Mercurial > repos > cpt > cpt_gbk_to_5col
annotate test-data/complex_feature_locs.gbk @ 1:1bdd481d5c25 draft
planemo upload commit 94b0cd1fff0826c6db3e7dc0c91c0c5a8be8bb0c
author | cpt |
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date | Mon, 05 Jun 2023 02:42:57 +0000 |
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1 LOCUS contig00077 300 bp DNA linear 15-MAR-2010 |
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2 DEFINITION '[length=22956]' '[numreads=4517 from AU1189;454 Data]'. |
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3 ACCESSION |
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4 VERSION |
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5 KEYWORDS . |
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6 SOURCE AU1189 |
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7 ORGANISM AU1189 |
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8 Unclassified. |
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9 REFERENCE 1 (bases 1 to 22956) |
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10 AUTHORS Duarte,I. |
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11 TITLE contig77 |
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12 JOURNAL Unpublished |
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13 REFERENCE 2 (bases 1 to 22956) |
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14 AUTHORS Duarte,I. |
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15 TITLE Direct Submission |
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16 JOURNAL Submitted (15-MAR-2010) PLPM, Texas A&M University, 2132 TAMU, |
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17 College Station, TX 77840, USA |
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18 FEATURES Location/Qualifiers |
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19 source 1..22956 |
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20 /organism="AU1189" |
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21 /mol_type="genomic DNA" |
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22 CDS complement(join(11159..11327,11327..11652)) |
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23 /note="tapemeasure frameshift chaperone" |
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24 /product="P2 E' tapemeasure frameshift chaperone" |
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25 /translation="MNPIQSDAAAPDLQADAAAIATPAQDDPATHTLDTPLVRGTQTITSITLRKPKSGELRGV |
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26 SLSDLVSLDVVALSKVLPRISSPMLTEADVASIDPADLVQLGGIFAGFFDAEGREIPTGL |
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27 PDRVEDPMADIATVFGWTPPVMDAFSLAELMDWRERARVRAGAQ" |
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28 /gene="gp14" |
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29 CDS complement(join(11409..11600,11600..11900)) |
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30 RBS complement(11905..11910) |
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31 BASE COUNT 3240 a 7606 c 8254 g 3856 t |
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32 ORIGIN |
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33 1 agccgggcgc gccaagcctg atcaggctct cagcggtttc ctcccatcgt cgtgcagtac |
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34 61 cgttgcagct aaattgcagc cggaatcggc gcgggctcgg ccgtcagcgg cgcgacccat |
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35 121 tgcgccagat gcgcggccga cagatgcgcg taccgctgca ccatttccat cgtctcccag |
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36 181 ccgcccagct ccttcagcac ctgcagcggc gtgccgcgtt ggacgtgcca gctcgcccag |
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37 241 gtgtggcgca ggtcgtgcca gcggaaatcg tgcaggccgg cgcgccgcag cgccttggcc |
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38 // |