Mercurial > repos > climate > climate_stripes

annotate climate-stripes.xml @ 2:abdc27e01dca draft default tip

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planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit e4c144851549600ffde5bcf875304d5edd98e2b1
author climate
date Sat, 09 Jul 2022 09:02:01 +0000
parents c6f2435d680b
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
2
abdc27e01dca planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit e4c144851549600ffde5bcf875304d5edd98e2b1
climate
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diff changeset
1 <tool id="climate_stripes" name="climate stripes" version="1.0.2">
0
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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2 <description>from timeseries</description>
2
abdc27e01dca planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit e4c144851549600ffde5bcf875304d5edd98e2b1
climate
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3 <edam_topics>
abdc27e01dca planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit e4c144851549600ffde5bcf875304d5edd98e2b1
climate
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4 <edam_topic>topic_3855</edam_topic>
abdc27e01dca planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit e4c144851549600ffde5bcf875304d5edd98e2b1
climate
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5 <edam_topic>topic_3318</edam_topic>
abdc27e01dca planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit e4c144851549600ffde5bcf875304d5edd98e2b1
climate
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6 </edam_topics>
abdc27e01dca planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit e4c144851549600ffde5bcf875304d5edd98e2b1
climate
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7 <edam_operations>
abdc27e01dca planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit e4c144851549600ffde5bcf875304d5edd98e2b1
climate
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8 <edam_operation>operation_0337</edam_operation>
abdc27e01dca planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit e4c144851549600ffde5bcf875304d5edd98e2b1
climate
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9 </edam_operations>
0
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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10 <requirements>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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11 <requirement type="package" version="3">python</requirement>
2
abdc27e01dca planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit e4c144851549600ffde5bcf875304d5edd98e2b1
climate
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12 <requirement type="package" version="3.5.2">matplotlib</requirement>
abdc27e01dca planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit e4c144851549600ffde5bcf875304d5edd98e2b1
climate
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13 <requirement type="package" version="1.4.3">pandas</requirement>
0
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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14 </requirements>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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15 <command detect_errors="exit_code"><![CDATA[
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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16 python3 '$__tool_directory__/climate_stripes.py'
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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17 '$ifilename' '$variable'
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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18 --cmap '$adv.colormap'
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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19 #if str($title).strip()
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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20 --title '$title'
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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21 #end if
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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22 #if str($adv.xname).strip()
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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23 --xname '$adv.xname'
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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24 #end if
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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25 #if str($adv.format_date).strip()
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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26 --format_date '$adv.format_date'
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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27 #end if
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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28 #if str($adv.format_plot).strip()
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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29 --format_plot '$adv.format_plot'
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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30 #end if
2
abdc27e01dca planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit e4c144851549600ffde5bcf875304d5edd98e2b1
climate
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31 #if $adv.nxsplit
abdc27e01dca planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit e4c144851549600ffde5bcf875304d5edd98e2b1
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32 --nxsplit '$adv.nxsplit'
abdc27e01dca planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit e4c144851549600ffde5bcf875304d5edd98e2b1
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33 #end if
0
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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34 --output image.png
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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35 ]]></command>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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36 <inputs>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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37 <param name="ifilename" type="data" format="tabular" label="timeseries to plot"></param>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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38 <param name="variable" type="text" value="global" label="column name to use for plotting" />
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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39 <param name="title" type="text" value="" label="plot title" />
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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40 <section name="adv" title="Advanced Options" expanded="false">
2
abdc27e01dca planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit e4c144851549600ffde5bcf875304d5edd98e2b1
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41 <param name="nxsplit" type="integer" optional="true" label="number of values per intervals" />
0
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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42 <param name="xname" type="text" value="" label="column name to use for x-axis" />
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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43 <param name="format_date" type="text" value="" label="format for input date/time column" />
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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44 <param name="format_plot" type="text" value="" label="format for plotting dates on the x-axis" />
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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45 <param name="colormap" type="select">
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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46 <option value="Accent">Accent</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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47 <option value="Blues">Blues</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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48 <option value="BrBG">BrBG</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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49 <option value="BuGn">BuGn</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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50 <option value="BuPu">BuPu</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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51 <option value="CMRmap">CMRmap</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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52 <option value="Dark2">Dark2</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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53 <option value="GnBu">GnBu</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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54 <option value="Greens">Greens</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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55 <option value="Greys">Greys</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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56 <option value="OrRd">OrRd</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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57 <option value="Oranges">Oranges</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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58 <option value="PRGn">PRGn</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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59 <option value="Paired">Paired</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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60 <option value="Pastel1">Pastel1</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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61 <option value="Pastel2">Pastel2</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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62 <option value="PiYG">PiYG</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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63 <option value="PuBu">PuBu</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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64 <option value="PuBuGn">PuBuGn</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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65 <option value="PuOr">PuOr</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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66 <option value="PuRd">PuRd</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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67 <option value="Purples">Purples</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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68 <option value="RdBu">RdBu</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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69 <option value="RdGy">RdGy</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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70 <option value="RdPu">RdPu</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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71 <option value="RdBu_r" selected="true">RdBu_r</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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72 <option value="RdGy_r">RdGy_r</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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73 <option value="RdPu_r">RdPu_r</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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74 <option value="RdYlBu">RdYlBu</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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75 <option value="RdYlGn">RdYlGn</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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76 <option value="Reds">Reds</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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77 <option value="Set1">Set1</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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78 <option value="Set2">Set2</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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79 <option value="Set3">Set3</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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80 <option value="Spectral">Spectral</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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81 <option value="Wistia">Wistia</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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82 <option value="YlGn">YlGn</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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83 <option value="YlGnBu">YlGnBu</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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84 <option value="YlOrBr">YlOrBr</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
diff changeset
85 <option value="YlOrRd">YlOrRd</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
diff changeset
86 <option value="afmhot">afmhot</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
diff changeset
87 <option value="autumn">autumn</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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88 <option value="binary">binary</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
diff changeset
89 <option value="bone">bone</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
diff changeset
90 <option value="brg">brg</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
diff changeset
91 <option value="bwr">bwr</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
diff changeset
92 <option value="cool">cool</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
diff changeset
93 <option value="coolwarm">coolwarm</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
diff changeset
94 <option value="copper">copper</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
diff changeset
95 <option value="cubehelix">cubehelix</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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96 <option value="flag">flag</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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97 <option value="gist_earth">gist_earth</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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98 <option value="gist_gray">gist_gray</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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99 <option value="gist_heat">gist_heat</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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100 <option value="gist_ncar">gist_ncar</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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101 <option value="gist_rainbow">gist_rainbow</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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102 <option value="gist_stern">gist_stern</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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103 <option value="gist_yarg">gist_yarg</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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104 <option value="gnuplot">gnuplot</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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105 <option value="gnuplot2">gnuplot2</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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106 <option value="gray">gray</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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107 <option value="hot">hot</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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108 <option value="hsv">hsv</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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109 <option value="jet">jet</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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110 <option value="nipy_spectral">nipy_spectral</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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111 <option value="ocean">ocean</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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112 <option value="pink">pink</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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113 <option value="prism">prism</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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114 <option value="rainbow">rainbow</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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115 <option value="seismic">seismic</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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116 <option value="spring">spring</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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117 <option value="summer">summer</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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118 <option value="tab10">tab10</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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119 <option value="tab20">tab20</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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120 <option value="tab20b">tab20b</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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121 <option value="tab20c">tab20c</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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122 <option value="terrain">terrain</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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123 <option value="winter">winter</option>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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124 </param>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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125 </section>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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126 </inputs>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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127 <outputs>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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128 <data name="ofilename" format="png" from_work_dir="image.png"/>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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129 </outputs>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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130 <tests>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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131 <test>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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132 <param name="ifilename" value="T2Mclimatology.txt" />
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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133 <param name="variable" value="global" />
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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134 <output name="ofilename" ftype="png" file="T2Mstripes.png" compare="sim_size" delta="50"/>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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135 </test>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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136 <test>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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137 <param name="ifilename" value="T2Mclimatology.txt" />
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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138 <param name="variable" value="global" />
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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139 <param name="title" value="Surface Temperature stripes (1979-2019)" />
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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140 <param name="colormap" value="OrRd" />
2
abdc27e01dca planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit e4c144851549600ffde5bcf875304d5edd98e2b1
climate
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141 <param name="nxsplit" value="50" />
0
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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142 <param name="xname" value="Month" />
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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143 <param name="format_date" value="XYXm" />
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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144 <param name="format_plot" value="XY" />
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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145 <output name="ofilename" ftype="png" file="T2Mstripes_with_axis.png" compare="sim_size" delta="50"/>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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146 </test>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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147 </tests>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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148 <help><![CDATA[
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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149
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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150 **Climate stripes**
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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151 =========================================
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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152
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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153 This tool generate stripes from timeseries and is often used to generate warming stripes.
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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154
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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155
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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156 .. class:: infomark
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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157
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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158 The wrappers aims at creating stripes from a timeseries.
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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159 The input file must be in tabular format and must contain at least one column that is used
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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160 for creating stripes. By default, no title and no axis are plotted. An additional column
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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161 can be specified for date/time and its date and time format must then be specified
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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162 with an additional options.
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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163
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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164 **What it does**
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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165 ----------------
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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166
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
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167 This tools creates an image (png format) corresponding to the visualization of a timeseries as
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
climate
parents:
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168 stripes (see https://www.climate-lab-book.ac.uk/2018/warming-stripes/).
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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169 By default, the colormap is ``RdBu_r`` and no axis nor title are plotted. These settings can be
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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170 changed in *Advanced settings*.
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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171 ]]></help>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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172 <citations>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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173 </citations>
fec3147b0206 "planemo upload for repository https://github.com/NordicESMhub/galaxy-tools/tree/master/tools/climate-stripes commit aa08ea46712c1cfbaac2e6fcd07c93097751cad3"
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174 </tool>