contains
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199 a selection of climatologies and monthly anomalies of Essential Climate Variables (ECVs) suitable for
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200 monitoring and assessment of climate variability and change. Selection criteria are based on accuracy
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201 and temporal consistency on monthly to decadal time scales. The ECV data products in this set have been
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202 estimated from multiple sources and, depending on the source, may have been adjusted to account for biases
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203 and other known deficiencies. Data sources and adjustment methods used are described in the Product User
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204 Guide, as are various particulars such as the baseline periods used to calculate monthly climatologies and
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205 the corresponding anomalies.
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206
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207
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208 - ECV Factsheets: https://gcos.wmo.int/en/essential-climate-variables/ecv-factsheets
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209 - Copernicus Climate Data Store documentation on Essential Climate Variables:
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210 https://cds.climate.copernicus.eu/cdsapp#!/dataset/ecv-for-climate-change?tab=overview
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211
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212 See climatedata.wmo.int/ for more information on Essential Climate Variables.
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213
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214 .. class:: infomark
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215
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216 It allows to retrieve estimates of Essential Climate Variables (ECVs)
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217 derived from Earth observations.
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218
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219 License:
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220 ~~~~~~~~
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221 Copernicus License V1.1
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222
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223 Generated using Copernicus Climate Change Service information [2019].
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224 Neither the European Commission nor ECMWF is responsible for any use
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225 that may be made of the Copernicus information or data it contains.
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226
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227 ]]></help>
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228 <citations>
1
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229 <citation type="doi">10.1002/qj.828</citation>
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230 <citation type="doi">10.1002/qj.2949</citation>
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231 </citations>
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232 </tool>