annotate test-data/input83.fasta @ 5:34e40c872149 draft default tip

Correct requirement for blat version 35x1 .
author crs4
date Mon, 24 Feb 2014 06:27:47 -0500
parents c4ad58c4bc7d
children
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1
c4ad58c4bc7d Add version_command element.
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1 >OR83b
c4ad58c4bc7d Add version_command element.
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2 TTTTTATAATGTGTGCGTGTGTGTGTGTGTGTGTGTCGCATTGATTTCGC
c4ad58c4bc7d Add version_command element.
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3 AATTTATGGGCGATTTGATGGATTGCTTGAATAACTTTATATGCTTATTT
c4ad58c4bc7d Add version_command element.
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4 TTGAGTTTTTATTGTTTTACAACTTGCGGTATTTTATGTAGAGATCCTGT
c4ad58c4bc7d Add version_command element.
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5 GGACGACCTAATGGAAATCATTTGGTTTTGGCTGAAATGCGGCCATAAAG
c4ad58c4bc7d Add version_command element.
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6 GTGTGAATCAAAATAATGTTGCCTATACTTCGGGTATATCATTTCATATG
c4ad58c4bc7d Add version_command element.
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7 GAAAGCGCTTAATAATAATTATATAAATATATAATTTCTAGTTAATGTGA
c4ad58c4bc7d Add version_command element.
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8 CTTTATTAACCCATTAGTGCGTTTTAATCATTTAATTTGGCATCAGAATC
c4ad58c4bc7d Add version_command element.
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9 GATCACAGTCACGAACACAAAAGCGTAATGGTAAAAATAAAGGCTCATTT
c4ad58c4bc7d Add version_command element.
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10 GTTTAAGTTGTAAATTAAATAAAGCAAGTGTCACTTTCCATTTAAATGTT
c4ad58c4bc7d Add version_command element.
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11 GCCTAATAATTAATGACAAAAGGCTGCAGGGCTCACGATGTCCGCGGTTA
c4ad58c4bc7d Add version_command element.
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12 GCTAATTGATCCAAACGCATCCGCGTAATTAAACTTTCAGCCACAAGCCC
c4ad58c4bc7d Add version_command element.
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13 ATAAAATAAATCAAAAAGCGAAGGACCGAAAGGGGCAACATTTAGGGGGG
c4ad58c4bc7d Add version_command element.
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14 GGGGGCTTGTTTCGCATGGCTGAGTTCAGGACGATTAAACGTTAAATCAA
c4ad58c4bc7d Add version_command element.
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15 TATTGTTAAATCCCCGCTCGCATCCCCGCAATCCACACAGGCAAGTGTTC
c4ad58c4bc7d Add version_command element.
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16 ACGTATTAATTGATGTTCGTGAGTGTCCTGCATTTAAATAATCCATGATT
c4ad58c4bc7d Add version_command element.
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17 TGGGACATCTGTGTCTGAGTTCCCATTCATATATGTATGCATATGTGTAT
c4ad58c4bc7d Add version_command element.
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18 ATGAGTGGTGGAAACTAGCTGCAGATATAGCTACAGACACAGATACATTT
c4ad58c4bc7d Add version_command element.
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19 ACATTCCGGCACATAGTTTTAAGTGTGATTCAGTTATTCACAATAGTCGC
c4ad58c4bc7d Add version_command element.
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20 CGCTTTTTGTTCTTGCCACGTTTTAATATTGTCACAACTAGTTTCGAATA
c4ad58c4bc7d Add version_command element.
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21 ACTAAATTGGATGTTTTCGATTAGCATTCAATACACTGCTCAGCAATTTC
c4ad58c4bc7d Add version_command element.
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22 GTTTGCGTTGCAATTTGAGTACTAGATTTTGAATTAGACAATTGTTTTAT
c4ad58c4bc7d Add version_command element.
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23 TAATTGCCTACATGTATATTACCTAACTGATTTCGAAGGCCACTTGTACG
c4ad58c4bc7d Add version_command element.
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24 ACCTTGAGATAGAGTATTAATTATTTAAATTCTACTGTATTATAATTGCA
c4ad58c4bc7d Add version_command element.
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25 AAGAATTGTAAGTATTCATAATATATAATGGCAACCCAATTTAAGACTTC
c4ad58c4bc7d Add version_command element.
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26 TTTTGAAGGCCCCCGCCTACCGAAATTCAGTGCCTATGAGAACTGAGAAC
c4ad58c4bc7d Add version_command element.
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27 GAAAAAAATTGAGCAAGGACCAAATATCCATCAGGCTGAACACACACATT
c4ad58c4bc7d Add version_command element.
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28 TTCATGCAAATAGGCAATGTGTTATTTTTTTGGGTCAGCGATTCACGGAG
c4ad58c4bc7d Add version_command element.
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29 GGATCCCCACCAAATGGGTTGGCTGAGGAATGGCCTATCCCCATATCTCA
c4ad58c4bc7d Add version_command element.
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30 GCGGCACTTGGGGCAGGCCAACAAATACAAGCAGGCATAATAAAATAATC
c4ad58c4bc7d Add version_command element.
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31 GATGCTTTTAAAATTTGCATAAGTTTGGATACCGCAGATGCCGCGCAAGG
c4ad58c4bc7d Add version_command element.
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32 ATGAGCCCATCTCCAGTCCCAGTGCCATTCCGCCAGTGCGCATACGCCGC
c4ad58c4bc7d Add version_command element.
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33 GTGGAGGGCACAGGACTGGGCCATGGCCCATGGCCCAAAAGCGGAGTCCT
c4ad58c4bc7d Add version_command element.
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34 AGACCCGGAGACGACAGCAGTGGTGGACAAGTTCGTGGGCGTTCGATTTA
c4ad58c4bc7d Add version_command element.
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35 ATTGTGGGAATTCTGCGTCTGCCACGCACCCATCACATCGATGGACGTGG
c4ad58c4bc7d Add version_command element.
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36 CTGAAGAGCTGAATTTTTAAGCGCTCCAAGGCGGCCCGATACCCATATTG
c4ad58c4bc7d Add version_command element.
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37 TATATTTTCATTACCATGTGTGGGTCGGAGTGAAAGTCGCGGGCTAGGAT
c4ad58c4bc7d Add version_command element.
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38 TTAATGTGGCCTTGTTGCAGCCGTGGGAACTCGTCCTCAAAGTACACGTC
c4ad58c4bc7d Add version_command element.
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39 CTTATGTACAGCGGAGCAAGTACCTAGCCGACAGAAGGAGCAGGCACTTG
c4ad58c4bc7d Add version_command element.
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40 TCGACAGAGCTTTTTAACCTTCCGGATTTCACATTTCATTACCGTCGACA
c4ad58c4bc7d Add version_command element.
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41 TCGCGGTGCTGGCAGGTCAACTGTGTCCTGGTTCCGGAAAGCCTCATATC
c4ad58c4bc7d Add version_command element.
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42 TCGTATCTTAAAGTATCCCGGTTAAGCCTTAAAGAGTGAAATGATTGCCT
c4ad58c4bc7d Add version_command element.
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43 AGATGATTGCTGCATTACTGGCACTCAATTAACCCAAGTGTACCAGACAA
c4ad58c4bc7d Add version_command element.
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44 CAATTACATTTGTATTTTTAAAGTTCAATAGCAAGGTAATAGCACTGGGT
c4ad58c4bc7d Add version_command element.
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45 CTTTCAATATTACAATATTACCAATTAGAGAACCATATATCGTACACAAT
c4ad58c4bc7d Add version_command element.
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46 TGTTCCACATTCCGAATTTAATAACTCACGATCGATAGCCAAATTAATAT
c4ad58c4bc7d Add version_command element.
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47 TAATTTGAGAGGACATGAGTCCACCTGAATATTCAATATGCATTATACAT
c4ad58c4bc7d Add version_command element.
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48 TATCCCGCTATGAATAAAACATTCCAAATCGATTCATTTCGGGCAGGAAA
c4ad58c4bc7d Add version_command element.
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49 ATTCCTTTTCTACTCGGCAAGCAAACCAAGGACTAATCACAAATACGGAA
c4ad58c4bc7d Add version_command element.
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50 TATTGAACAGATTACGTTCATAATAGCTGATTGTGTTGGCGAAACCTATT
c4ad58c4bc7d Add version_command element.
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51 AATTTTGTCGTGCAATTTCCGCCGCTCAACAGGATGACAACCTCGATGCA
c4ad58c4bc7d Add version_command element.
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52 GCCGAGCAAGTACACGGGCCTGGTCGCCGACCTGATGCCCAACATCCGGG
c4ad58c4bc7d Add version_command element.
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53 CGATGAAGTACTCCGGCCTGTTCATGCACAACTTCACGGGCGGCAGTGCC
c4ad58c4bc7d Add version_command element.
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54 TTCATGAAGAAGGTGTACTCCTCCGTGCACCTGGTGTTCCTCCTCATGCA
c4ad58c4bc7d Add version_command element.
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55 GTTCACCTTCATCCTGGTCAACATGGCCCTGAACGCCGAGGAGGTCAACG
c4ad58c4bc7d Add version_command element.
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56 AGCTGTCGGGCAACACGATCACGACCCTCTTCTTCACCCACTGCATCACG
c4ad58c4bc7d Add version_command element.
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57 AAGTTTATCTACCTGGCTGTTAACCAGAAGAATTTCTACAGGTGAGCCTC
c4ad58c4bc7d Add version_command element.
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58 TGCTCACCGCACCGAGCTTACGAACACTTGGGGAATTTAAAATTTTATGT
c4ad58c4bc7d Add version_command element.
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59 TTTTCCGGCAGAACATTGAATATATGGAACCAGGTGAACACGCATCCCTT
c4ad58c4bc7d Add version_command element.
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60 GTTCGCCGAGTCGGATGCTCGTTACCATTCGATCGCACTGGCGAAGATGA
c4ad58c4bc7d Add version_command element.
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61 GGAAGCTGTTCTTTCTGGTGATGCTGACCACAGTCGCCTCGGCCACCGCC
c4ad58c4bc7d Add version_command element.
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62 TGGACCACGATCACCTTCTTTGGCGACAGCGTAAAAATGGTGGTGGACCA
c4ad58c4bc7d Add version_command element.
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63 TGAGACGAACTCCAGCATCCCGGTGGAGATACCCCGGCTGCCGATTAAGT
c4ad58c4bc7d Add version_command element.
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64 CCTTCTACCCGTGGAACGCCAGCCACGGCATGTTCTACATGATCAGCTTT
c4ad58c4bc7d Add version_command element.
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65 GCCTTTCAGATCTACTACGTGCTCTTCTCGATGATCCACTCCAATCTATG
c4ad58c4bc7d Add version_command element.
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66 CGACGTGATGTTCTGCTCTTGGCTGATATTCGCCTGCGAGCAGCTGCAGC
c4ad58c4bc7d Add version_command element.
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67 ACTTGAAGGGCATCATGAAGCCGCTGATGGAGCTGTCCGCCTCGCTGGAC
c4ad58c4bc7d Add version_command element.
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68 ACCTACAGGCCCAACTCGGCGGCCCTCTTCAGGTCCCTGTCGGCCAACTC
c4ad58c4bc7d Add version_command element.
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69 CAAGTCGGAGCTAATTCATAATGAAGGTGATTTGTTGAGTCTGAACCTAA
c4ad58c4bc7d Add version_command element.
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70 ACTTTTAGGCGGTTATTCAGTGAGCACTTCACTGAATAGGAAAATGCCAT
c4ad58c4bc7d Add version_command element.
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71 GACGAGCTGTTTTTCCATTGCAGAAAAGGATCCCGGCACCGACATGGACA
c4ad58c4bc7d Add version_command element.
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72 TGTCGGGCATCTACAGCTCGAAAGCGGATTGGGGCGCTCAGTTTCGAGCA
c4ad58c4bc7d Add version_command element.
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73 CCCTCGACACTGCAGTCCTTTGGCGGGAACGGGGGCGGAGGCAACGGGTT
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74 GGTGAACGGCGCTAATCCCAACGGGCTGACCAAAAAGCAGGAGATGATGG
c4ad58c4bc7d Add version_command element.
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75 TGCGCAGTGCCATCAAGTACTGGGTCGAGCGGCACAAGCACGTGGTGCGG
c4ad58c4bc7d Add version_command element.
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76 TGAGTTCAAATCCTGGCCAAATTGGACCAGCCATTTCAAGGGGGCTTTGG
c4ad58c4bc7d Add version_command element.
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77 CCAGTGATGATTGGATTTTTGGCGATTTAAATGGCAGAGCAGTCCACTCA
c4ad58c4bc7d Add version_command element.
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78 TATTTCATGGACTTGGATTTTTGCCTTTAACAGAGCACCGAACATAATAA
c4ad58c4bc7d Add version_command element.
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79 ACACACACACTTTCCCCTCAGTTTTGTAAAACTTCAATAGGCGCCATCGG
c4ad58c4bc7d Add version_command element.
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80 AACATGTGTTCTCATTTATTAGGAGCTCAACAGATCCCTGCAGCTTGTTT
c4ad58c4bc7d Add version_command element.
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81 GACTTACTTGATTACTTCCTCAATTGCAATCATTGTTGGGGGCCCTAGAG
c4ad58c4bc7d Add version_command element.
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82 GAATGTCCTTGTTTGTCCTGTCCGACAGTTGGCGTGTGCAGTTGTTGATA
c4ad58c4bc7d Add version_command element.
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83 CCAATATTGACTTGATTCCTGCCTGCAATCCCTCATCCTTTCCCCCGTTG
c4ad58c4bc7d Add version_command element.
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84 CCTTTTCCCCACAGACTGGTGGCTGCCATCGGCGATACTTACGGAGCCGC
c4ad58c4bc7d Add version_command element.
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85 CCTCCTCCTCCACATGCTGACCTCGACCATCAAGCTGACCCTGCTGGCAT
c4ad58c4bc7d Add version_command element.
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86 ACCAGGCCACCAAAATCAACGGAGTGAATGTCTACGCCTTCACAGTCGTC
c4ad58c4bc7d Add version_command element.
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87 GGATACCTAGGATACGCGCTGGCCCAGGTGTTCCACTTTTGCATCTTTGG
c4ad58c4bc7d Add version_command element.
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88 CAATCGTCTGATTGAAGAGGTGAGTTTGTGCAGGGTTGCAAGATAAATTT
c4ad58c4bc7d Add version_command element.
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89 ATAAGTAAATCAGACATCAGTCTCAACTGATTAATAATCGAGAACATCCT
c4ad58c4bc7d Add version_command element.
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90 TATTTGAGTTATAGGGATATTTATAAAAAATTTTGAGACTTCATTAAAAC
c4ad58c4bc7d Add version_command element.
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91 TAAATGAATTGTAAGTTGAGAGTCAACAGATTGGTCCGTTCACTACAAGC
c4ad58c4bc7d Add version_command element.
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92 TAACCAGTGTGTTTTTTCCATGTGGTAGAAATAAAAGGGTGTTTTTGCGT
c4ad58c4bc7d Add version_command element.
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93 ATGAGATAAAATTGAACCAATGTTTTCAAGTTTATAGATTGGGAAACATA
c4ad58c4bc7d Add version_command element.
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94 CATAGTTCTAAACGTTGTTATAGTTATAGTTTGTGTAGTTAGTTATCTAG
c4ad58c4bc7d Add version_command element.
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95 AGCATCCTTAATACGACTTTCATTTCGCAGAGTTCATCCGTCATGGAGGC
c4ad58c4bc7d Add version_command element.
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96 CGCCTACTCGTGCCACTGGTACGATGGCTCCGAGGAGGCCAAGACCTTCG
c4ad58c4bc7d Add version_command element.
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97 TCCAGATCGTGTGCCAGCAGTGCCAGAAGGCGATGAGCATATCGGGAGCG
c4ad58c4bc7d Add version_command element.
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98 AAATTCTTCACCGTCTCCCTGGATTTGTTTGCTTCGGTTTGTTGCATTTG
c4ad58c4bc7d Add version_command element.
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99 ATTTATTGATCTATTGATGGAGTTAAAACTGAATCGGATATTCCCGATTC
c4ad58c4bc7d Add version_command element.
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100 GCAGGTTCTGGGTGCCGTCGTCACCTACTTTATGGTGCTGGTGCAGCTCA
c4ad58c4bc7d Add version_command element.
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101 AGTAAGTTGCTGCGAAGCTGATGGATTTTTGTACCAGAAAAGCGAATGCC
c4ad58c4bc7d Add version_command element.
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102 AAGAAGCCACCTACCGCCCCTTGCCCCCTCCGCACTGTGCAACCAGCAAT
c4ad58c4bc7d Add version_command element.
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103 ATCACAGAGCAATTATAACGCAAATTATATATTTTATACCTGCGACGAGC
c4ad58c4bc7d Add version_command element.
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104 GAGCCTCGTGGGGCATAATGGAGACATTCTGGGGCACATAGAAGCCTGCA
c4ad58c4bc7d Add version_command element.
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105 AATACTTATCGATTTTGTACACGCGTAGAGCTTTTAATGTAAACCCAAGA
c4ad58c4bc7d Add version_command element.
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106 TGCAAACTAAATAAATGTGTAGTG