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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README.md Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,42 @@ +# blast_reporting +NCBI BLAST+ searches can output in a range of formats, but in the past only the XML format included fields like sequence description. This tool converts the NCBI BLAST XML report into 12, 24, 26 or custom column tabular and HTML reports. It is used as a command-line tool or via a Galaxy bioinformatics platform tool. + +The tool allows almost complete control over which fields are displayed and filtered, how columns are named, and how the HTML report on each query is sectioned. Search result records can be filtered out based on values in numeric or textual fields. Matches (by accession id) to a selection of reference databases can be shown, and this can include a description of the matched sequence. + +Currently this tool only takes as input the "Output format: BLAST XML" option of the NCBI Blast+ search tool, triggered by (for example) + +blastn -outfmt 5 -query "...." + +or via Galaxy by selecting the NCBI Blast+ search tool's option towards bottom of form ... + +## Documentation +A fairly comprehensive user guide is available in the doc/ folder. + +## Installation +The tool can be installed from https://toolshed.g2.bx.psu.edu/ . It draws upon the XML reports generated by the NCBI Blast+ tools. + +The setup of Reference Bins and the Selectable HTML Report are optional as described below. + +### Using ''Reference Bins'' + - A reference bin file is simply a text file having line records each containing an accession id and a description. The accession id is cross-referenced with the accession id returned with each search hit. However we have to tell the Blast reporting tool where these tables are. Their names and paths are listed in the fasta_reference_dbs.loc.sample, which ends up in the Galaxy install's tool-data/fasta_reference_dbs.loc file. +Example: + +``` +AADS00000000.1 Phanerochaete chrysosporium RP-78 +AAEW02000014.2 Desulfuromonas acetoxidans DSM 684 +AAEY01000007.0 Cryptococcus neoformans var. neoformans B-3501A +AAFI01000166 Dictyostelium discoideum AX4 +AAFW02000169.3 Saccharomyces cerevisiae YJM789 +``` + +Both the search result hit and the reference file accession ids are stripped of any fractional component before being compared. + +### Using the ''Selectable HTML Report'': + - This is EXPERIMENTAL because it currently requires the "select subsets" galaxy tool with a bit of extra setup that might have to be redone as Galaxy evolves: + - In Galaxy install and run the "Select subsets" tool from https://toolshed.g2.bx.psu.edu/. + - Use your browser's "View frame source" option while mouse is over the "Select subsets" form. + - Scroll down to the <input type="hidden" name="tool_state" value="..."> and copy the numeric value string into a new text file. + - save the text file with the name "html_selectable_report_tool_state" to the tool's templates/ subfolder. It should be alongside the html_selectable_report.py script which reads it. + +## Development notes + - A few changes are in the works: A galaxy form tool fix sheduled in the next month will enable setup of reference databases to be much easier. One will only have to load each reference bin file into a Galaxy data library you can set up.
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/blast_reporting.py Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,627 @@ +#!/usr/bin/python +"""Convert a BLAST XML file to 12 column tabular output + +This tool can be used both via command line and via a local Galaxy install. +Galaxy uses .loc files as indicated by the tool_data_table_conf.xml.sample. +The command line version uses .tab versions of the above files: + blast_reporting_fields.loc + fasta_reference_dbs.loc +So for command-line use, ensure the .tab files are updated to their .loc counterparts. + +Takes three command line options, input BLAST XML filename, output tabular +BLAST filename, output format (std for standard 12 columns, or ext for the +extended 24 columns offered in the BLAST+ wrappers). + +The 12 columns output are 'qseqid sseqid pident length mismatch gapopen qstart +qend sstart send evalue bitscore' or 'std' at the BLAST+ command line, which +mean: + +====== ========= ============================================ +Column NCBI name Description +------ --------- -------------------------------------------- + 1 qseqid Query Seq-id (ID of your sequence) + 2 sseqid Subject Seq-id (ID of the database hit) + 3 pident Percentage of identical matches + 4 length Alignment length + 5 mismatch Number of mismatches + 6 gapopen Number of gap openings + 7 qstart Start of alignment in query + 8 qend End of alignment in query + 9 sstart Start of alignment in subject (database hit) + 10 send End of alignment in subject (database hit) + 11 evalue Expectation value (E-value) + 12 bitscore Bit score +====== ========= ============================================ + +The additional columns offered in the Galaxy BLAST+ wrappers are: + +====== ============= =========================================== +Column NCBI name Description +------ ------------- ------------------------------------------- + 13 sallseqid All subject Seq-id(s), separated by a ';' + 14 score Raw score + 15 nident Number of identical matches + 16 positive Number of positive-scoring matches + 17 gaps Total number of gaps + 18 ppos Percentage of positive-scoring matches + 19 qframe Query frame + 20 sframe Subject frame + 21 qseq Aligned part of query sequence + 22 sseq Aligned part of subject sequence + 23 qlen Query sequence length + 24 slen Subject sequence length +====== ============= =========================================== + +Very slight modifications were made to the "BLAST XML to tabular" tool that +ships with Galaxy to output two more column columns: + +====== ============= =========================================== +Column NCBI name Description +------ ------------- ------------------------------------------- + 25 pcov Percentage coverage + 26 sallseqdescr All subject Seq-descr(s), separated by a ',' +====== ============= =========================================== + +Most of these fields are given explicitly in the XML file, others some like +the percentage identity and the number of gap openings must be calculated. + +In addition an option exists to select particular columns for the output +report. Reference bin columns will be added if they have been included in +search. + +A command line version can be used. Type blast_reporting.py -h for help. + +Be aware that the sequence in the extended tabular output or XML direct from +BLAST+ may or may not use XXXX masking on regions of low complexity. This +can throw the off the calculation of percentage identity and gap openings. +[In fact, both BLAST 2.2.24+ and 2.2.25+ have a subtle bug in this regard, +with these numbers changing depending on whether or not the low complexity +filter is used.] + +This script attempts to produce identical output to what BLAST+ would have done. +However, check this with "diff -b ..." since BLAST+ sometimes includes an extra +space character (probably a bug). + +python blast_reporting.py in_file out_tabular_file out_html_file out_format +""" +import sys +import re +import os.path +import common +import reference_bins +#import templates.html_report + +if __name__ == '__main__' and __package__ is None: + from os import path + sys.path.append(path.dirname(path.dirname(path.abspath(__file__)))) + +if sys.version_info[:2] >= ( 2, 5 ): + import xml.etree.cElementTree as ElementTree +else: + from galaxy import eggs + import pkg_resources; pkg_resources.require( "elementtree" ) + from elementtree import ElementTree + +class GenericRecord(object): pass + +class XMLRecordScan(object): + """ + XML Input file usually looks like: + + <BlastOutput> + <BlastOutput_program>blastn</BlastOutput_program> + <BlastOutput_param> + <Parameters> + <Parameters_expect>0.001</Parameters_expect> + <Parameters_sc-match>1</Parameters_sc-match> + <Parameters_sc-mismatch>-2</Parameters_sc-mismatch> + <Parameters_gap-open>0</Parameters_gap-open> + <Parameters_gap-extend>0</Parameters_gap-extend> + <Parameters_filter>L;m;</Parameters_filter> + </Parameters> + </BlastOutput_param> + <Iteration> + <Iteration_iter-num>1</Iteration_iter-num> + <Iteration_query-ID>Query_1</Iteration_query-ID> + <Iteration_query-def>ENA|EF604038|EF604038.1 Uncultured bacterium clone 16saw43-2g09.q1k 16S ribosomal RNA gene, partial sequence</Iteration_query-def> + <Iteration_query-len>1364</Iteration_query-len> + <Iteration_hits> + + <Hit> + <Hit_num>1</Hit_num> + <Hit_id>gi|444439670|ref|NR_074985.1|</Hit_id> + <Hit_hsps>... + <Hsp>... + """ + def __init__(self, options, output_format): + """ Creates a record object that holds field data for each <hit> iteration in Blastn XML data + + .record object: holds values read in from <XML> <hit> record mainly. + .tags dictionary: XML tags and the record.[x] fields/attributes that should be set to tag values. + .column_format dictionary: Name to field count dictionary used for selecting # of output fields + .fieldSpec dictionary: Specification of each possible field's type (for validation), full name, and suitability for sorting, filtering, etc. + .custom_columns array takes list of custom columns to output. (If sorting by a column it must be in this list) + .reference_bins dictionary + + """ + self.record = GenericRecord() # Set up so we can use object attributes. + + #This is a list of all incomming blast generated XML fields that we want to capture + # self.record gets all underscored variables values as well as new derived ones in process() below + self.tags = { + "BlastOutput_program": '_blast_program', + "Iteration_query-ID": '_qseqid', + "Iteration_query-def": '_qdef', + "Iteration_query-len": '_qlen', #extended+ calc + + "Hit_id": '_hit_id', + "Hit_def": '_hit_def', #extended+ calc + "Hit_accession": '_hit_acc', + "Hit_len": '_hit_len', + + "Hsp_bit-score": '_bitscore', #basic + "Hsp_score": '_score', #extended + "Hsp_evalue": '_evalue', #basic + "Hsp_query-from": '_qstart', #basic, extended+ calc + "Hsp_query-to": '_qend', #basic, extended+ calc + "Hsp_hit-from": '_sstart', #basic + "Hsp_hit-to": '_send', #basic + "Hsp_query-frame": '_qframe', #extended only + "Hsp_hit-frame": '_sframe', #extended only + "Hsp_identity": '_nident', #extended + "Hsp_positive": '_positive', #extended + "Hsp_gaps": '_gaps', #extended + "Hsp_align-len": '_length', #basic + "Hsp_qseq": '_qseq', #extended + "Hsp_hseq": '_sseq', #extended + "Hsp_midline": '_mseq' #basic + } + + self.column_format = { + 'std':12, + 'ext':24, + 'std+seqs':12, + 'ext+':26, + 'custom':1 + } + + if not output_format in self.column_format: + common.stop_err("Format argument should be std (12 column) or ext (extended 24 columns) or ext+ (extended 26+ columns) or custom (you choose fields). Format argument x22 has been replaced with ext (extended 24 columns)") + + # Array of columns destined for tab-delimited output - This defines default ORDER of fields too. + # Raw data fields that never get output: _bitscore, _evalue, _qframe, _sframe, + # and this that has no m_frame equivalent: _mseq + self.columns_in = 'qseqid sseqid pident _length mismatch gapopen _qstart _qend _sstart _send evalue bitscore \ + sallseqid _score _nident _positive _gaps ppos qframe sframe _qseq _sseq qlen slen \ + pcov sallseqdescr accessionid sseqdescr _mseq'.split() + + fieldSpecFile = os.path.join(os.path.dirname(__file__), 'blast_reporting_fields.tab') + self.field_spec = common.FieldSpec(fieldSpecFile, self.columns_in) + + # Include first N fields from .columns according to format. + # In all cases qseqid is included. + # Default everything to "column". + columns_out = self.columns_in[0:self.column_format[output_format]] + + # This column list is designed for creating phylogeny reports. + if output_format == 'std+seqs': columns_out.extend(['_qseq','_sseq']) + + self.columns = self.field_spec.initColumns(columns_out, options.custom_fields) + + # We're making these columns hidden for this particular HTML report format + # UNLESS they are mentioned in options.custom_fields + if output_format == 'std+seqs': + for (ptr, target) in enumerate(self.columns): + if target['field'] in ['_qseq','_sseq'] and options.custom_fields and not target['field'] in options.custom_fields : + target['group'] = 'hidden' + + # ADD SELECTED BINS TO COLUMN LIST; + self.binManager = reference_bins.ReferenceBins() + self.binManager.build_bins(options.reference_bins, self.columns) + + def setRecordAttr(self, tag, text): + #self.record is a class object (not a dictionary) so using setattr() + setattr(self.record, self.tags[tag], text) + + # Called after set() has processed a bunch of <hit> ...</hit> tags + def processRecord(self) : + + bline = self.record + + # NCBI notes: Expecting either this, + # <Hit_id>gi|3024260|sp|P56514.1|OPSD_BUFBU</Hit_id> + # <Hit_def>RecName: Full=Rhodopsin</Hit_def> + # <Hit_accession>P56514</Hit_accession> + #or, + # <Hit_id>Subject_1</Hit_id> + # <Hit_def>gi|57163783|ref|NP_001009242.1| rhodopsin [Felis catus]</Hit_def> + # <Hit_accession>Subject_1</Hit_accession> + #or, + # <Hit_id>Subject_1</Hit_id> + # <Hit_def>gi|57163783|ref|NP_001009242.1| rhodopsin [Felis catus]</Hit_def> + # <Hit_accession>Subject_1</Hit_accession> + #apparently depending on the parse_deflines switch + + sseqid = self.record._hit_id.split(None,1)[0] + + # If Hit_id == Hit_accession AND it is a default "Subject_1" ... + # OR Hit_accession IN Hit_id and BL_ORD_ID|XXXX contains hit_accession + if common.re_default_subject_id.match(sseqid) and sseqid.find(bline._hit_acc): + # and sseqid == bline._hit_acc: + #Place holder ID, take the first word of the subject definition + hit_def = bline._hit_def + sseqid = hit_def.split(None,1)[0] + else: + hit_def = sseqid + " " + bline._hit_def + + self.record.sseqid = sseqid + + if common.re_default_ncbi_id.match(sseqid): + self.record.accessionid = sseqid.split('|')[3] + elif common.re_default_ref_id.match(sseqid): + self.record.accessionid = sseqid.split('|')[1] + else: + # Have to use the whole string. + self.record.accessionid = sseqid + + + # NCBI notes: Expecting either this, from BLAST 2.2.25+ using FASTA vs FASTA + # <Iteration_query-ID>sp|Q9BS26|ERP44_HUMAN</Iteration_query-ID> + # <Iteration_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def> + # <Iteration_query-len>406</Iteration_query-len> + # <Iteration_hits></Iteration_hits> + # + #Or, from BLAST 2.2.24+ run online + # <Iteration_query-ID>Query_1</Iteration_query-ID> + # <Iteration_query-def>Sample</Iteration_query-def> + # <Iteration_query-len>516</Iteration_query-len> + # <Iteration_hits>... + + # Note BioPython's approach http://biopython.org/DIST/docs/api/Bio.SearchIO.BlastIO.blast_xml-pysrc.html + # ... if hit_id.startswith('gnl|BL_ORD_ID|'): ... + + if common.re_default_query_id.match(bline._qseqid): + #Place holder ID, take the first word of the query definition + qseqid = bline._qdef.split(None,1)[0] + else: + qseqid = bline._qseqid + + self.record.qseqid = qseqid + + self.record.evalue = "0.0" if bline._evalue == "0" else "%0.0e" % float(bline._evalue) + + # NCBI notes: + # if bline._bitscore < 100: + # #Seems to show one decimal place for lower scores + # bitscore = "%0.1f" % bline._bitscore + # else: + # #Note BLAST does not round to nearest int, it truncates + # bitscore = "%i" % bline._bitscore + bitscore = float(bline._bitscore) + self.record.bitscore = "%0.1f" % bitscore if bitscore < 100 else "%i" % bitscore + + self.record.pident = "%0.2f" % (100*float(bline._nident)/float(bline._length)) + + self.record.gapopen = str(len(bline._qseq.replace('-', ' ').split())-1 + \ + len(bline._sseq.replace('-', ' ').split())-1) + + mismatch = bline._mseq.count(' ') + bline._mseq.count('+') \ + - bline._qseq.count('-') - bline._sseq.count('-') + #assert len(bline._qseq) == len(bline._sseq) == len(bline._mseq) == int(bline._length) + self.record.mismatch = str(mismatch) + + # Extended fields + #sallseqid gets ";" delimited list of first words in each hit_def "x>y>z" expression. + #Nov 7 2013 fix: https://github.com/peterjc/galaxy_blast/blob/master/tools/ncbi_blast_plus/blastxml_to_tabular.py + hit_def_array = hit_def.split(" >") #Note: elem.text below converts escaped ">" back to ">" + try: + self.record.sallseqid = ";".join(name.split(None,1)[0] for name in hit_def_array) + except IndexError as e: + common.stop_err("Problem splitting multiple hit ids?\n%r\n--> %s" % (hit_def, e)) + + # Calculate accession ids, and check bin(s) for them, update record accordingly. + self.binManager.setStatus(self.record) + + self.record.ppos = "%0.2f" % (100*float(bline._positive)/float(bline._length)) + qframe = bline._qframe + sframe = bline._sframe + if bline._blast_program == "blastp": + #Probably a bug in BLASTP that they use 0 or 1 depending on format + if qframe == "0": qframe = "1" + if sframe == "0": sframe = "1" + + self.record.qframe = qframe + self.record.sframe = sframe + self.record.slen = str(int(bline._hit_len)) + self.record.qlen = str(int(bline._qlen)) + + #extended+ + self.record.pcov = "%0.2f" % (float(int(bline._qend) - int(bline._qstart) + 1)/int(bline._qlen) * 100) + sallseqdescr = [] + try: + for name in hit_def_array: + id_desc = name.split(None,1) + if len(id_desc) == 1: sallseqdescr.append('missing description - database issue') + else: sallseqdescr.append(id_desc[1]) + except IndexError as e: + common.stop_err("Problem splitting multiple hits?\n%r\n--> %s" % (hit_def, e)) + # Example sallseqdescr is "Mus musculus ribosomal protein S8 (Rps8), mRNA ;Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410041L12 product:ribosomal protein S8, full insert sequence" + + self.record.sallseqdescr = ";".join(sallseqdescr) + self.record.sseqdescr = sallseqdescr[0] + + return True # One may return false anywhere above to filter out current <Hsp> record. + + + # Tab-delimited order is important, so we can't just cycle through (unordered) self.record attributes. + # + # @uses .record object with field attributes + # @uses .prelim_columns (used before final column selection) + def outputTabDelimited(self): + values = [] + + for col in self.columns: + values.append(getattr(self.record, col['field'])) + + return '\t'.join(values) + '\n' + + + +class ReportEngine(object): + + def __init__(self): pass + + def __main__(self): + + + ## *************************** Parse Command Line ***************************** + parser = common.MyParser( + description = 'Generates tab-delimited table report based on BLAST XML results.', + usage = 'python blast_reporting.py [blastxml_input_file] [out_format] [tabular_output_file] [option: html_output_file] [option: selection_output_file:id_1:id_2:id_3] [options]', + epilog="""Details: + + This tool can be used both via command line and via a local Galaxy install. + Galaxy uses .loc files (blast_reporting_fields.loc, fasta_reference_dbs.loc) + as indicated by the tool's tool_data_table_conf.xml.sample. The command line script + uses .tab versions (located in the script's folder) which need to reflect any changes + made in the .loc versions. + + Note: the selection file option is used mainly by the galaxy blast reporting tool. + + [out_format] is one of: + "std" : standard 12 column + "std+seqs" : standard 12 column plus search and matched sequences + "ext" : extended 24 column + "ext+": 26+ column + "custom": Use only given field selections. + + Use -i to see possible field (column) selections as defined by blast_reporting_fields.tab. + + REFERENCE_BINS: Selected bins have their columns shown in output table for clarity, even when custom fields are selected, unless selecting the bin "exclude" option. + + FILTERS: + Format: ([field_name]:[comparator] [value];)* + e.g. "pident: gt 97; sallseqdescr: excludes bovine|clone|environmental|swine|uncultivated|uncultured|unidentified" + [comparator] = + == numeric equal + != numeric not equal + gt numeric greater than + gte numeric greater than or equal to + lt numeric less than + lte numeric less than or equal to + includes (search text fields for included words/phrases) + excludes (same as above but exclude result if text found) + + Textual comparisons may have a value consisting of phrases to search for separated by "|" (disjunction). + + + """) + + parser.set_defaults(row_limit=0) + # Don't use "-h" , it is reserved for --help! + + parser.add_option('-b', '--bins', type='string', dest='reference_bins', + help='Provide a comma-delimited list of reference databases to check, along with their sort order, and a flag to exclude them if desired, e.g. "16Sncbi desc,euzby desc,16Srdp exclude". See -i option for a list of available databases.') + + parser.add_option('-c', '--columns', type='string', dest='custom_fields', + help='To modify sorting and formatting, specify a comma-delimited list of field specifications of the form: "[field_name]:[column|table|section]:[asc|desc|none]:[new label text];..." .') + + parser.add_option('-f', '--filter', type='string', dest='filters', + help='Provide a semicolon-delimited list of fields and their criteria to filter by.') + + parser.add_option('-i', '--info', dest='info', default=False, action='store_true', + help='Provides list of columns and their descriptions, for use in filter, sort and custom column lists. Shows a list of available sequence type reference bins as well') + + parser.add_option('-l', '--label', type='string', dest='column_labels', + help='Include field labels in first row of tab-delimited result table as short names or data field names (or none)') + + parser.add_option('-n', '--number', type='int', dest='row_limit', + help='Provide a limit to the number of rows of returned data. The default 0=unlimited.') + + #TESTING + parser.add_option('-B', '--refbins', type='string', dest='refbins', + help='Testing library_data form input.') + + parser.add_option('-r', '--redundant', dest='drop_redundant_hits', default=False, action='store_true', + help='Return only first match to a gene bank id result.') + + parser.add_option('-t', '--tests', dest='test_ids', help='Enter "all" or comma-separated id(s) of tests to run.') + + options, args = parser.parse_args() + + if options.test_ids: + + # Future: read this spec from test-data folder itself? + tests = { + '1a': {'input':'blast_reporting_1.blastxml std','outputs':'blast_reporting_1a.tabular','options':''}, + '1a1':{'input':'blast_reporting_1.blastxml std','outputs':'blast_reporting_1a1.tabular blast_reporting_1a1.html','options':'-r'}, + '1b': {'input':'blast_reporting_1.blastxml std','outputs':'blast_reporting_1b.tabular','options':'-r -f "pident:gte 97"'}, + '1c': {'input':'blast_reporting_1.blastxml std','outputs':'blast_reporting_1c.tabular','options':'-r -f "pident:gte 97" -c "pident:column:asc" -l label'}, + '1d': { + 'input':'blast_reporting_1.blastxml ext+', + 'outputs':'blast_reporting_1d.tabular blast_reporting_1d.html blast_reporting_1d1.tabular', + 'options':'-r -f "pident:gte 99" -l label -n 5' + } + } + common.testSuite(options.test_ids, tests, '/tmp/') + + import time + time_start = time.time() + + # "info" command provides a dump of all the fields that can be displayed from the Blast search. + if options.info: + # CAN WE LOCATE THIS FILE AS GALAXY SEES IT?????? + print 'FIELDS:\n' + field_spec_path = os.path.join(os.path.dirname(__file__), 'blast_reporting_fields.tab') + fields = common.FieldSpec(field_spec_path) + for field in sorted(fields.dict.keys()): + print field + "\t" + fields.getAttribute(field,'type') + "\t" + fields.getAttribute(field,'name') + + print '\nREFERENCE BINS:\n' + field_spec_path = os.path.join(os.path.dirname(__file__), 'fasta_reference_dbs.tab') + fields = common.FieldSpec(field_spec_path) + for field in sorted(fields.dict.keys()): + print field + "\t" + fields.getAttribute(field, 'path') + field + '/accession_ids.tab' + '\t' + fields.getAttribute(field, 'name') + + sys.exit(1) + + try: + in_file, output_format, out_tabular_file = args[0:3] + + except: + common.stop_err("Expecting 3 arguments: input BLAST XML file, out format (std | std+seqs | ext | ext+ | custom), and output tabular file") + + try: + # Get an iterable, see http://effbot.org/zone/element-iterparse.htm + context = ElementTree.iterparse(in_file, events=("start","end")) # By default only does end events. + context = iter(context) + event, root = context.next() # Creates reference to root element on 'start' event, for housecleaning below. + except: + common.stop_err("Invalid data format. !!") + + tagGroup = XMLRecordScan(options, output_format) + fieldFilter = common.FieldFilter(tagGroup, options) # .filter list field names are changed above. + + if options.reference_bins: print 'Database bins: %s' % str([bin.name for (ptr, bin) in enumerate(tagGroup.binManager.reference_bins) ]).translate(None, "[']") + if options.custom_fields: print 'Customized Fields: %s' % options.custom_fields + if options.filters: print 'Filters: ' + options.filters + if options.drop_redundant_hits: print 'Throwing out redundant hits...' + + # ************************ FILE OUTPUT ***************************** + # IT IS CRITICAL THAT EVERY <HIT>/<HSP> RETURN A COMPLETE XML SET OF TAGS OTHERWISE PREV. RECORD VALUES PERSIST + # NOTE: GALAXY 2012 has bug in html data display - it will show duplicate records OCCASIONALLY (at least on some browsers). You have to download data file to verify there are no duplicates + + row_count = 0 + row_count_filtered = 0 + outfile = open(out_tabular_file, 'w') + query_stats = [] + + for event, elem in context: + + # Alternative is to wipe Hit/Hsp fields on event == "start". + tag = elem.tag + if event == 'end': + if tag in tagGroup.tags : #Content of these tags fills a tabular line with column info. + tagGroup.setRecordAttr(tag, elem.text) + if tag == 'Iteration_query-def': + row_count = 0 + row_count_filtered = 0 + query_stats.append({'id':elem.text, 'rows' : 0, 'filtered_rows' : 0}) + + # Process each </hsp> record + elif tag == 'Hsp': + row_count += 1 + query_stats[-1]['rows'] = row_count # real rows, not clipped + if options.row_limit == 0 or row_count_filtered < options.row_limit: + + # Transform <Hsp> record & add field info. + if tagGroup.processRecord(): + + #if tagGroup.processFilters(): + if fieldFilter.process(tagGroup.record): + row_count_filtered +=1 + query_stats[-1]['filtered_rows'] = row_count_filtered + outfile.write(tagGroup.outputTabDelimited()) + + root.clear() # Clears references from root to (now unused) children to keep iterated datastructure small ??? + + elem.clear() # I think root.clear() cover this case. + + root.clear() + outfile.close() + + + # Use fast Linux "sort" after filtering & file write + common.fileSort(out_tabular_file, tagGroup.columns) + + """ + The "Selection file" option is meant for galaxy UI use in conjunction + with the "Select Subsets on data" tool. If a selection_file is called + for, then we need to extract its id as well. For that we have to test + for somewhat odd expression from xml-generated command line, the + [$selection_file:$selection_file.hid:$selection_file.dataset_id:$selection_file.id] + Selection list doesn't necessarily need the HTML selectable report template, + but that template was designed to feed the galaxy "Select subsets" tool with its data. + """ + + if len(args) > 4 and args[4] != 'None:None:None:None': + selection_file_data = args[4] + + #print ('selection file data:' + selection_file_data) + sel_file_fields = selection_file_data.split(':') + selection_file = sel_file_fields[0] + # From galaxy, incoming format is $selection_file:$selection_file.hid:$selection_file.dataset_id:$selection_file.id + # From command line, user won't have specified any of this, so ignore. + if len(sel_file_fields) > 3: + options.dataset_selection_id = sel_file_fields[3] + + else: + options.dataset_selection_id = 0 + + common.fileSelections(out_tabular_file, selection_file, tagGroup, options) + + + """ + We must have a template in order to write anything to above html output file. + All report templates need to be listed in the module's tabular data "blast_reporting_templates" folder. + # There are two possible HTML Report template locations: + # 1) The stock reports included in the module in the "templates/" subfolder, e.g. html_report.py + # 2) User customized templates. To set this up: + - add a custom template folder in a location of your choice. + - Copy this module's templates folder into it. + - The new folder must be in python's sys.path, which is achieved by adding a .pth file to python's site-packages folder.. E.g. set up /usr/lib/python2.6/site-packages/galaxy-custom-modules.pth to contain "/usr/local/galaxy/shared/python2.6_galaxy_custom_modules" + , and place 'templates_custom/html_report.py' in there. + """ + if len(args) > 3: + out_html_file = args[3] #Galaxy-generated + # args[5] = html_template, default from galaxy xml is 'templates.html_report', but testing can receive 'None' value + if len(args) > 5 and len(args[5].strip()) > 0 and not args[5].strip() == 'None': + + html_template = args[5] #User-selected + if not html_template.translate(None, "._-" ).isalnum(): + common.stop_err("The HTML Report template name is not correct. It should be a python class path like templates.html_report)! : " + html_template) + + else: + html_template = 'templates.html_report' + + try: + # See http://stackoverflow.com/questions/769534/dynamic-loading-of-python-modules + HTMLReportModule = __import__(html_template, fromlist=['does not in fact matter what goes here!']) + # Now create final tabular, html (or future: xml) data + htmlManager = HTMLReportModule.HTMLReport(tagGroup, options, query_stats) + # htmlManager might not be initialized if the caller couldn't provide all the data the particular template needed. + htmlManager.render(out_tabular_file, out_html_file) + + except ImportError: + common.stop_err("Unable to locate HTML Report template! : " + html_template) + + + common.fileTabular(out_tabular_file, tagGroup, options) + + print('Execution time (seconds): ' + str(int(time.time()-time_start))) + + +if __name__ == '__main__': + # Command line access + reportEngine = ReportEngine() + reportEngine.__main__()
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/blast_reporting.xml Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,309 @@ +<tool id="blast_reporting" name="BLAST Reporting" version="1.0.5"> + <description>BLAST search results reporting tool</description> + <command interpreter="python"><![CDATA[ + blast_reporting.py + $blastxml_file + $out_format + $tabular_file + $html_file + $selection_file:$selection_file.hid:$selection_file.dataset_id:$selection_file.id + $html_template + -f " + #for $my_repeat in $filter_num + $my_repeat.filter_column: + #for $my_repeat2 in $my_repeat.constraint + $my_repeat2.filter_comparison $my_repeat2.filter_value, + #end for + ; + #end for + #for $my_repeat in $filter_text + $my_repeat.filter_column2: + #for $my_repeat2 in $my_repeat.constraint2 + $my_repeat2.filter_comparison2 $my_repeat2.filter_value2.replace(',','|'), + #end for + ; + #end for + " + #if len($bins) + -b " + #for $my_repeat in $bins + $my_repeat.bin_column:$my_repeat.group:$my_repeat.filter:$my_repeat.description; + #end for + " + #end if + #if $drop_redundant_hits + -r + #end if + #if $column_labels + -l "${column_labels}" + #end if + #if len($fields) + -c " + #for $my_repeat in $fields + $my_repeat.field:$my_repeat.group:$my_repeat.sort:$my_repeat.label; + #end for + " + #end if + #if not str($row_limit) == "None" + -n "${row_limit}" + #end if + ###if $library_datasets + ## -B " + ## #for $i, $dataset in enumerate($library_datasets) + ## #$dataset.get_file_name() + ## $dataset.id + ## #end for + ## " + ###end if + ]]></command> + +<!-- target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/seq/${path}</target --> + + <inputs> + <param name="blastxml_file" type="data" format="blastxml" label="BLAST results as XML"/> + + <repeat name="filter_num" title="Numeric Filter" min="0" max="4"> + <!-- TRIED conditional here, but it does not allow for <repeat> children. --> + + <param name="filter_column" type="select" label="Col"> + <options from_data_table="blast_reporting_fields"> + <filter type="static_value" value="numeric" column="type" /> + <filter type="sort_by" column="name"/> + </options> + </param> + + <repeat name="constraint" title="Constraint" min="1" max="3"> + <param name="filter_comparison" type="select" label="Comparison"> + <option value="gte">>= </option> + <option value="gt">></option> + <option value="lt">< </option> + <option value="lte"><= </option> + <option value="==">equal to </option> + <option value="!=">not equal to </option> + </param> + + <param name="filter_value" type="text" value="" label="Value"> + <validator type="regex" message="Please input a number">([0-9]+|[0-9]*\.[0-9]+)</validator> + </param> + + </repeat> + </repeat> + + <repeat name="filter_text" title="Text Filter" min="0" max="3"> + <param name="filter_column2" type="select" label="Column"> + <options from_data_table="blast_reporting_fields"> + <filter type="sort_by" column="name"/> + <filter type="static_value" value="text" column="type" /> + </options> + </param> + <repeat name="constraint2" title="Constraint" min="1" max="6"> + <param name="filter_comparison2" type="select" label="Comparison"> + <option value="includes">has text</option> + <option value="excludes">excludes text</option> + </param> + <param name="filter_value2" type="text" size="25" label="Phrase(s), comma separated" value=""/> + </repeat> + </repeat> + + <param name="drop_redundant_hits" type="boolean" checked="true" label="Throw out redundant hits" help="Keep only the best hit when query matches multiple locales in a subject sequence." /> + + <param name="row_limit" type="integer" label="Row limit (per query)" help="Limit each query's results to this many rows. 0=unlimited." value="0" /> + + <param name="out_format" type="select" label="Basic Report Field Output" help="Use the field selectors below to add or customize fields that end up in the output HTML or tabular report. By default results are presented by query, with table data sorted by score, descending. Enter a preferred label in the text field to override the default field labeling."> + <option value="std" selected="True">Standard 12 columns</option> + <option value="std+seqs">Standard 12 columns + sequences</option> + <option value="ext">Extended 24 columns</option> + <option value="ext+">Extended 26 columns</option> + <option value="custom">Only field selections below</option> + </param> + + <repeat name="fields" title="Field" min="0"> + <!-- acc, descr, score, p_cov, p_ident, --> + <param name="field" type="select" label="Include"> + <options from_data_table="blast_reporting_fields"> + <filter type="sort_by" column="name"/> + <filter type="static_value" value="1" column="choose" /> + </options> + </param> + <param name="group" type="select" label="Group"> + <option value="column" selected="true">A column</option> + <option value="hidden">A hidden column</option> + <option value="table">A table section</option> + <option value="section">A report section</option> + </param> + <param name="sort" type="select" label="Sort"> + <option value="" selected="true">no sorting</option> + <option value="desc">descend</option> + <option value="asc">ascend</option> + </param> + + <param name="label" type="text" label="Customize label for this column or section" size="15" value=""/> + </repeat> + + <!-- Disabled until Galaxy bug fixed for this. + <param name="library_datasets" type="library_data" label="Reference Bin file" help="Select one reference bin at a time from the popup window's Reference Bin library."/> + --> + + <repeat name="bins" title="Reference Bin" min="0" max="5"> + + <param name="bin_column" type="select" label="Sort by database bin match"> + <options from_data_table="fasta_reference_dbs"></options> + </param> + <param name="group" type="select" label="Grouping"> + <option value="column" selected="true">A column</option> + <option value="hidden">A hidden column</option> + <option value="table">A table section</option> + </param> + <param name="filter" type="select" label="Filtering"> + <option value="" selected="true">No filtering </option> + <option value="include">keep only matches </option> + <option value="exclude">Exclude matches </option> + </param> + <param name="description" type="boolean" checked="true" label="Show Description" help="Show description" /> + </repeat> + + <param name="column_labels" type="select" label="Tabular Report Column Labels" help=""> + <option value="label" selected="True">Short name</option> + <option value="field">Field name</option> + <option value="">No labels</option> + </param> + + <param name="html_template" type="select" optional="true" label="HTML Report template"> + <options from_data_table="blast_reporting_templates"/> + </param> + + </inputs> + <outputs> + + <data format="tabular" name="tabular_file" label="Tabular report for data $blastxml_file.hid" /> + <data format="html" name="html_file" label="HTML report for data $blastxml_file.hid"> + <filter>html_template != ""</filter> + </data> + <data format="tabular" name="selection_file" label="Sequence Selection List for data $blastxml_file.hid"> + <filter>out_format != "std"</filter> + </data> + </outputs> + + <tests> + <test><!-- Test taken from original BLAST to xml tool --> + <param name="blastxml_file" value="blastx_sample.xml"/> + <output name="tabular_file" file="blastx_sample_converted.tabular"/> + <param name="out_format" value="std"/> + <param name="column_labels" value="" /> + <param name="drop_redundant_hits" value="False"/> + </test> + + <test> + <param name="blastxml_file" value="blast_reporting_1.blastxml"/> + <output name="tabular_file" file="blast_reporting_1a.tabular"/> + <param name="out_format" value="std"/> + <param name="column_labels" value="" /> + <param name="drop_redundant_hits" value="True"/> + </test> + + <test> + <param name="blastxml_file" value="blast_reporting_1.blastxml"/> + <output name="tabular_file" file="blast_reporting_1b.tabular"/> + <param name="out_format" value="std"/> + <param name="column_labels" value="" /> + <param name="drop_redundant_hits" value="True"/> + + <param name="filter_num_0|filter_column" value="pident"/> + <param name="filter_num_0|constraint_0|filter_comparison" value="gte"/> + <param name="filter_num_0|constraint_0|filter_value" value="97"/> + + </test> + + <test> + <param name="blastxml_file" value="blast_reporting_1.blastxml"/> + <output name="tabular_file" file="blast_reporting_1c.tabular"/> + <output name="selection_file" file="blast_reporting_1c1.tabular"/> + + <param name="out_format" value="ext+"/> + <param name="column_labels" value="" /> + <param name="drop_redundant_hits" value="True"/> + + <param name="filter_num_0|filter_column" value="pident"/> + <param name="filter_num_0|constraint_0|filter_comparison" value="gte"/> + <param name="filter_num_0|constraint_0|filter_value" value="97"/> + + <param name="fields_0|field" value="pident"/> + <param name="fields_0|group" value="column"/> + <param name="fields_0|sort" value="asc"/> + + <param name="column_labels" value="label"/> + + </test> + + </tests> + + <help><![CDATA[ + +.. class:: infomark + +**What it does** + +NCBI BLAST+ searches can output in a range of formats, but in the past only +the XML format included fields like sequence description. +This tool converts the BLAST XML report into 12, 24, 26 or custom column tabular + and HTML reports. This tool is loosely based on the ''BLAST XML to tabular'' tool + available in main toolshed. For the default 12 and 24 column reports, it should +produce the same output although whitespace differences may exist. + +====== ============= ============================================ +Column NCBI name Description +====== ============= ============================================ + 1 qseqid Query Seq-id (ID of your sequence) + 2 sseqid Subject Seq-id (ID of the database hit) + 3 pident Percentage of identical matches + 4 length Alignment length + 5 mismatch Number of mismatches + 6 gapopen Number of gap openings + 7 qstart Start of alignment in query + 8 qend End of alignment in query + 9 sstart Start of alignment in subject (database hit) + 10 send End of alignment in subject (database hit) + 11 evalue Expectation value (E-value) + 12 bitscore Bit score + . + 13 sallseqid All subject Seq-id(s), separated by a ';' + 14 score Raw score + 15 nident Number of identical matches + 16 positive Number of positive-scoring matches + 17 gaps Total number of gaps + 18 ppos Percentage of positive-scoring matches + 19 qframe Query frame + 20 sframe Subject frame + 21 qseq Aligned part of query sequence + 22 sseq Aligned part of subject sequence + 23 qlen Query sequence length + 24 slen Subject sequence length + . + 25 pcov Percentage coverage + 26 sallseqdescr All subject Seq-descr(s), separated by a ',' +====== ============= ============================================ + +An option also exists to select particular columns for the output +report, and to cross-reference each result with one or more reference bins.l +A command line version can be used. Type blast_reporting.py -h for help. + +**python blast_reporting.py in_file out_file out_format [options]** + +.. class:: warningmark + +As noted in the original BLAST XML to tabular tool, ''Be aware that the XML file (and thus the conversion) and the tabular output direct from BLAST+ may differ in the presence of XXXX masking on regions low complexity (columns 21 and 22), and thus also calculated figures like the percentage identity (column 3) and gap openings.'' + +**References** + +If using this tool for publishing results, you may need to cite its origin in the BLAST XML to tabular tool: + +Peter J.A. Cock, Björn A. Grüning, Konrad Paszkiewicz and Leighton Pritchard (2013). +Galaxy tools and workflows for sequence analysis with applications +in molecular plant pathology. PeerJ 1:e167 +http://dx.doi.org/10.7717/peerj.167 + + ]]></help> + <citations> + <citation type="doi">10.7717/peerj.167</citation> + </citations> +</tool>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/blast_reporting_fields.tab Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,34 @@ +#value type subtype sort filter default min max choose short_name name +# Remember to edit tool_data_table_conf.xml for column spec! +length numeric int 1 1 1 Length Alignment length +qstart numeric int 1 1 1 Q. Start Alignment start in query +qend numeric int 1 1 1 Q. End Alignment end in query +sstart numeric int 1 1 1 S. Start Alignment start in subject +send numeric int 1 1 1 S. End Alignment end in subject +qseq text atgc 0 1 1 Q. Alignment Aligned part of query sequence +sseq text atgc 0 1 1 S. Alignment Aligned part of subject sequence +mseq text atgc 0 1 1 Alignment Alignment, matched part +# +bitscore numeric int 1 1 1 Bit Score Bit score +evalue numeric float 1 1 1 E-value Expectation value +pcov numeric int 1 1 1 % Coverage % coverage +gapopen numeric int 1 1 1 Gaps-openings # of gap openings +gaps numeric int 1 1 1 Gaps Total number of gaps +mismatch numeric int 1 1 1 Mismatches # of mismatches +nident numeric int 1 1 1 Ident. Matches # of identical matches +positive numeric int 1 1 1 Pos. Matches # of positive-scoring matches +pident numeric float 1 1 97 90 100 1 % Identical % of identical matches +ppos numeric float 1 1 1 % Positive % of positive-scoring matches +score numeric int 1 1 1 Raw Score Raw Score +# +qseqid text int 1 1 1 Query Id Query sequence id +qframe numeric int 1 1 1 Query Frame Query frame +qlen numeric int 1 1 1 Query Length Query sequence length +# +accessionid text 1 1 1 Accession Subject accession id +sframe numeric int 1 1 1 Subject Frame Subject frame +sallseqdescr text 0 1 1 Subject Descriptions Subject sequence desc(s) (all) +sseqdescr text 1 1 1 Subject Description Subject sequence desc. (first) +sseqid text int 1 1 1 Subject Id Subject sequence id +sallseqid text 1 1 1 Subject Ids Subject sequence ids (all) +slen numeric int 1 1 1 Subject Length Subject sequence length
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/common.py Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,523 @@ +import os.path +import sys +import re +import optparse +import subprocess +from shutil import move +import csv + +re_default_query_id = re.compile("^Query_\d+$") + #assert re_default_query_id.match("Query_101") + #assert not re_default_query_id.match("Query_101a") + #assert not re_default_query_id.match("MyQuery_101") +re_default_subject_id = re.compile("^(Subject_|gnl\|BL_ORD_ID\|)\d+$") #requires some kind of numeric id + #assert self.re_default_subject_id.match("gnl|BL_ORD_ID|221") + #assert re_default_subject_id.match("Subject_1") + #assert not re_default_subject_id.match("Subject_") + #assert not re_default_subject_id.match("Subject_12a") + #assert not re_default_subject_id.match("TheSubject_1") + # Spot sequence ids that have accession ids in them +re_default_ncbi_id = re.compile("^gi\|\d+\|[a-z]+\|[a-zA-Z0-9_]+(\.\d+)?\|") +re_default_ref_id = re.compile("^ref\|[a-zA-Z0-9_]+\|[a-zA-Z0-9_]+(\.\d+)?\|") + + +def stop_err( msg ): + sys.stderr.write("%s\n" % msg) + sys.exit(1) + +class MyParser(optparse.OptionParser): + """ + From http://stackoverflow.com/questions/1857346/python-optparse-how-to-include-additional-info-in-usage-output + Provides a better class for displaying formatted help info in epilog() portion of optParse; allows for carriage returns. + """ + def format_epilog(self, formatter): + return self.epilog + + + +## *********************************** FieldFilter **************************** +class FieldFilter(object): + + def __init__(self, tagGroup, options): + """ Creates dicitionary of fields that are to be filtered, and array of comparators and their values. + Numeric filters have a single numeric value + Each text filter is a string of phrases separated by "|" + + e.g. filters = "pident: > 97,score: > 37,sallseqdescr includes what | have|you" + + @param filters string e.g. "[ [field name]: [comparator] [value],[[comparator] [value],]* ]* + @result .dict dictionary contains field name keys and arrays of [comparator, filterValue] + + """ + self.dict = {} + self.comparators = { + '==': lambda x,y: float(x) == float(y), + '!=': lambda x,y: float(x) != float(y), + 'gt': lambda x,y: float(x) > float(y), + 'gte': lambda x,y: float(x) >= float(y), + 'lt': lambda x,y: float(x) < float(y), + 'lte': lambda x,y: float(x) <= float(y), + 'includes': self.includesPhrase, + 'excludes': self.excludesPhrase + } + self.matches = {} + self.drop_redundant_hits = options.drop_redundant_hits + + + + if options.filters != None: + cleaned_filters = [] + for colPtr, filterParam in enumerate(options.filters.strip().strip(';').split(';')): + filterSpec = filterParam.strip().split(":") + filterField = filterSpec[0].strip() + if len(filterField) > 0: + if filterField in self.dict: + stop_err("Filter field listed twice: \"" + filterField + "\". Please move constraints up to first use of field!") + field_name = cleanField(tagGroup.columns_in, filterField, 'Invalid field for filtering eh') + if len(filterSpec) > 1: #we have start of filter field defn. "[field]:[crit]+," + + self.dict[field_name] = [] #new entry for filter field + + for filterParam in filterSpec[1].strip().strip(',').split(','): + filterSpec2 = filterParam.strip().split(' ') + comparator = filterSpec2[0] + if not comparator in self.comparators: + stop_err("Invalid comparator for field filter: \"" + comparator + "\"") + if len(filterSpec2) < 2: + stop_err("Missing value for field comparator: \"" + comparator + "\"") + + #For text search, values are trimmed array of phrases + if comparator in ['includes','excludes']: + filterValue = list(map(str.strip, ' '.join(filterSpec2[1:]).split('|'))) + filterValue = filter(None, filterValue) + else: + filterValue = filterSpec2[1] + + self.dict[field_name].append([comparator, filterValue]) + + cleaned_filters.append(field_name + ':' + filterSpec[1]) + + options.filters = ';'.join(cleaned_filters) + # Adjust filter expression fieldnames. + words = {'gt':'>', 'gte':'>=', 'lt':'<', 'lte':'<=',',':'',':':' '} + options.filters_HTML = word_replace_all(options.filters, words) + words = {'gt':'>', 'gte':'>=', 'lt':'<', 'lte':'<=',',':'',':':' '} + options.filters = word_replace_all(options.filters, words) + + else: + options.filters = None + options.filters_HTML = '' + + def __str__(self): + return "label: %s dict: %s" % (self.label, str(self.dict)) + + def includesPhrase(self, source, filter_phrases): + """ Search for any words/phrases (separated by commas) in commastring in source string + @param source string Words separated by whitespace + @param filter_phrases array of phrases + + """ + return any(x in source for x in filter_phrases) + + def excludesPhrase(self, source, commastring): + return not self.includesPhrase(source, commastring) + + def process(self, record): + """ For given record (an object) cycle through filters to see if any of record's attributes fail filter conditions. + + FUTURE: MAKE GENERIC SO PASSED record field function for unique test.??? + + @uses self.dict + @uses self.drop_redundant_hits + @uses self.matches + @param record object An object containing field & values read from a <hit> line. + @return boolean True if all filter criteria succeed, false otherwise + + """ + + # Block out repeated hits + # THIS ASSUMES BLASTn XML file is listing BEST HIT FIRST. Only appropriate for searching for single hits within a reference sequence. + if self.drop_redundant_hits == True: + # parsing succession id from e.g. gi|57163783|ref|NP_001009242.1| rhodopsin [Felis catus] + #acc = str(record.sseqid.split('|')[3:4]).strip() + key = record.qseqid + '-' + record.accessionid #acc + if key in self.matches: + return False + self.matches[key] = True + + for key, constraints in self.dict.items(): + try: # The .loc table of fields has fieldnames without leading _ underscore. + # Such fields are assumed to be added by code; + # Leading underscore fields are raw values read from XML file directly. + # Our filter names don't have underscore, but we see if underscore field exists if normal attr check fails + value = getattr(record, key) + for ptr, constraint in enumerate(constraints): + comparator = constraint[0] + userValue = constraint[1] + # print "constraint " + str(value) + comparator + str(userValue) + " -> " + \ + # str (self.comparators[comparator](value, userValue) ) + if not self.comparators[comparator](value, userValue): + return False #failed a constraint + except AttributeError: + print 'A filter on field [' + key + '] was requested, but this field does not exist.' + raise KeyError + + return True + + + +class FieldSpec(object): + + def __init__(self, file_path, columns_in = []): + """ READ FIELD SPECIFICATIONS of a particular galaxy tool form/process from a .loc 'tabular data' file + + Example blast_reporting_fields.tab file + + #value type subtype sort filter default min max choose name + # Remember to edit tool_data_table_conf.xml for column spec! + qseqid numeric int 1 1 1 Query Seq-id + sseqid numeric int 1 1 1 Subject Seq-id + pident numeric float 1 1 97 90 100 1 Percentage of identical matches + + - value is name of field: alphanumeric strings only. + - type is 'text' or 'numeric' or 'bin' + - subtype where applicable, indicates further validation function + - sort indicates if field should be provided in sort menu + - filter indicates if field should be in menu of fields that can be filtered + - default is default value field should have if drawn on form + - min is minimum range of field + - max is maximum range of field + - choose indicates if field can be chosen for an output column (some are mandatory / some are to be avoided?) + - name is textual name of field as it should appear on pulldown menus + + @param file_path string full name and path of .loc file containing pertinent field names and their specifications. + @result .dict dictionary + + """ + self.dict = {} + self.columns_in = columns_in + + with open(file_path, 'rb') as f: + reader = csv.DictReader(f, delimiter='\t') #1st row read as field name header by default + try: + for row in reader: + myKey = row['#value'] + # Some lines begin with '#' for value. Ignore them + # Also, reader has read column names from first row; "#value" is name of first column + if not myKey[0] == '#': # 1st character is not a hash + row.pop("#value", None) + self.dict[myKey] = row + # self.dict[myKey]['value']=row['#value'] # If we need this ever? + + + except csv.Error as e: + stop_err('file %s, line %d: %s' % (filename, reader.line_num, e)) + + + def initColumns(self, columns_out, custom_columns): + """ + # Augment columns with fieldSpec label and some sorting defaults. + # Default sorts: qseqid is marked as sorted asc; score as sorted desc. + # No need to move sorted fields around. + # This basically creates spec to generate tab-delimited file. + # The only other calculation done for that is the row_limit cut, if any. + """ + column_spec = list(columns_out) + for (i, spec) in enumerate(column_spec): + spec_field = spec.lstrip("_") + + if spec_field == 'qseqid': + sort = 'asc' + group = 'section' + elif spec_field == 'score': + sort = 'desc' + group = 'column' + else: + sort = '' + group = 'column' + + field = { + 'field': spec, + 'group': group, + 'sort': sort, + 'label': self.getAttribute(spec_field, 'short_name'), + 'type': self.getAttribute(spec_field, 'type') + } + column_spec[i] = field + + """ + # For the HTML (OR XML) report we allow users to specify columns of data to represent sections of the report or table sections. + # Selected columns either enhance an existing column's info, or add a new column. + # If a selected column is sorted, it is inserted/moved to after last SORTED column in data. + # In other words, primary/secondary etc sorting is preserved. + """ + if custom_columns != None: + + + custom_spec = [x.strip() for x in custom_columns.split(';')] + for spec in custom_spec: + params = [i.strip() for i in spec.rstrip(":").split(":")] + parlen = len(params) + if parlen > 0 and params[0] != '': + field_name = cleanField(self.columns_in, params[0]) # Halts if it finds a field mismatch + + group = 'column' + sort = '' + if parlen > 1 and params[1] in ['column','hidden','table','section']: group = params[1] + if parlen > 2 and params[2] in ['asc','desc']: sort = params[2] + + # Enforce sort on section and table items.... + + # All self.column_spec have a fieldspec entry. Get default label from there. + # HOW TO HANDLE CALCULATED FIELD LABELS? ENSURE THEY HAVE ENTRIES? + spec_field = field_name.lstrip("_") + label = self.getAttribute(spec_field, 'short_name') + if parlen > 3: label = params[3] + + field = { + 'field': field_name, + 'group': group, + 'sort': sort, + 'label': label, + 'type': self.getAttribute(spec_field, 'type') + } + + # If field is a 'section' move it right after last existing 'section' (if not matched) + # if its a 'table' move it after last existing 'table' (if not matched) + # otherwise append to column list.(if not matched) + + found = False # if found== true, rest of loop looks for existing mention of field, and removes it. + for (ptr, target) in enumerate(column_spec): + + found_name = spec_field == target['field'].lstrip("_") + if (found == True): + if (found_name): # Found duplicate name + del column_spec[ptr] + break + elif (found_name): + found = True + column_spec[ptr] = field # Overwrite spec. + break + + elif (field['group'] == 'section'): + if (target['group'] != 'section'): # time to insert section + found = True + column_spec.insert(ptr, field) + + elif (field['group'] == 'table'): + if (target['group'] == 'column' or target['group'] == 'hidden'): + found = True + column_spec.insert(ptr, field) + + if found == False: # didn't find place for field above. + column_spec.append(field) + # print ("col spec: " + str(column_spec)) + + return column_spec + + + + def getAttribute(self, fieldName, attribute): + """ Retrieve attribute of a given field + + @param fieldName string + @param attribute string + @return string value of attribute + + """ + return self.dict[fieldName][attribute] + + +def word_replace_all(text, dictionary): + textArray = re.split('(\W+)', text) #Workaround: split() function is not allowing words next to punctuation. + for ptr,w in enumerate(textArray): + if w in dictionary: textArray[ptr] = dictionary[w] + return ''.join(textArray) + + +def cleanField(columns_in, field_name, msg = 'Not a valid field name'): + + if not field_name.replace('_','').isalnum(): + stop_err(msg + ': [' + field_name+']') + if field_name in columns_in: + clean = field_name + elif '_' + field_name in columns_in: #passed from source file + clean = '_' + field_name + else: #column not found here + stop_err(msg + ':'+ field_name + '- no such field') + return clean + + +def fileSort (out_file, fields): + """ + fileSort() uses linux "sort" to handle possibility of giant file sizes. + List of fields to sort on delivered in options.sorting string as: + + [{name:[field_name],order:[asc|desc],label:[label]},{name ... }] etc. + + Match "sorts" fields to columns to produce -k[col],[col] parameters that start and end sorting + Note that sort takes in columns with primary listed first, then secondary etc. + Note that file to be sorted can't have 1st line column headers. + + sort attributes: + + -f ignore case; + -r reverse (i.e. descending)Good. + -n numeric + -k[start col],[end col] range of text that sort will be performed on + -s stabilize sort : "If checked, this will stabilize sort by disabling its last-resort comparison so that lines in which all fields compare equal are left in their original relative order." Note, this might not be available on all linux flavours? + -V sorts numbers within text - if number is leading then field essentially treated as numeric. This means we don't have to specify -n for numeric fields in particular + + Note: some attention may need to be given to locale settings for command line sort + May need to set export LC_ALL=C or export LANG=C to ensure same results on all systems + + @param out_file string File path of file to resort + @param sorts string Comma-separated list of fields to sort, includes ascending/descending 2nd term;each field validated as an alphanumeric word + underscores. + @param prelim_columns dictionary of files column header names + """ + + sortparam = [] + for colPtr, field in enumerate(fields): + if field['sort']: + field_name = field['field'] + if not field_name.replace('_','').isalnum(): + stop_err("Invalid field to sort on: " + field) + + #print "sort term:" + field + ":" + str(prelim_columns) + ordering = '' if field['sort'] == "asc" else 'r' + column = str(colPtr+1) + # V sorts numbers AND text (check server's version of sort + sortparam.append('-k' + column + 'V' + ordering + ',' + column) + + if len(sortparam) > 0: + args = ['sort','-s','-f','-V','-t\t'] + sortparam + ['-o' + out_file, out_file] + sort_a = subprocess.call(args) + + + +def fileTabular (in_file, tagGroup, options): + """Produces tabular report format. Takes in tabular data + metainformation about that file, and iterates through rows. Not a query-based approach. + It trims off the sort-only columns (prelim - final), + It optionally adds column label header. (not done in fileSort() because it gets mixed into sort there.) + NOTE: RUN THIS AFTER fileHTML() BECAUSE IT MAY TRIM FIELDS THAT HTML REPORT NEEDS + + @param in_file string Full file path + @param tagGroup object Includes prelim_columns, final_columns + @param options object Includes label_flag and row_limit + + """ + fp_in = open(in_file, "rb") + fp_out = open(in_file + '.tmp', 'wb') + + try: + + reader = csv.reader(fp_in, delimiter="\t") + writer = csv.writer(fp_out, delimiter="\t") + + # WRITE TABULAR HEADER + if options.column_labels: # options.column_labels in ['name','field']: + if options.column_labels == 'label': + tabHeader = [field['label'] for field in tagGroup.columns] + else: + # Tabular data header: strip leading underscores off of any labels... + tabHeader = [field['field'].lstrip('_') for field in tagGroup.columns] + + writer.writerow(tabHeader) + + for row in reader: + + rowdata=[] + for (idx, field) in enumerate(tagGroup.columns): # Exclude hidden columns here? + rowdata.append(row[idx]) + writer.writerow(rowdata) + + move(in_file + '.tmp', in_file) # Overwrites in_file + + except IOError as e: + print 'Operation failed: %s' % e.strerror + + fp_in.close() + fp_out.close() + + + +def fileSelections (in_file, selection_file, tagGroup, options): + """ Produces selection report format. + For selection file we need: qseqid, qseq, sseqid, sseq, and # + + @param in_file string Full file path + @param tagGroup object Includes prelim_columns, final_columns + @param options object Includes label_flag and row_limit + + """ + fp_in = open(in_file, "rb") + + if selection_file != 'None': + fp_out = open(selection_file, 'w') + + + try: + + reader = csv.reader(fp_in, delimiter="\t") + writer = csv.writer(fp_out, delimiter="\t") + + for (idx, field) in enumerate(tagGroup.columns): + fieldname = field['field'] + if fieldname == 'qseqid': qseqid_col = idx + elif fieldname == '_qseq': qseq_col = idx + elif fieldname == 'sseqid': sseqid_col = idx + elif fieldname == '_sseq': sseq_col = idx + # else: stop_err("You : " + field) + + selectrow_count = 0 + grouping = -1 + old_section = '' + for row in reader: + + selectrow_count +=1 + if row[qseqid_col] != old_section: + old_section = row[qseqid_col] + grouping +=1 + writer.writerow([row[qseqid_col], row[qseq_col], grouping, selectrow_count]) + selectrow_count +=1 + + writer.writerow([row[sseqid_col], row[sseq_col], grouping, selectrow_count]) + + + except IOError as e: + print 'Operation failed: %s' % e.strerror + + fp_in.close() + fp_out.close() + +def testSuite(test_ids, tests, output_dir): + + if test_ids == 'all': + test_ids = sorted(tests.keys()) + else: + test_ids = test_ids.split(',') + + for test_id in test_ids: + if test_id in tests: + test = tests[test_id] + test['base_dir'] = os.path.dirname(__file__) + # Each output file has to be prefixed with the output folder + test['tmp_output'] = (' ' + test['outputs']).replace(' ',' ' + output_dir) + # Note: output_dir output files don't get cleaned up after each test. Should they?! + params = '%(base_dir)s/blast_reporting.py %(base_dir)s/test-data/%(input)s%(tmp_output)s %(options)s' % test + print("Testing" + test_id + ': ' + params) + os.system(params) + for file in test['outputs'].split(' '): + #print(os.system('diff --suppress-common-lines ./test-data/%s %s%s' % (file, output_dir, file))) + f1 = open(test['base_dir'] + '/test-data/' + file) + f2 = open(output_dir + file) + import difflib #n=[number of context lines + diff = difflib.context_diff(f1.readlines(), f2.readlines(), lineterm='',n=0) + # One Galaxy issue: it doesn't convert entities when user downloads file. BUT IT DOES when generating directly to command line? + print '\nCompare ' + file + print '\n'.join(list(diff)) + + else: + stop_err("\nExpecting one or more test ids from " + str(sorted(tests.keys()))) + + stop_err("\nTest finished.")
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/fasta_reference_dbs.tab Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,9 @@ +#value key type active name path +# Add list of reference database file names here, (remove .csv suffix) and applicable columns +# Reference databases need to be together in the ... /usr/local/galaxy/shared/bccdc_tools/tool-data/blast_report/bins/ folder +# NOTE: These are necessary (i.e. must be uncommented) if reference bins are used. +16S_euzby 16S 1 Euzby /usr/local/galaxy/shared/ngs_data/ +16S_ncbi 16S 1 16S Microbial (NCBI) /usr/local/galaxy/shared/ngs_data/ +16S_rdp 16S 1 16S RDP /usr/local/galaxy/shared/ngs_data/ +CPN60 CPN60 1 CPN60 Chaperonin /usr/local/galaxy/shared/ngs_data/ +hisA_burkholderia hisA 1 hisA Burkholderia /usr/local/galaxy/shared/ngs_data/
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/panel_layout.css Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,29 @@ + +/* panel_layout.css + To pretty up the display of this reporting tool add the following lines to your galaxy's panel_layout.css file + Galaxyproject.org installations normally have this file located in cp /usr/lib/galaxy-server/static/june_2007_style/blue/panel_layout.css +*/ + +div[id*="bccdcBLASTreporting"] form > div.form-row > label {width:180px;float:left} +div[id*="bccdcBLASTreporting"] form > div > div.form-row > div.form-row-input {display:inline-block;width:auto} + +div[id*="bccdcBLASTreporting"] .repeat-group-item {border:none;margin:0} + +div[id*="bccdcBLASTreporting"] form > div > .repeat-group * {vertical-align:top} +div[id*="bccdcBLASTreporting"] form > div > .repeat-group {border:1px solid silver;border-radius:10px;background-color:whitesmoke;margin:5px 10px 0 10px} +div[id*="bccdcBLASTreporting"] form > div > .repeat-group > .form-title-row {display:none} +div[id*="bccdcBLASTreporting"] form > div > .repeat-group > .repeat-group-item {clear:left} +div[id*="bccdcBLASTreporting"] form > div > .repeat-group > .form-row {border-top:1px solid silver} + +div[id*="bccdcBLASTreporting"] form > div > .repeat-group > .repeat-group-item > .form-row > label {display:none} +div[id*="bccdcBLASTreporting"] form > div > .repeat-group > .repeat-group-item > .form-title-row {display:inline-block} +div[id*="bccdcBLASTreporting"] form > div > .repeat-group > .repeat-group-item > .form-row {display:inline-block} +div[id*="bccdcBLASTreporting"] form > div > .repeat-group > .repeat-group-item > .repeat-group {display:inline-block} +div[id*="bccdcBLASTreporting"] form > div > .repeat-group > .repeat-group-item > .repeat-group .form-title-row {display:none} +div[id*="bccdcBLASTreporting"] form > div > .repeat-group > .repeat-group-item > .repeat-group > .repeat-group-item {width:auto} +div[id*="bccdcBLASTreporting"] form > div > .repeat-group > .repeat-group-item > .repeat-group > .repeat-group-item > .form-row {display:inline-block;width:auto} + +div[id*="bccdcBLASTreporting"] form > div > .repeat-group > .repeat-group-item > .form-row > input.btn {float:left} +div[id*="bccdcBLASTreporting"] form > div > .repeat-group > .repeat-group-item > .form-row > input.btn[name$=_remove] {width:70px;height:25px; display:inline-block} +div[id*="bccdcBLASTreporting"] .toolParamHelp {display:inline-block; padding-left:15px; clear:none !important;padding-top:4px} +
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/reference_bins.py Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,148 @@ +import os.path +import common + +class ReferenceBins: + + def __init__(self, db_spec_path = None): + """ + @param db_spec_path string path to fasta databases specification file. This file has format: + #value id type active name path + 16S_euzby 16S 1 Euzby /usr/local/galaxy/shared/ngs_data/ + ... + """ + self.reference_bins = [] + + if db_spec_path == None: # Default to the command-line lookup table in code's folder: + db_spec_path = os.path.join(os.path.dirname(__file__), 'fasta_reference_dbs.tab') + self.fieldSpec = common.FieldSpec(db_spec_path) + + def __main__(self): pass + + # Could double check to see if it exists? + def build_bins(self, bins, columns): + + if bins == None: + self.reference_bins = [] + return False + + for myfield in bins.strip().strip(';').split(';'): + field_spec = myfield.strip().split(':') + field_name = field_spec[0].strip() + + if field_name != '': + if not field_name.replace('_','').isalnum(): + common.stop_err("Invalid bin name: " + field_name + ':' + myfield) + + if len(field_spec) < 2: field_spec.append('column') # default grouping = column + if len(field_spec) < 3: field_spec.append('') # default filtering = none + if len(field_spec) < 4: field_spec.append('') # default no description + + grouping = field_spec[1].strip() + if not grouping in ['table', 'column', 'hidden']: + common.stop_err("Invalid bin layout: " + grouping) + + bin_filter = field_spec[2].strip() + if not bin_filter in ['', 'include', 'exclude']: + common.stop_err("Invalid bin sort: " + bin_filter) + + newbin = self.buildBin(field_name, bin_filter) + self.reference_bins.append(newbin) + + field = { # any time we have a bin we want sort descending + 'field': field_name, + 'group': grouping, + 'sort': 'desc', + 'label': newbin.name, + 'type': 'bin' + } + columns.append(field) + if (field_spec[3] == 'true'): # description field requested + field = { + 'field': field_name + '_desc', + 'group': 'column', + 'sort': '', # Allow other sorts???? + 'label': newbin.name + ' Description', + 'type': 'text' + } + columns.append(field) + + + def buildBin(self, bin_folder_name, bin_filter): + """ + Create a lookup table consisting of a dictionary entry for each accession id held in dictionary's file. + @param bin_folder_name string name of requested db, e.g 16S_ncbi + @param bin_filter string '' or 'include' or 'exclude' + + """ + bin = ReferenceBin(self.fieldSpec, bin_folder_name, bin_filter) + + try: + with open(bin.file_path) as file_in: + for line in file_in: # Should always contains succession id + #FUTURE: Preprocess so accession ID ready to go. + keyValue = line.rstrip().split("\t",1) + # keep only first term minus integer portion of id + accGeneralId = keyValue[0].split('.')[0] + if len(keyValue) >1: description = keyValue[1] + else: description = '' + bin.lookup[accGeneralId] = description + + file_in.close() + + except IOError: + stop_err("Reference bin could not be found or opened: " + self.path + bin_folder_name + '/accession_ids.tab') + + return bin + + def setStatus(self, record): + + if len(self.reference_bins) == 0: return #no bins + + # Use of "extended slices" http://docs.python.org/2.3/whatsnew/section-slices.html + # Example sallseqid is 'gi|194753780|ref|XR_046072.1|;gi|195119578|ref|XR_047594.1|;gi|195154052|ref|XR_047967.1|' + # Example accs is ['XR_046072.1', 'XR_047594.1', 'XR_047967.1'] + # Original code was "[1::2][1::2]" (select every 2nd item, then every 2nd item of that) + accs = record.sallseqid.split('|') + + if common.re_default_ncbi_id.match(record.sseqid): + accs = accs[3::4] #Select every 4th item starting offset 4 + + elif common.re_default_ref_id.match(record.sseqid): + accs = accs[1::2] + + + # Check each accession # against each bin. + for ptr, bin in enumerate(self.reference_bins): + setattr(record, bin.field, '') #Using '','1' not FALSE/TRUE because of tab delim output + setattr(record, bin.field + '_desc', '') + for acc in accs: + accGeneralId = acc.split('.')[0] + if accGeneralId in bin.lookup: + if bin.exclude: return False + setattr(record, bin.field, str(ptr+1)) + # Include any bin notes for this item + setattr(record, bin.field + '_desc', bin.lookup[accGeneralId]) + break # This result has been binned to this bin so break. + + + + + def __str__(self): + return "name: %s dict: %s" % (self.name, str(self.lookup)) + +class ReferenceBin: + def __init__(self, fieldSpec, bin_folder_name, bin_filter): + self.lookup = {} + self.folder = bin_folder_name + self.name = fieldSpec.getAttribute(bin_folder_name, 'name') + self.field = bin_folder_name + self.path = fieldSpec.getAttribute(bin_folder_name, 'path') + self.exclude = bin_filter + #absolute path to reference bins folder: /usr/local/galaxy/shared/ngs_data/ + self.file_path = os.path.join(self.path + self.folder + '/accession_ids.tab') + +if __name__ == '__main__': + + binManager = ReferenceBins() + binManager.__main__() +
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/templates/html_report.py Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,329 @@ +import os.path +import time +import csv +import collections +import re + +HTML_REPORT_HEADER_FILE = 'html_report_header.html' + +class HTMLReport(object): + + """ This receives and sets up the general meta-data fields available to the html rendering engine + + """ + def __init__(self, tagGroup, options, query_stats = []): + + self.columns = tagGroup.columns + self.display_columns = [field for field in self.columns if field['group']=='column'] + self.row_limit = options.row_limit + self.section_bins = {} + self.todo = collections.deque([]) # stack of things to do + self.query_stats = query_stats + self.empty_queries = [query['id'] for query in query_stats if query['filtered_rows'] == 0] + self.initialized = False + self.errorNotice = '' + + # These items are available for display in html generation via dictionary string replacement: [string ... %(filters)s ...] % self.lookup + self.lookup = { + 'depth': 0, + 'filters': 'Filters: ' + options.filters_HTML if len(options.filters_HTML) else '', + 'timestamp': time.strftime('%Y/%m/%d'), + 'visible_limit': 20, + 'column_count': str(len([field for field in self.columns if field['group']=='column'])), + 'table_rows':0, + 'select_row':0, + 'row_limit': self.row_limit, + 'label':'', + 'value':'', + 'link':'', + 'cssClass':'', + 'table_header': self._tableHeader(), + 'section_bins':'', + 'section_counter':1 + } + + self.initialized = True + + #else: + # add error notice for non-initialized template: + # self.errorNotice = '<div style="width:400px;margin:auto"><h3>This HTML Report could not be initialized ...</h3></div>' + + + """ + _processTagStack() + In the production of html, start tags and template bits are added to the outgoing html when designated section columns of data change value. the self.todo stack keeps track of all the tag closings that have to occur when a section or table section comes to an end (and new one begins or end of document occurs). + + This dynamically executes any functions listed in stack that are greater than given tag depth. + Generally the functions return html closing content. + + @param depth integer >= 0 + @uses self.todo stack of [depth, function_name] items + """ + def _processTagStack(self, depth = 0): + html = '' + while len(self.todo) and self.todo[0][0] >= depth: + html += getattr(self, self.todo.popleft()[1] )() + return html + + + + ############################### HTML REPORT RENDERING ############################## + """ render() produces the html. Takes in tabular data + metainformation about that file, and iterates through rows. This approach depends on detecting changes in stated report section columns and table section columns, and triggers appropriate section start and end, and table / table section start and end tags. + + @param in_file string Full file path + @param out_html_file string Full output html data file path to write to. + """ + def render (self, in_file, out_html_file): + + try: + + fp_in = open(in_file, "rb") + fp_out = open(out_html_file, 'w') + + fp_out.write( self._header(HTML_REPORT_HEADER_FILE) ) + + if self.initialized: + + fp_out.write( self._bodyStart() ) + self.todo.appendleft([0,'_bodyEnd']) + + + reader = csv.reader(fp_in, delimiter="\t") + + for row in reader: + + html = '' + self.rowdata = [] + row_bins = [] + section_reset = False + + for (idx, field) in enumerate(self.columns): + + value = field['value'] = row[idx] + depth = idx + 1 + + # If a bin is mentioned on this row, its put into self.selection_bins. + if field['type'] == 'bin' and value != '': + row_bins.append(value) + if not value in self.section_bins: + self.section_bins[value] = field['label'] + + grouping = field['group'] + # Section or table grouping here: + if grouping == 'section' or grouping == 'table': + + # Check to see if a new section or table section is triggered by change in field's value: + if section_reset or (not 'valueOld' in field) or value != field['valueOld']: + + self.lookup['value'] = value + self.lookup['label'] = field['label'] + + html += self._processTagStack(depth) + + if grouping == 'section': + section_reset = True + self.lookup['section_depth'] = depth + self.lookup['section_counter'] += 1 + self.lookup['table_rows'] = 0 + self.section_bins = {} + + html += self._sectionStart() + + html += self._sectionFormStart() + self.todo.appendleft([depth,'_sectionFormEnd']) + + self.todo.appendleft([depth,'_sectionEnd']) + + + elif grouping == 'table': + + lastToDo = self.todo[0] + if lastToDo[1] == '_sectionEnd': + html += self._tableStart() + self.todo.appendleft([lastToDo[0]+1,'_tableEnd']) + + html += self._tbodyHeader() + self._tbodyStart() + self.todo.appendleft([lastToDo[0]+2,'_tbodyEnd']) + + field['valueOld'] = value + + else: + + if grouping == 'column': self.rowdata.append(row[idx]) + + lastToDo = self.todo[0] + # No table level, instead going right from section to column field: + if lastToDo[1] == '_sectionEnd': + html += self._tableStart() + self._tbodyStart() + self.todo.appendleft([lastToDo[0]+1,'_tableEnd']) + self.todo.appendleft([lastToDo[0]+2,'_tbodyEnd']) + + self.lookup['row_bins'] = ",".join(row_bins) + fp_out.write(html) + self.lookup['table_rows'] += 1 + # Now output table row of data: + fp_out.write( self._tableRow() ) + + + #Not initialized here, so just write created error notice. + else: + + fp_out.write('<body><h3>' + self.errorNotice + '</h3></body></html>') + + fp_out.write( self._processTagStack() ) + + except IOError as e: + print 'Operation failed: %s' % e.strerror + + fp_in.close() + fp_out.close() + + + ############################### HTML REPORT PART TEMPLATES ############################## + def _header(self, filename): + + with open(os.path.join(os.path.dirname(__file__), filename), "r") as fphtml: + data = fphtml.read() + + return data + + + def _bodyStart(self): + # The form enables the creation of a dataset from selected entries. It passes selections (based on a certain column's value) to the "Select tabular rows" tool, which then creates a dataset from the selected rows. + html = """ + """ + if len(self.empty_queries): + qnames = '' + for name in self.empty_queries: qnames += '<li>' + name + '</li>\n' + html += """ + <div class="headerMessage">The following queries yielded 0 results (check filters): + <ul> + %s + </ul> + </div>""" % qnames + + return html % self.lookup + + # Repeated for each grouped section table display + def _sectionStart(self): + self.lookup['select_row'] +=1 + return """ + <div class="section section_depth%(section_depth)s"> + <div class="section_title">%(label)s: %(value)s</div> + """ % self.lookup + + + + def _sectionFormStart (self): + # This sets up the selection form #../../../tool_runner/index + return "" + + def _tableStart (self): + + return """ + <table class="report"> + %(table_header)s + """ % self.lookup + + + def _tableHeader(self): + + colTags = '' # Style numeric fields + thTags = '' + + for field in self.columns: + if field['group'] == 'column': + colTags += ('<col />' if field['type'] == 'text' else '<col class="numeric" />') + thTags += '<th>' + field['label'] + '</th>' + + return """ + <colgroup> + %s + </colgroup> + <thead class="top"> + <tr>%s</tr> + </thead>""" % (colTags, thTags) + + def _tbodyHeader (self): + if self.lookup['value'] == '': self.lookup['value'] = '(no match)' + return """ + <thead class="inside"> + <tr> + <th colspan="%(column_count)s">%(label)s: %(value)s</th> + </tr> + </thead>""" % self.lookup + + def _tbodyStart (self): + return """ + <tbody>""" % self.lookup + + + def _tableRow(self): + self.lookup['select_row'] +=1 + + tdTags = '' + for (col, field) in enumerate(self.display_columns): + value = self.rowdata[col] + self.lookup['value'] = value + self.lookup['cssClass'] = ' class="numeric"' if field['type'] == 'numeric' else '' + accessionID = re.search(r'[a-z]+[0-9]+(.[0-9]+)*' ,value, re.I) + if (accessionID) : + self.lookup['link'] = '<a href="https://google.ca/#q=%s+gene" target="search">%s</a>' % (accessionID.group(), value) + else: + self.lookup['link'] = value + # First column optionally gets bin indicator as well as row checkbox selector + if (col == 0): + tdTags += '<td%(cssClass)s>%(link)s<span class="super">%(row_bins)s</span></td>' % self.lookup + else: + tdTags += '<td%(cssClass)s>%(value)s</td>' % self.lookup + + return """\n\t\t\t<tr>%s</tr>""" % tdTags + + def _tbodyEnd (self): + return """ + </tbody>""" + + def _tableEnd (self): + if len(self.section_bins): + bins = [] + for key in sorted(self.section_bins): + bins.append( '<span class="super">(%s)</span>%s' % (key, self.section_bins[key]) ) + self.lookup['section_bins'] = 'Bins: ' + ', '.join(bins) + else: + self.lookup['section_bins'] = '' + + return """ + <tfoot> + <tr> + <td colspan="%(column_count)s"> + <div class="footerCenter"> + %(filters)s. + </div> + <div class="footerLeft"> + <span class="rowViewer0"></span> %(table_rows)s results. + <span class="rowViewer1 nonprintable"></span> + %(section_bins)s + </div> + <div class="footerRight"> + Report produced on %(timestamp)s + </div> + + </td> + </tr> + </tfoot> + </table>""" % self.lookup + + def _sectionFormEnd (self): + return """ + + """ + + def _sectionEnd (self): + return """ + </div>""" + + + def _bodyEnd (self): + + return """\n\t</body>\n</html>""" +
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/templates/html_report_header.html Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,162 @@ +<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"> +<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"> + <head> + <meta http-equiv="Content-Type" content="text/html; charset=utf-8" /> + <meta name="generator" content="Galaxy %s tool output - see http://g2.trac.bx.psu.edu/" /> + <title>Galaxy Blast Search Reporting</title> + + <style> + body { + font-size:0.75em; font-family:arial + } + table, tr { + width: 100%; + } + table { + border-collapse: collapse; + border: 1px solid black; + } + tbody tr:first-child td { + border-top:3px solid black; + } + thead.top { + background-color: lightgrey; + } + thead.inside { + background-color: lightblue; + text-align:left + } + thead th {padding:3px;vertical-align:bottom} + thead > tr > th .sectionCheckbox { + position:absolute; + left:12px; + } + tfoot td {border-top: 1px solid black; text-align:center} + td.numeric { + text-align:right; + padding-left:15px; + white-space: nowrap} + td:first-child { + white-space: nowrap + } + td { vertical-align:top; + border-left: 1px solid black; + border-right: 1px solid black; + border-bottom: 1px dashed grey; + padding:3px; + } + .section { + page-break-after: always; + margin-top:5px; + margin-bottom:5px; + } + .section .section_title { + margin-bottom:5px; + } + + .section:last-child { + page-break-after: avoid; !important; + } + + tbody:first-child { + page-break-before: avoid; + } + + .section_depth1 > .section_title {font-size:1.3rem; color: blue;} + .section_depth2 > .section_title {font-size:.9rem; color: blue;} + .section_depth3 > .section_title {font-size:.8rem; color: blue;} + + .headerMessage {font-size: 1rem; font-weight:bold; border:1px solid black; padding:10px} + .headerMessage ul {font-size: .9rem; font-weight:normal} + + .sanitize_all_html_problem {display:none} + div.footerLeft {float:left;padding-right:20px} + div.footerRight {float:right;padding-left:20px} + div.footerCenter {display:inline-block} + + span.rowViewer1 {color:blue; cursor:pointer} + + span.super { + color: navy; + font-weight:bold; + font-size: 90%; + vertical-align: top; + } + + @media print + { + .nonprintable {display:none} + } + </style> + + <!-- Note, no external javascript required --> + <script> + + window.onload = function () { + visible_rows = 20; + + var tables = document.getElementsByTagName('TABLE'); + for (var ptr = 0; ptr < tables.length; ptr ++) { + viewTable(tables[ptr], false); + } + + function viewTable(table, showFlag) { + var row_count = 0; + var tbodies = table.getElementsByTagName('TBODY'); // So no thead/tfoot tr's. + for (var ptr1 = 0; ptr1 < tbodies.length; ptr1 ++ ) { + trs = tbodies[ptr1].getElementsByTagName('TR'); + for (var ptr2 = 0; ptr2 < trs.length; ptr2 ++ ) { + row_count ++; + // TR visibility cut off after visible_rows by default + trs[ptr2].style.display = (row_count <= visible_rows || showFlag) ? '' : 'none'; + } + } + initTableFooter(table, row_count, showFlag); + + var theaders = table.getElementsByTagName('THEAD'); + var inputToggle = theaders[0].getElementsByTagName('INPUT')[0]; + if (inputToggle) { + inputToggle.checked = false; + inputToggle.onchange = function() {toggleInputs(inputToggle, table)}; + } + } + + function initTableFooter(table, row_count, showFlag) { + // rowViewer1 and rowViewer2 spans provide option for viewing overflow rows + var tfoots = table.getElementsByTagName('TFOOT'); + var rowViewers = tfoots[0].getElementsByTagName('SPAN'); + if (row_count > visible_rows) { + rowViewers[0].innerHTML = visible_rows + " of"; + if (showFlag) { + rowViewers[0].style.display = 'none'; + rowViewers[1].innerHTML = 'View first 20'; + rowViewers[1].onclick = function() {viewTable(table, false)} + } + else { + rowViewers[0].style.display = ''; + rowViewers[1].innerHTML = 'View All'; + rowViewers[1].onclick = function() {viewTable(table, true)} + } + } + } + } + </script> + </head> + <body> + + <div style="float:right" id="buttonPrint" class="nonprintable"> + <button onclick="window.print()">Print</button> + </div> + + <blockquote class="sanitize_all_html_problem" class="nonprintable"> + + *********************************************************** + <p><b>Your Galaxy installation needs to be adjusted<br/> + to work with this plugin because HTML styles and<br/> + javascript are currently being omitted ("sanitized").</b></p> + + <p><b>Galaxy administrator: set sanitize_all_html=False in universe_wsgi.ini</b></p> + *********************************************************** + + </blockquote> +
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/templates/html_selectable_report.py Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,399 @@ +import os.path +import time +import csv +import collections +import re +import common + +HTML_REPORT_HEADER_FILE = 'html_report_header.html' + +class HTMLReport(object): + + """ This receives and sets up the general meta-data fields available to the html rendering engine + + """ + def __init__(self, tagGroup, options, query_stats = []): + + self.columns = tagGroup.columns + self.display_columns = [field for field in self.columns if field['group']=='column'] + self.row_limit = options.row_limit + self.section_bins = {} + self.todo = collections.deque([]) # stack of things to do + self.query_stats = query_stats + self.empty_queries = [query['id'] for query in query_stats if query['filtered_rows'] == 0] + self.initialized = False + + # These items are available for display in html generation via dictionary string replacement: [string ... %(filters)s ...] % self.lookup + self.lookup = { + 'depth': 0, + 'filters': 'Filters: ' + options.filters_HTML if len(options.filters_HTML) else '', + 'timestamp': time.strftime('%Y/%m/%d'), + 'visible_limit': 20, + 'column_count': str(len([field for field in self.columns if field['group']=='column'])), + 'table_rows':0, + 'select_row':0, + 'row_limit': self.row_limit, + 'label':'', + 'value':'', + 'link':'', + 'cssClass':'', + 'table_header': self._tableHeader(), + 'section_bins':'', + 'section_counter':1 + } + + if hasattr(options,'dataset_selection_id'): + self.lookup['dataset_selection_id'] = options.dataset_selection_id + self.initialized = True + + else: + self.lookup['dataset_selection_id'] = 0 + self.errorNotice = '<div style="width:400px;margin:auto"><h3>This Selectable HTML Report needs the "Basic Report Field Output" to include the qseq and sseq sequence fields (aligned part of query sequence and subject sequence). Add these fields or try a selection that has more than 12 columns.</h3></div>' + + """ + _processTagStack() + In the production of html, start tags and template bits are added to the outgoing html when + designated section columns of data change value. the self.todo stack keeps track of all the + tag closings that have to occur when a section or table section comes to an end (and new one + begins or end of document occurs). + + This dynamically executes any functions listed in stack that are greater than given tag depth. + Generally the functions return html closing content. + + @param depth integer >= 0 + @uses self.todo stack of [depth, function_name] items + """ + def _processTagStack(self, depth = 0): + html = '' + while len(self.todo) and self.todo[0][0] >= depth: + html += getattr(self, self.todo.popleft()[1] )() + return html + + + + ############################### HTML REPORT RENDERING ############################## + """ render() produces the html. Takes in tabular data + metainformation about that file, + and iterates through rows. This approach depends on detecting changes in stated report + section columns and table section columns, and triggers appropriate section start and end, + and table / table section start and end tags. + + @param in_file string Full file path + @param out_html_file string Full output html data file path to write to. + """ + def render (self, in_file, out_html_file): + + try: + + fp_in = open(in_file, "rb") + fp_out = open(out_html_file, 'w') + + fp_out.write( self._header(HTML_REPORT_HEADER_FILE) ) + + if self.initialized: + + fp_out.write( self._bodyStart() ) + self.todo.appendleft([0,'_bodyEnd']) + + reader = csv.reader(fp_in, delimiter="\t") + + for row in reader: + + html = '' + self.rowdata = [] + row_bins = [] + section_reset = False + + for (idx, field) in enumerate(self.columns): + + value = field['value'] = row[idx] + depth = idx + 1 + + # If a bin is mentioned on this row, its put into self.selection_bins. + if field['type'] == 'bin' and value != '': + row_bins.append(value) + if not value in self.section_bins: + self.section_bins[value] = field['label'] + + grouping = field['group'] + # Section or table grouping here: + if grouping == 'section' or grouping == 'table': + + # Check to see if a new section or table section is triggered by change in field's value: + if section_reset or (not 'valueOld' in field) or value != field['valueOld']: + + self.lookup['value'] = value + self.lookup['label'] = field['label'] + + html += self._processTagStack(depth) + + if grouping == 'section': + section_reset = True + self.lookup['section_depth'] = depth + self.lookup['section_counter'] += 1 + self.lookup['table_rows'] = 0 + self.section_bins = {} + + html += self._sectionStart() + + html += self._sectionFormStart() + self.todo.appendleft([depth,'_sectionFormEnd']) + + self.todo.appendleft([depth,'_sectionEnd']) + + elif grouping == 'table': + + lastToDo = self.todo[0] + if lastToDo[1] == '_sectionEnd': #Just started a section + html += self._tableStart() + self.todo.appendleft([lastToDo[0]+1,'_tableEnd']) + + html += self._tbodyHeader() + self._tbodyStart() + self.todo.appendleft([lastToDo[0]+2,'_tbodyEnd']) + + field['valueOld'] = value + + else: + + if grouping == 'column': self.rowdata.append(row[idx]) + + lastToDo = self.todo[0] + # No table level, instead going right from section to column field: + if lastToDo[1] == '_sectionEnd': + html += self._tableStart() + self._tbodyStart() + self.todo.appendleft([lastToDo[0]+1,'_tableEnd']) + self.todo.appendleft([lastToDo[0]+2,'_tbodyEnd']) + + self.lookup['row_bins'] = ",".join(row_bins) + + fp_out.write(html) + + self.lookup['table_rows'] += 1 + + # Now output table row of data: + fp_out.write( self._tableRow() ) + + + #Not initialized here, so just write created error notice. + else: + + fp_out.write('<h3>' + self.errorNotice + '</body></html>') + + fp_out.write( self._processTagStack() ) + + except IOError as e: + print 'Operation failed: %s' % e.strerror + + fp_in.close() + fp_out.close() + + + ############################### HTML REPORT PART TEMPLATES ############################## + def _header(self, filename): + + with open(os.path.join(os.path.dirname(__file__), filename), "r") as fphtml: + data = fphtml.read() + + return data + + + def _bodyStart(self): + # The form enables the creation of a dataset from selected entries. It passes selections (based on a certain column's value) to the "Select tabular rows" tool, which then creates a dataset from the selected rows. + with open(os.path.join(os.path.dirname(__file__), "html_selectable_report_tool_state.txt"), "r") as form_code_file: + self.lookup['form_state'] = form_code_file.readline().strip() + + html = """ + <script> + // Toggle checkbox inputs of given table according to state of checkbox + function toggleInputs(mycheckbox, table) { + var checkboxes = table.getElementsByTagName('INPUT'); + // Loop skips first toggler checkbox + for (var ptr = 1; ptr < checkboxes.length; ptr ++ ) { + checkboxes[ptr].checked = mycheckbox.checked; + } + return true; // prevents click processing + } + + //Drops hidden section id from form submission when no section items were selected + function formCheck() { + var tables = document.getElementsByTagName('TABLE'); + for (var ptr = 0; ptr < tables.length; ptr ++) { + var inputs = tables[ptr].getElementsByTagName('INPUT'); + var selected = 0; + // 1st item in table is select-all toggle + for (var ptr2 = 1; ptr2 < inputs.length; ptr2 ++) { + if (inputs[ptr2].getAttribute('name') == 'select' && inputs[ptr2].checked) selected ++; + } + if (selected==0) { + id = tables[ptr].getAttribute("id"); + secInput = document.getElementById(id + '_start'); + secInput.disabled = true; + secInput.setAttribute('disabled','disabled'); + secInput.value=''; + } + + } + return true; + } + </script> + + <form id="tool_form" name="tool_form" action="../../../tool_runner" target="galaxy_main" method="post" enctype="application/x-www-form-urlencoded"> + <input type="hidden" name="refresh" value="refresh"/> + <input type="hidden" name="tool_id" value="bccdcSelectSubsets"/> + <input type="hidden" name="tool_state" value="%(form_state)s"> + <input type="hidden" name="input" value="%(dataset_selection_id)s"/> + <input type="hidden" name="incl_excl" value="1"/> + """ % self.lookup + + if len(self.empty_queries): + qnames = '' + for name in self.empty_queries: qnames += '<li>' + name + '</li>\n' + html += """ + <div class="headerMessage">The following %s queries yielded 0 results (check filters): + <ul> + %s + </ul> + </div>""" % (len(self.empty_queries), qnames) + + return html % self.lookup + + # Repeated for each grouped section table display + def _sectionStart(self): + self.lookup['select_row'] +=1 + return """ + <div class="section section_depth%(section_depth)s"> + <div class="section_title">%(label)s: %(value)s</div> + """ % self.lookup + + + + def _sectionFormStart (self): + # This sets up the selection form with the minimal necessary parameters # + return """ + <input type="checkbox" name="select" value="%(select_row)s" id="secId_%(select_row)s_start" checked="checked" style="display:none"> + <input type="submit" class="btn btn-primary nonprintable" name="runtool_btn" value="Submit" onclick="formCheck()"> + """ % self.lookup + + + def _tableStart (self): + + return """ + <div class="checkUncheckAllPlaceholder"></div> + <table class="report" id="secId_%(select_row)s"> + %(table_header)s + """ % self.lookup + + + def _tableHeader(self): + + colTags = '' + thTags = '' + firstColumnFlag = True + # Style numeric fields + for field in self.columns: + if field['group'] == 'column': + colTags += ('<col />' if field['type'] == 'text' else '<col class="numeric" />') + if firstColumnFlag == True: + thTags += '''<th> + <input type="checkbox" class="sectionCheckbox nonprintable" value="1"/> + ''' + field['label'] + '</th>' + firstColumnFlag = False + else: + thTags += '<th>' + field['label'] + '</th>' + + return """ + <colgroup> + %s + </colgroup> + <thead class="top"> + <tr>%s</tr> + </thead>""" % (colTags, thTags) + + def _tbodyHeader (self): + if self.lookup['value'] == '': self.lookup['value'] = '(no match)' + return """ + <thead class="inside"> + <tr> + <th colspan="%(column_count)s">%(label)s: %(value)s</th> + </tr> + </thead>""" % self.lookup + + def _tbodyStart (self): + return """ + <tbody>""" % self.lookup + + + def _tableRow(self): + self.lookup['select_row'] +=1 + + tdTags = '' + for (col, field) in enumerate(self.display_columns): + value = self.rowdata[col] + self.lookup['value'] = value + self.lookup['cssClass'] = ' class="numeric"' if field['type'] == 'numeric' else '' + #See http://www.ncbi.nlm.nih.gov/books/NBK21091/table/ch18.T.refseq_accession_numbers_and_mole/?report=objectonly + #See http://www.ncbi.nlm.nih.gov/Sequin/acc.html + accessionID = re.search(r'[a-z]+[_]?[0-9]+(.[0-9]+)*' ,value, re.I) + if (accessionID) : + self.lookup['link'] = '<a href="https://google.com/#q=%s+gene" target="search">%s</a>' % (accessionID.group(), value) + else: + self.lookup['link'] = value + # First column optionally gets bin indicator as well as row checkbox selector + if (col == 0): + tdTags += '<td%(cssClass)s><input type="checkbox" name="select" value="%(select_row)s" />%(link)s<span class="super">%(row_bins)s</span></td>' % self.lookup + else: + tdTags += '<td%(cssClass)s>%(value)s</td>' % self.lookup + + return """\n\t\t\t<tr>%s</tr>""" % tdTags + + + def _tbodyEnd (self): + return """ + </tbody>""" + + def _tableEnd (self): + if len(self.section_bins): + bins = [] + for key in sorted(self.section_bins): + bins.append( '<span class="super">(%s)</span>%s' % (key, self.section_bins[key]) ) + self.lookup['section_bins'] = 'Bins: ' + ', '.join(bins) + else: + self.lookup['section_bins'] = '' + + return """ + <tfoot> + <tr> + <td colspan="%(column_count)s"> + <div class="footerCenter"> + %(filters)s. + </div> + <div class="footerLeft"> + <span class="rowViewer0"></span> %(table_rows)s results. + <span class="rowViewer1 nonprintable"></span> + %(section_bins)s + </div> + <div class="footerRight"> + Report produced on %(timestamp)s + </div> + + </td> + </tr> + </tfoot> + </table>""" % self.lookup + + def _sectionFormEnd (self): + return """ + + """ + + def _sectionEnd (self): + return """ + + </div>""" + + + def _bodyEnd (self): + + return """ + </form>\n\t</body>\n</html>""" + +
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/templates/html_selectable_report_tool_state.txt Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,1 @@ +386532663864313432623131656236333965653234346133623231333561303836643139623531663a37623232363936653730373537343232336132303232333433303331333932323263323032323566356637323635373237353665356637323635366436313730356636613666363235663639363435663566323233613230366537353663366332633230323236393665363336633566363537383633366332323361323032323563323233313563323232323263323032323733363536633635363337343232336132303232366537353663366332323263323032323566356637303631363736353566356632323361323033303764
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/blast_reporting_1.blastxml Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,3375 @@ +<?xml version="1.0"?> +<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> +<BlastOutput> + <BlastOutput_program>blastn</BlastOutput_program> + <BlastOutput_version>BLASTN 2.2.29+</BlastOutput_version> + <BlastOutput_reference>Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14.</BlastOutput_reference> + <BlastOutput_db>/projects2/ref_databases/NCBI/BLAST/LATEST/nt</BlastOutput_db> + <BlastOutput_query-ID>Query_1</BlastOutput_query-ID> + <BlastOutput_query-def>Assembly_67_BCC9_consensus_sequence_primers_removed</BlastOutput_query-def> + <BlastOutput_query-len>558</BlastOutput_query-len> + <BlastOutput_param> + <Parameters> + <Parameters_expect>0.001</Parameters_expect> + <Parameters_sc-match>1</Parameters_sc-match> + <Parameters_sc-mismatch>-2</Parameters_sc-mismatch> + <Parameters_gap-open>0</Parameters_gap-open> + <Parameters_gap-extend>0</Parameters_gap-extend> + <Parameters_filter>L;m;</Parameters_filter> + </Parameters> + </BlastOutput_param> +<BlastOutput_iterations> +<Iteration> + <Iteration_iter-num>1</Iteration_iter-num> + <Iteration_query-ID>Query_1</Iteration_query-ID> + <Iteration_query-def>Assembly_67_BCC9_consensus_sequence_primers_removed</Iteration_query-def> + <Iteration_query-len>558</Iteration_query-len> +<Iteration_hits> +<Hit> + <Hit_num>1</Hit_num> + <Hit_id>gi|158343837|gb|EU057669.1|</Hit_id> + <Hit_def>Burkholderia stabilis strain FCF41 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057669</Hit_accession> + <Hit_len>4804</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>774.866</Hsp_bit-score> + <Hsp_score>419</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>472</Hsp_query-to> + <Hsp_hit-from>2730</Hsp_hit-from> + <Hsp_hit-to>2289</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>442</Hsp_identity> + <Hsp_positive>442</Hsp_positive> + <Hsp_gaps>9</Hsp_gaps> + <Hsp_align-len>451</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGTCCT</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||| || ||||| |||||| || ||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>2</Hit_num> + <Hit_id>gi|158343647|gb|EU057649.1|</Hit_id> + <Hit_def>Burkholderia stabilis strain LMG14294 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057649</Hit_accession> + <Hit_len>4766</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>774.866</Hsp_bit-score> + <Hsp_score>419</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>472</Hsp_query-to> + <Hsp_hit-from>2730</Hsp_hit-from> + <Hsp_hit-to>2289</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>442</Hsp_identity> + <Hsp_positive>442</Hsp_positive> + <Hsp_gaps>9</Hsp_gaps> + <Hsp_align-len>451</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGTCCT</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||| || ||||| |||||| || ||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>3</Hit_num> + <Hit_id>gi|294195954|gb|GU183875.1|</Hit_id> + <Hit_def>Burkholderia stabilis strain FCF40 ProFAR isomerase (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU183875</Hit_accession> + <Hit_len>401</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>732.394</Hsp_bit-score> + <Hsp_score>396</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>424</Hsp_query-to> + <Hsp_hit-from>401</Hsp_hit-from> + <Hsp_hit-to>1</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>401</Hsp_identity> + <Hsp_positive>401</Hsp_positive> + <Hsp_gaps>2</Hsp_gaps> + <Hsp_align-len>403</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGC</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGC</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>4</Hit_num> + <Hit_id>gi|158343597|gb|EU057644.1|</Hit_id> + <Hit_def>Burkholderia pyrrocinia strain ATCC 15958 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057644</Hit_accession> + <Hit_len>4808</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>713.927</Hsp_bit-score> + <Hsp_score>386</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>472</Hsp_query-to> + <Hsp_hit-from>2730</Hsp_hit-from> + <Hsp_hit-to>2289</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>431</Hsp_identity> + <Hsp_positive>431</Hsp_positive> + <Hsp_gaps>9</Hsp_gaps> + <Hsp_align-len>451</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATATCCGTGTAGACGATCGACTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGGTCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGCAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| ||||||||||||| || ||||| |||||| || ||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>5</Hit_num> + <Hit_id>gi|293627938|gb|GU068980.1|</Hit_id> + <Hit_def>Burkholderia cepacia strain FCF2 1-(5-phosphoribosyl)-5-(5-phosphoribosylamino) methylideneamino (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU068980</Hit_accession> + <Hit_len>448</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>708.387</Hsp_bit-score> + <Hsp_score>383</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>472</Hsp_query-to> + <Hsp_hit-from>445</Hsp_hit-from> + <Hsp_hit-to>4</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>430</Hsp_identity> + <Hsp_positive>430</Hsp_positive> + <Hsp_gaps>9</Hsp_gaps> + <Hsp_align-len>451</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGACCACTTCGTGGCCCGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGTTGCCCGCGAACGCGGTACACGCGTCCTGCAGGAAACCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||| || ||||| |||||| || ||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>6</Hit_num> + <Hit_id>gi|293627936|gb|GU068979.1|</Hit_id> + <Hit_def>Burkholderia cepacia strain FCF1 1-(5-phosphoribosyl)-5-(5-phosphoribosylamino) methylideneamino (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU068979</Hit_accession> + <Hit_len>448</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>708.387</Hsp_bit-score> + <Hsp_score>383</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>472</Hsp_query-to> + <Hsp_hit-from>445</Hsp_hit-from> + <Hsp_hit-to>4</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>430</Hsp_identity> + <Hsp_positive>430</Hsp_positive> + <Hsp_gaps>9</Hsp_gaps> + <Hsp_align-len>451</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACAATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGACCACTTCGTGGCCCGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGTTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||| || ||||| |||||| || ||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>7</Hit_num> + <Hit_id>gi|158343777|gb|EU057663.1|</Hit_id> + <Hit_def>Burkholderia cepacia strain FCF2 histidinol-phosphate aminotransferase (hisC) gene, partial cds; and imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), phosphoribosyl-ATP pyrophosphohydrolase (hisE), and membrane protein genes, complete cds</Hit_def> + <Hit_accession>EU057663</Hit_accession> + <Hit_len>4810</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>708.387</Hsp_bit-score> + <Hsp_score>383</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>472</Hsp_query-to> + <Hsp_hit-from>2734</Hsp_hit-from> + <Hsp_hit-to>2293</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>430</Hsp_identity> + <Hsp_positive>430</Hsp_positive> + <Hsp_gaps>9</Hsp_gaps> + <Hsp_align-len>451</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGACCACTTCGTGGCCCGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGTTGCCCGCGAACGCGGTACACGCGTCCTGCAGGAAACCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||| || ||||| |||||| || ||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>8</Hit_num> + <Hit_id>gi|158343627|gb|EU057647.1|</Hit_id> + <Hit_def>Burkholderia cepacia strain LMG2161 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057647</Hit_accession> + <Hit_len>4811</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>708.387</Hsp_bit-score> + <Hsp_score>383</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>472</Hsp_query-to> + <Hsp_hit-from>2734</Hsp_hit-from> + <Hsp_hit-to>2293</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>430</Hsp_identity> + <Hsp_positive>430</Hsp_positive> + <Hsp_gaps>9</Hsp_gaps> + <Hsp_align-len>451</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGACCACTTCGTGGCCCGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGTTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAACCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCAACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||| |||||| || ||||| |||||| || ||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>9</Hit_num> + <Hit_id>gi|77965403|gb|CP000151.1|</Hit_id> + <Hit_def>Burkholderia sp. 383 chromosome 1, complete sequence</Hit_def> + <Hit_accession>CP000151</Hit_accession> + <Hit_len>3694126</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>708.387</Hsp_bit-score> + <Hsp_score>383</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>472</Hsp_query-to> + <Hsp_hit-from>394760</Hsp_hit-from> + <Hsp_hit-to>394319</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>430</Hsp_identity> + <Hsp_positive>430</Hsp_positive> + <Hsp_gaps>9</Hsp_gaps> + <Hsp_align-len>451</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCTGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACGAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||| ||||||||||||| || ||||| |||||| || ||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>10</Hit_num> + <Hit_id>gi|158343947|gb|EU057682.1|</Hit_id> + <Hit_def>Burkholderia pyrrocinia strain FCF44 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057682</Hit_accession> + <Hit_len>4804</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>702.847</Hsp_bit-score> + <Hsp_score>380</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>472</Hsp_query-to> + <Hsp_hit-from>2729</Hsp_hit-from> + <Hsp_hit-to>2288</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>429</Hsp_identity> + <Hsp_positive>429</Hsp_positive> + <Hsp_gaps>9</Hsp_gaps> + <Hsp_align-len>451</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGACTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCATCCAGCCCGACGATGATGTTGCCGGCGAACGCGGTGCATGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCA--TTTGCGGG-CCATCG-CC-GCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| |||||| || ||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>11</Hit_num> + <Hit_id>gi|158343937|gb|EU057680.1|</Hit_id> + <Hit_def>Burkholderia pyrrocinia strain FCF43 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057680</Hit_accession> + <Hit_len>4807</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>702.847</Hsp_bit-score> + <Hsp_score>380</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>472</Hsp_query-to> + <Hsp_hit-from>2729</Hsp_hit-from> + <Hsp_hit-to>2288</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>429</Hsp_identity> + <Hsp_positive>429</Hsp_positive> + <Hsp_gaps>9</Hsp_gaps> + <Hsp_align-len>451</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGACTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCATCCAGCCCGACGATGATGTTGCCGGCGAACGCGGTGCATGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCA--TTTGCGGG-CCATCG-CC-GCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| |||||| || ||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>12</Hit_num> + <Hit_id>gi|158343807|gb|EU057666.1|</Hit_id> + <Hit_def>Burkholderia pyrrocinia strain MVPC1/26 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057666</Hit_accession> + <Hit_len>4818</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>702.847</Hsp_bit-score> + <Hsp_score>380</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>472</Hsp_query-to> + <Hsp_hit-from>2740</Hsp_hit-from> + <Hsp_hit-to>2299</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>429</Hsp_identity> + <Hsp_positive>429</Hsp_positive> + <Hsp_gaps>9</Hsp_gaps> + <Hsp_align-len>451</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGACTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCATCCAGCCCGACGATGATGTTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCA--TTTGCGGG-CCATCG-CC-GCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| |||||| || ||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>13</Hit_num> + <Hit_id>gi|294196000|gb|GU183890.1|</Hit_id> + <Hit_def>Burkholderia stabilis strain LMG 18870 ProFAR isomerase (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU183890</Hit_accession> + <Hit_len>389</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>701.001</Hsp_bit-score> + <Hsp_score>379</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>48</Hsp_query-from> + <Hsp_query-to>440</Hsp_query-to> + <Hsp_hit-from>389</Hsp_hit-from> + <Hsp_hit-to>1</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>389</Hsp_identity> + <Hsp_positive>389</Hsp_positive> + <Hsp_gaps>4</Hsp_gaps> + <Hsp_align-len>393</Hsp_align-len> + <Hsp_qseq>CGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCC</Hsp_qseq> + <Hsp_hseq>CGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCGACCC</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>14</Hit_num> + <Hit_id>gi|402246008|gb|CP003774.1|</Hit_id> + <Hit_def>Burkholderia cepacia GG4 chromosome 1, complete sequence</Hit_def> + <Hit_accession>CP003774</Hit_accession> + <Hit_len>3463655</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>686.227</Hsp_bit-score> + <Hsp_score>371</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>469</Hsp_query-to> + <Hsp_hit-from>3371014</Hsp_hit-from> + <Hsp_hit-to>3371452</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>424</Hsp_identity> + <Hsp_positive>424</Hsp_positive> + <Hsp_gaps>9</Hsp_gaps> + <Hsp_align-len>448</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCATCGAGGCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGGTCCTTCACGGCCGCCGTACCGATGATCACGTAGGACAGGCCGGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGT</Hsp_hseq> + <Hsp_midline>||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||| || ||||| |||||| || |||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>15</Hit_num> + <Hit_id>gi|290767135|gb|GU187008.1|</Hit_id> + <Hit_def>Burkholderia lata strain LMG 6990 proFAR isomerase (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU187008</Hit_accession> + <Hit_len>416</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>686.227</Hsp_bit-score> + <Hsp_score>371</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>35</Hsp_query-from> + <Hsp_query-to>457</Hsp_query-to> + <Hsp_hit-from>416</Hsp_hit-from> + <Hsp_hit-to>1</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>407</Hsp_identity> + <Hsp_positive>407</Hsp_positive> + <Hsp_gaps>7</Hsp_gaps> + <Hsp_align-len>423</Hsp_align-len> + <Hsp_qseq>CGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATC</Hsp_qseq> + <Hsp_hseq>CGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCG-TTCAGGTCGACGAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATC</Hsp_hseq> + <Hsp_midline>|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||| ||||||||||||| || ||||| |||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>16</Hit_num> + <Hit_id>gi|158343927|gb|EU057679.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF16 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057679</Hit_accession> + <Hit_len>4803</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>675.147</Hsp_bit-score> + <Hsp_score>365</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>472</Hsp_query-to> + <Hsp_hit-from>2728</Hsp_hit-from> + <Hsp_hit-to>2287</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>424</Hsp_identity> + <Hsp_positive>424</Hsp_positive> + <Hsp_gaps>9</Hsp_gaps> + <Hsp_align-len>451</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAATCCTCGAACTTCTTCGCGAGATCGATCACCTCGTGACCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGAGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGGTTCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCGGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGGACGGGAATTTCGTCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACGAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||| ||||||||||||| || ||||| |||||| || ||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>17</Hit_num> + <Hit_id>gi|158343897|gb|EU057675.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF17 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057675</Hit_accession> + <Hit_len>4803</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>675.147</Hsp_bit-score> + <Hsp_score>365</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>472</Hsp_query-to> + <Hsp_hit-from>2728</Hsp_hit-from> + <Hsp_hit-to>2287</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>424</Hsp_identity> + <Hsp_positive>424</Hsp_positive> + <Hsp_gaps>9</Hsp_gaps> + <Hsp_align-len>451</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAATCCTCGAACTTCTTCGCGAGATCGATCACCTCGTGACCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGAGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGGTTCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCGGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGGACGGGAATTTCGTCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACGAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||| ||||||||||||| || ||||| |||||| || ||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>18</Hit_num> + <Hit_id>gi|158343757|gb|EU057661.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF14 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057661</Hit_accession> + <Hit_len>4803</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>675.147</Hsp_bit-score> + <Hsp_score>365</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>472</Hsp_query-to> + <Hsp_hit-from>2728</Hsp_hit-from> + <Hsp_hit-to>2287</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>424</Hsp_identity> + <Hsp_positive>424</Hsp_positive> + <Hsp_gaps>9</Hsp_gaps> + <Hsp_align-len>451</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAATCCTCGAACTTCTTCGCGAGATCGATCACCTCGTGACCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGAGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGGTTCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCGGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGGACGGGAATTTCGTCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACGAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||| ||||||||||||| || ||||| |||||| || ||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>19</Hit_num> + <Hit_id>gi|158343617|gb|EU057646.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF15 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057646</Hit_accession> + <Hit_len>4803</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>675.147</Hsp_bit-score> + <Hsp_score>365</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>22</Hsp_query-from> + <Hsp_query-to>472</Hsp_query-to> + <Hsp_hit-from>2728</Hsp_hit-from> + <Hsp_hit-to>2287</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>424</Hsp_identity> + <Hsp_positive>424</Hsp_positive> + <Hsp_gaps>9</Hsp_gaps> + <Hsp_align-len>451</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAATCCTCGAACTTCTTCGCGAGATCGATCACCTCGTGACCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGAGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGGTTCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCGGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGGACGGGAATTTCGTCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACGAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||| ||||||||||||| || ||||| |||||| || ||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>20</Hit_num> + <Hit_id>gi|290767133|gb|GU187007.1|</Hit_id> + <Hit_def>Burkholderia lata strain LMG 6860 proFAR isomerase (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU187007</Hit_accession> + <Hit_len>400</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>671.454</Hsp_bit-score> + <Hsp_score>363</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>35</Hsp_query-from> + <Hsp_query-to>438</Hsp_query-to> + <Hsp_hit-from>400</Hsp_hit-from> + <Hsp_hit-to>1</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>391</Hsp_identity> + <Hsp_positive>391</Hsp_positive> + <Hsp_gaps>4</Hsp_gaps> + <Hsp_align-len>404</Hsp_align-len> + <Hsp_qseq>CGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGAC</Hsp_qseq> + <Hsp_hseq>CGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCG-TTCAGGTCGACGAGATGGAGCCGCC-GGGCGCC--GAGATCGAC</Hsp_hseq> + <Hsp_midline>|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||||| |||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +</Iteration_hits> + <Iteration_stat> + <Statistics> + <Statistics_db-num>20069287</Statistics_db-num> + <Statistics_db-len>50671056400</Statistics_db-len> + <Statistics_hsp-len>33</Statistics_hsp-len> + <Statistics_eff-space>26254604212725</Statistics_eff-space> + <Statistics_kappa>0.46</Statistics_kappa> + <Statistics_lambda>1.28</Statistics_lambda> + <Statistics_entropy>0.85</Statistics_entropy> + </Statistics> + </Iteration_stat> +</Iteration> +<Iteration> + <Iteration_iter-num>2</Iteration_iter-num> + <Iteration_query-ID>Query_2</Iteration_query-ID> + <Iteration_query-def>Assembly_67_BCC8_consensus_sequence_primers_removed</Iteration_query-def> + <Iteration_query-len>787</Iteration_query-len> +<Iteration_hits> +<Hit> + <Hit_num>1</Hit_num> + <Hit_id>gi|158343827|gb|EU057668.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF20 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057668</Hit_accession> + <Hit_len>4804</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>811.799</Hsp_bit-score> + <Hsp_score>439</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>441</Hsp_identity> + <Hsp_positive>441</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>2</Hit_num> + <Hit_id>gi|290565700|gb|GU170811.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF26 ProFAR isomerase (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU170811</Hit_accession> + <Hit_len>448</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>806.26</Hsp_bit-score> + <Hsp_score>436</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>4</Hsp_hit-from> + <Hsp_hit-to>445</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>440</Hsp_identity> + <Hsp_positive>440</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>128</Hsp_hit-from> + <Hsp_hit-to>14</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>3</Hit_num> + <Hit_id>gi|158343957|gb|EU057683.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF27 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057683</Hit_accession> + <Hit_len>4803</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>806.26</Hsp_bit-score> + <Hsp_score>436</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>440</Hsp_identity> + <Hsp_positive>440</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>4</Hit_num> + <Hit_id>gi|158343867|gb|EU057672.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF30 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057672</Hit_accession> + <Hit_len>4803</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>806.26</Hsp_bit-score> + <Hsp_score>436</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>440</Hsp_identity> + <Hsp_positive>440</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>5</Hit_num> + <Hit_id>gi|158343767|gb|EU057662.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF24 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057662</Hit_accession> + <Hit_len>4804</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>806.26</Hsp_bit-score> + <Hsp_score>436</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>440</Hsp_identity> + <Hsp_positive>440</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>6</Hit_num> + <Hit_id>gi|290565702|gb|GU170812.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF21 ProFAR isomerase (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU170812</Hit_accession> + <Hit_len>448</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>800.72</Hsp_bit-score> + <Hsp_score>433</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>4</Hsp_hit-from> + <Hsp_hit-to>445</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>439</Hsp_identity> + <Hsp_positive>439</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>128</Hsp_hit-from> + <Hsp_hit-to>14</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>7</Hit_num> + <Hit_id>gi|158343977|gb|EU057685.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF28 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057685</Hit_accession> + <Hit_len>4803</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>800.72</Hsp_bit-score> + <Hsp_score>433</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>439</Hsp_identity> + <Hsp_positive>439</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>8</Hit_num> + <Hit_id>gi|158343847|gb|EU057670.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF22 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057670</Hit_accession> + <Hit_len>4803</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>800.72</Hsp_bit-score> + <Hsp_score>433</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>439</Hsp_identity> + <Hsp_positive>439</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>9</Hit_num> + <Hit_id>gi|158343817|gb|EU057667.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF19 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057667</Hit_accession> + <Hit_len>4803</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>800.72</Hsp_bit-score> + <Hsp_score>433</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>439</Hsp_identity> + <Hsp_positive>439</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>10</Hit_num> + <Hit_id>gi|158343787|gb|EU057664.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF25 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057664</Hit_accession> + <Hit_len>4803</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>800.72</Hsp_bit-score> + <Hsp_score>433</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>439</Hsp_identity> + <Hsp_positive>439</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>11</Hit_num> + <Hit_id>gi|116646113|gb|CP000458.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia HI2424 chromosome 1, complete sequence</Hit_def> + <Hit_accession>CP000458</Hit_accession> + <Hit_len>3483902</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>800.72</Hsp_bit-score> + <Hsp_score>433</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>479644</Hsp_hit-from> + <Hsp_hit-to>480085</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>439</Hsp_identity> + <Hsp_positive>439</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>479768</Hsp_hit-from> + <Hsp_hit-to>479654</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>12</Hit_num> + <Hit_id>gi|105891751|gb|CP000378.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence</Hit_def> + <Hit_accession>CP000378</Hit_accession> + <Hit_len>3294563</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>800.72</Hsp_bit-score> + <Hsp_score>433</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2947001</Hsp_hit-from> + <Hsp_hit-to>2946560</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>439</Hsp_identity> + <Hsp_positive>439</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2946877</Hsp_hit-from> + <Hsp_hit-to>2946991</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGC-TGCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>13</Hit_num> + <Hit_id>gi|158343927|gb|EU057679.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF16 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057679</Hit_accession> + <Hit_len>4803</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>795.18</Hsp_bit-score> + <Hsp_score>430</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>438</Hsp_identity> + <Hsp_positive>438</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>14</Hit_num> + <Hit_id>gi|158343897|gb|EU057675.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF17 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057675</Hit_accession> + <Hit_len>4803</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>795.18</Hsp_bit-score> + <Hsp_score>430</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>438</Hsp_identity> + <Hsp_positive>438</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>15</Hit_num> + <Hit_id>gi|158343857|gb|EU057671.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF23 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057671</Hit_accession> + <Hit_len>4797</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>795.18</Hsp_bit-score> + <Hsp_score>430</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>438</Hsp_identity> + <Hsp_positive>438</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTTGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>16</Hit_num> + <Hit_id>gi|158343757|gb|EU057661.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF14 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057661</Hit_accession> + <Hit_len>4803</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>795.18</Hsp_bit-score> + <Hsp_score>430</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>438</Hsp_identity> + <Hsp_positive>438</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>17</Hit_num> + <Hit_id>gi|158343617|gb|EU057646.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF15 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057646</Hit_accession> + <Hit_len>4803</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>795.18</Hsp_bit-score> + <Hsp_score>430</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>438</Hsp_identity> + <Hsp_positive>438</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>18</Hit_num> + <Hit_id>gi|290565698|gb|GU170810.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain LMG16656 ProFAR isomerase (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU170810</Hit_accession> + <Hit_len>448</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>789.64</Hsp_bit-score> + <Hsp_score>427</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>4</Hsp_hit-from> + <Hsp_hit-to>445</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>437</Hsp_identity> + <Hsp_positive>437</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCAGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>128</Hsp_hit-from> + <Hsp_hit-to>14</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>19</Hit_num> + <Hit_id>gi|158343877|gb|EU057673.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF31 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057673</Hit_accession> + <Hit_len>4802</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>789.64</Hsp_bit-score> + <Hsp_score>427</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2286</Hsp_hit-from> + <Hsp_hit-to>2727</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>437</Hsp_identity> + <Hsp_positive>437</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGTACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCATTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2410</Hsp_hit-from> + <Hsp_hit-to>2296</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>20</Hit_num> + <Hit_id>gi|190714214|emb|AM747720.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia J2315 chromosome 1, complete genome</Hit_def> + <Hit_accession>AM747720</Hit_accession> + <Hit_len>3870082</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>789.64</Hsp_bit-score> + <Hsp_score>427</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>348935</Hsp_hit-from> + <Hsp_hit-to>349376</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>437</Hsp_identity> + <Hsp_positive>437</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCAGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>349059</Hsp_hit-from> + <Hsp_hit-to>348945</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>21</Hit_num> + <Hit_id>gi|169814598|gb|CP000958.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence</Hit_def> + <Hit_accession>CP000958</Hit_accession> + <Hit_len>3532883</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>789.64</Hsp_bit-score> + <Hsp_score>427</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>447650</Hsp_hit-from> + <Hsp_hit-to>448091</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>437</Hsp_identity> + <Hsp_positive>437</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAACCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAATCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>163.625</Hsp_bit-score> + <Hsp_score>88</Hsp_score> + <Hsp_evalue>2.09047e-36</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>447774</Hsp_hit-from> + <Hsp_hit-to>447660</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>107</Hsp_identity> + <Hsp_positive>107</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGG-CTGCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGTTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>22</Hit_num> + <Hit_id>gi|158343967|gb|EU057684.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF13 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057684</Hit_accession> + <Hit_len>4803</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>784.1</Hsp_bit-score> + <Hsp_score>424</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>436</Hsp_identity> + <Hsp_positive>436</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCTTGCAGGACGCGTGCACCGCGTTCCCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>23</Hit_num> + <Hit_id>gi|158343917|gb|EU057678.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF32 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057678</Hit_accession> + <Hit_len>4802</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>756.4</Hsp_bit-score> + <Hsp_score>409</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>431</Hsp_identity> + <Hsp_positive>431</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTGCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCGGCCGTGAAGAATCCGGGCTTCCTGCAGGACGCATGCACCGCGTTCTCGGGCAACATCATCGTCGGGCTGGATGCGAAGGACGGCAAGGTCGCGACCGATGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| || |||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>24</Hit_num> + <Hit_id>gi|158343907|gb|EU057677.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF39 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057677</Hit_accession> + <Hit_len>4802</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>756.4</Hsp_bit-score> + <Hsp_score>409</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>431</Hsp_identity> + <Hsp_positive>431</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTGCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCGGCCGTGAAGAATCCGGGCTTCCTGCAGGACGCATGCACCGCGTTCTCGGGCAACATCATCGTCGGGCTGGATGCGAAGGACGGCAAGGTCGCGACCGATGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| || |||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>25</Hit_num> + <Hit_id>gi|158343887|gb|EU057674.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF38 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057674</Hit_accession> + <Hit_len>4787</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>756.4</Hsp_bit-score> + <Hsp_score>409</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>571</Hsp_query-to> + <Hsp_hit-from>2287</Hsp_hit-from> + <Hsp_hit-to>2728</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>431</Hsp_identity> + <Hsp_positive>431</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTGCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCGGCCGTGAAGAATCCGGGCTTCCTGCAGGACGCATGCACCGCGTTCTCGGGCAACATCATCGTCGGGCTGGATGCGAAGGACGGCAAGGTCGCGACCGATGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| || |||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>169.165</Hsp_bit-score> + <Hsp_score>91</Hsp_score> + <Hsp_evalue>4.49318e-38</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>109</Hsp_query-to> + <Hsp_hit-from>2411</Hsp_hit-from> + <Hsp_hit-to>2297</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>108</Hsp_positive> + <Hsp_gaps>6</Hsp_gaps> + <Hsp_align-len>115</Hsp_align-len> + <Hsp_qseq>GTCGACGATCGCTTCGATCGCCTCGAGATTCTTCGGCT-GCCGGCGAATGCGCCGTTCAGGTCGACGAGA-GGAGCCGCCGGGCGCCGAGATC-ACCCACT-GCG--CCATCGCC</Hsp_qseq> + <Hsp_hseq>GTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCC</Hsp_hseq> + <Hsp_midline>||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +</Iteration_hits> + <Iteration_stat> + <Statistics> + <Statistics_db-num>20069287</Statistics_db-num> + <Statistics_db-len>50671056400</Statistics_db-len> + <Statistics_hsp-len>33</Statistics_hsp-len> + <Statistics_eff-space>37706612526466</Statistics_eff-space> + <Statistics_kappa>0.46</Statistics_kappa> + <Statistics_lambda>1.28</Statistics_lambda> + <Statistics_entropy>0.85</Statistics_entropy> + </Statistics> + </Iteration_stat> +</Iteration> +<Iteration> + <Iteration_iter-num>3</Iteration_iter-num> + <Iteration_query-ID>Query_3</Iteration_query-ID> + <Iteration_query-def>Assembly_67_BCC6_consensus_sequence_primers_removed</Iteration_query-def> + <Iteration_query-len>557</Iteration_query-len> +<Iteration_hits> +<Hit> + <Hit_num>1</Hit_num> + <Hit_id>gi|77965403|gb|CP000151.1|</Hit_id> + <Hit_def>Burkholderia sp. 383 chromosome 1, complete sequence</Hit_def> + <Hit_accession>CP000151</Hit_accession> + <Hit_len>3694126</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>773.02</Hsp_bit-score> + <Hsp_score>418</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>449</Hsp_query-to> + <Hsp_hit-from>394760</Hsp_hit-from> + <Hsp_hit-to>394319</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>434</Hsp_identity> + <Hsp_positive>434</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCTGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>2</Hit_num> + <Hit_id>gi|158343807|gb|EU057666.1|</Hit_id> + <Hit_def>Burkholderia pyrrocinia strain MVPC1/26 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057666</Hit_accession> + <Hit_len>4818</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>761.94</Hsp_bit-score> + <Hsp_score>412</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>449</Hsp_query-to> + <Hsp_hit-from>2740</Hsp_hit-from> + <Hsp_hit-to>2299</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>432</Hsp_identity> + <Hsp_positive>432</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGACTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCATCCAGCCCGACGATGATGTTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCATTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>3</Hit_num> + <Hit_id>gi|293627936|gb|GU068979.1|</Hit_id> + <Hit_def>Burkholderia cepacia strain FCF1 1-(5-phosphoribosyl)-5-(5-phosphoribosylamino) methylideneamino (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU068979</Hit_accession> + <Hit_len>448</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>750.86</Hsp_bit-score> + <Hsp_score>406</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>449</Hsp_query-to> + <Hsp_hit-from>445</Hsp_hit-from> + <Hsp_hit-to>4</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>430</Hsp_identity> + <Hsp_positive>430</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACAATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGACCACTTCGTGGCCCGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGTTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>4</Hit_num> + <Hit_id>gi|158343947|gb|EU057682.1|</Hit_id> + <Hit_def>Burkholderia pyrrocinia strain FCF44 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057682</Hit_accession> + <Hit_len>4804</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>750.86</Hsp_bit-score> + <Hsp_score>406</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>449</Hsp_query-to> + <Hsp_hit-from>2729</Hsp_hit-from> + <Hsp_hit-to>2288</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>430</Hsp_identity> + <Hsp_positive>430</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGACTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCATCCAGCCCGACGATGATGTTGCCGGCGAACGCGGTGCATGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCATTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>5</Hit_num> + <Hit_id>gi|158343937|gb|EU057680.1|</Hit_id> + <Hit_def>Burkholderia pyrrocinia strain FCF43 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057680</Hit_accession> + <Hit_len>4807</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>750.86</Hsp_bit-score> + <Hsp_score>406</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>449</Hsp_query-to> + <Hsp_hit-from>2729</Hsp_hit-from> + <Hsp_hit-to>2288</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>430</Hsp_identity> + <Hsp_positive>430</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGACTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCATCCAGCCCGACGATGATGTTGCCGGCGAACGCGGTGCATGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCATTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>6</Hit_num> + <Hit_id>gi|158343597|gb|EU057644.1|</Hit_id> + <Hit_def>Burkholderia pyrrocinia strain ATCC 15958 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057644</Hit_accession> + <Hit_len>4808</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>745.32</Hsp_bit-score> + <Hsp_score>403</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>449</Hsp_query-to> + <Hsp_hit-from>2730</Hsp_hit-from> + <Hsp_hit-to>2289</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>429</Hsp_identity> + <Hsp_positive>429</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATATCCGTGTAGACGATCGACTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGGTCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACCAGATGCAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>7</Hit_num> + <Hit_id>gi|402246008|gb|CP003774.1|</Hit_id> + <Hit_def>Burkholderia cepacia GG4 chromosome 1, complete sequence</Hit_def> + <Hit_accession>CP003774</Hit_accession> + <Hit_len>3463655</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>739.78</Hsp_bit-score> + <Hsp_score>400</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>446</Hsp_query-to> + <Hsp_hit-from>3371014</Hsp_hit-from> + <Hsp_hit-to>3371452</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>426</Hsp_identity> + <Hsp_positive>426</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>439</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCATCGAGGCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGGTCCTTCACGGCCGCCGTACCGATGATCACGTAGGACAGGCCGGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGT</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>8</Hit_num> + <Hit_id>gi|293627938|gb|GU068980.1|</Hit_id> + <Hit_def>Burkholderia cepacia strain FCF2 1-(5-phosphoribosyl)-5-(5-phosphoribosylamino) methylideneamino (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU068980</Hit_accession> + <Hit_len>448</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>739.78</Hsp_bit-score> + <Hsp_score>400</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>449</Hsp_query-to> + <Hsp_hit-from>445</Hsp_hit-from> + <Hsp_hit-to>4</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>428</Hsp_identity> + <Hsp_positive>428</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGACCACTTCGTGGCCCGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGTTGCCCGCGAACGCGGTACACGCGTCCTGCAGGAAACCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>9</Hit_num> + <Hit_id>gi|158343777|gb|EU057663.1|</Hit_id> + <Hit_def>Burkholderia cepacia strain FCF2 histidinol-phosphate aminotransferase (hisC) gene, partial cds; and imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), phosphoribosyl-ATP pyrophosphohydrolase (hisE), and membrane protein genes, complete cds</Hit_def> + <Hit_accession>EU057663</Hit_accession> + <Hit_len>4810</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>739.78</Hsp_bit-score> + <Hsp_score>400</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>449</Hsp_query-to> + <Hsp_hit-from>2734</Hsp_hit-from> + <Hsp_hit-to>2293</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>428</Hsp_identity> + <Hsp_positive>428</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGACCACTTCGTGGCCCGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGTTGCCCGCGAACGCGGTACACGCGTCCTGCAGGAAACCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>10</Hit_num> + <Hit_id>gi|158343627|gb|EU057647.1|</Hit_id> + <Hit_def>Burkholderia cepacia strain LMG2161 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057647</Hit_accession> + <Hit_len>4811</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>739.78</Hsp_bit-score> + <Hsp_score>400</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>449</Hsp_query-to> + <Hsp_hit-from>2734</Hsp_hit-from> + <Hsp_hit-to>2293</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>428</Hsp_identity> + <Hsp_positive>428</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGACCACTTCGTGGCCCGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGTTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAACCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCAACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>11</Hit_num> + <Hit_id>gi|290767135|gb|GU187008.1|</Hit_id> + <Hit_def>Burkholderia lata strain LMG 6990 proFAR isomerase (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU187008</Hit_accession> + <Hit_len>416</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>730.547</Hsp_bit-score> + <Hsp_score>395</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>21</Hsp_query-from> + <Hsp_query-to>436</Hsp_query-to> + <Hsp_hit-from>416</Hsp_hit-from> + <Hsp_hit-to>1</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>409</Hsp_identity> + <Hsp_positive>409</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>416</Hsp_align-len> + <Hsp_qseq>CGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATC</Hsp_qseq> + <Hsp_hseq>CGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATC</Hsp_hseq> + <Hsp_midline>|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>12</Hit_num> + <Hit_id>gi|158343837|gb|EU057669.1|</Hit_id> + <Hit_def>Burkholderia stabilis strain FCF41 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057669</Hit_accession> + <Hit_len>4804</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>728.7</Hsp_bit-score> + <Hsp_score>394</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>449</Hsp_query-to> + <Hsp_hit-from>2730</Hsp_hit-from> + <Hsp_hit-to>2289</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>426</Hsp_identity> + <Hsp_positive>426</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>13</Hit_num> + <Hit_id>gi|158343647|gb|EU057649.1|</Hit_id> + <Hit_def>Burkholderia stabilis strain LMG14294 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057649</Hit_accession> + <Hit_len>4766</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>728.7</Hsp_bit-score> + <Hsp_score>394</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>449</Hsp_query-to> + <Hsp_hit-from>2730</Hsp_hit-from> + <Hsp_hit-to>2289</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>426</Hsp_identity> + <Hsp_positive>426</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>14</Hit_num> + <Hit_id>gi|169814598|gb|CP000958.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence</Hit_def> + <Hit_accession>CP000958</Hit_accession> + <Hit_len>3532883</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>728.7</Hsp_bit-score> + <Hsp_score>394</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>449</Hsp_query-to> + <Hsp_hit-from>448091</Hsp_hit-from> + <Hsp_hit-to>447650</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>426</Hsp_identity> + <Hsp_positive>426</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACCTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGAAAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATTCTTCACGGCGGCGGTGCCGATGATCACGTAGGACAGGCCGGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGGACGGGAATTTCGTCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGTTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>15</Hit_num> + <Hit_id>gi|290767131|gb|GU187006.1|</Hit_id> + <Hit_def>Burkholderia lata strain LMG 6991 proFAR isomerase (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU187006</Hit_accession> + <Hit_len>416</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>725.007</Hsp_bit-score> + <Hsp_score>392</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>21</Hsp_query-from> + <Hsp_query-to>436</Hsp_query-to> + <Hsp_hit-from>416</Hsp_hit-from> + <Hsp_hit-to>1</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>408</Hsp_identity> + <Hsp_positive>408</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>416</Hsp_align-len> + <Hsp_qseq>CGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATC</Hsp_qseq> + <Hsp_hseq>CGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCTGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATC</Hsp_hseq> + <Hsp_midline>|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>16</Hit_num> + <Hit_id>gi|290565700|gb|GU170811.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF26 ProFAR isomerase (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU170811</Hit_accession> + <Hit_len>448</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>723.16</Hsp_bit-score> + <Hsp_score>391</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>449</Hsp_query-to> + <Hsp_hit-from>445</Hsp_hit-from> + <Hsp_hit-to>4</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>425</Hsp_identity> + <Hsp_positive>425</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCGGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACCTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGAAAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGGTTCTTCACGGCGGCGGTGCCGATGATCACGTAGGACAGGCCGGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGGACGGGAATTTCGTCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>17</Hit_num> + <Hit_id>gi|158343957|gb|EU057683.1|</Hit_id> + <Hit_def>Burkholderia cenocepacia strain FCF27 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057683</Hit_accession> + <Hit_len>4803</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>723.16</Hsp_bit-score> + <Hsp_score>391</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>8</Hsp_query-from> + <Hsp_query-to>449</Hsp_query-to> + <Hsp_hit-from>2728</Hsp_hit-from> + <Hsp_hit-to>2287</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>425</Hsp_identity> + <Hsp_positive>425</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_qseq> + <Hsp_hseq>TGCAGCATCCCGTCGCGGCCGATGTCGGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACCTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGAAAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGGTTCTTCACGGCGGCGGTGCCGATGATCACGTAGGACAGGCCGGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGGACGGGAATTTCGTCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT</Hsp_hseq> + <Hsp_midline>||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +</Iteration_hits> + <Iteration_stat> + <Statistics> + <Statistics_db-num>20069287</Statistics_db-num> + <Statistics_db-len>50671056400</Statistics_db-len> + <Statistics_hsp-len>33</Statistics_hsp-len> + <Statistics_eff-space>26204595442796</Statistics_eff-space> + <Statistics_kappa>0.46</Statistics_kappa> + <Statistics_lambda>1.28</Statistics_lambda> + <Statistics_entropy>0.85</Statistics_entropy> + </Statistics> + </Iteration_stat> +</Iteration> +<Iteration> + <Iteration_iter-num>4</Iteration_iter-num> + <Iteration_query-ID>Query_4</Iteration_query-ID> + <Iteration_query-def>Assembly_67_BCC2_consensus_sequence_primers_removed</Iteration_query-def> + <Iteration_query-len>719</Iteration_query-len> +<Iteration_hits> +<Hit> + <Hit_num>1</Hit_num> + <Hit_id>gi|158343987|gb|EU057686.1|</Hit_id> + <Hit_def>Burkholderia multivorans strain FCF7 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057686</Hit_accession> + <Hit_len>4829</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>811.799</Hsp_bit-score> + <Hsp_score>439</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>103</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>2289</Hsp_hit-from> + <Hsp_hit-to>2730</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>441</Hsp_identity> + <Hsp_positive>441</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>213.485</Hsp_bit-score> + <Hsp_score>115</Hsp_score> + <Hsp_evalue>1.862e-51</Hsp_evalue> + <Hsp_query-from>571</Hsp_query-from> + <Hsp_query-to>714</Hsp_query-to> + <Hsp_hit-from>2310</Hsp_hit-from> + <Hsp_hit-to>2456</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>138</Hsp_identity> + <Hsp_positive>138</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>148</Hsp_align-len> + <Hsp_qseq>GCAAGTGGGTCGATCTCGGCG-CCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTTCGCCGGCAAGCCGAACAATCTCGATGAGATTGAAGCGAT-CTCGACGAATTCGGCGATGAGATCCCGGTGCAGCTCGGCG-CGGC-TTC</Hsp_qseq> + <Hsp_hseq>GCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCG-TTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTC</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||| ||||||||| |||||||||| ||||||||||||||||||| |||| |||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>130.386</Hsp_bit-score> + <Hsp_score>70</Hsp_score> + <Hsp_evalue>1.92905e-26</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>86</Hsp_query-to> + <Hsp_hit-from>2382</Hsp_hit-from> + <Hsp_hit-to>2292</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>85</Hsp_identity> + <Hsp_positive>85</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>91</Hsp_align-len> + <Hsp_qseq>TTCGGC-TGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATC-ACCCACTTGCG--CCATCGCC-CAGGGT</Hsp_qseq> + <Hsp_hseq>TTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGT</Hsp_hseq> + <Hsp_midline>|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>2</Hit_num> + <Hit_id>gi|158343677|gb|EU057652.1|</Hit_id> + <Hit_def>Burkholderia multivorans strain LMG18822 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057652</Hit_accession> + <Hit_len>4825</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>806.26</Hsp_bit-score> + <Hsp_score>436</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>103</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>2285</Hsp_hit-from> + <Hsp_hit-to>2726</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>440</Hsp_identity> + <Hsp_positive>440</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTTGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>213.485</Hsp_bit-score> + <Hsp_score>115</Hsp_score> + <Hsp_evalue>1.862e-51</Hsp_evalue> + <Hsp_query-from>571</Hsp_query-from> + <Hsp_query-to>714</Hsp_query-to> + <Hsp_hit-from>2306</Hsp_hit-from> + <Hsp_hit-to>2452</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>138</Hsp_identity> + <Hsp_positive>138</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>148</Hsp_align-len> + <Hsp_qseq>GCAAGTGGGTCGATCTCGGCG-CCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTTCGCCGGCAAGCCGAACAATCTCGATGAGATTGAAGCGAT-CTCGACGAATTCGGCGATGAGATCCCGGTGCAGCTCGGCG-CGGC-TTC</Hsp_qseq> + <Hsp_hseq>GCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCG-TTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTC</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||| ||||||||| |||||||||| ||||||||||||||||||| |||| |||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>130.386</Hsp_bit-score> + <Hsp_score>70</Hsp_score> + <Hsp_evalue>1.92905e-26</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>86</Hsp_query-to> + <Hsp_hit-from>2378</Hsp_hit-from> + <Hsp_hit-to>2288</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>85</Hsp_identity> + <Hsp_positive>85</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>91</Hsp_align-len> + <Hsp_qseq>TTCGGC-TGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATC-ACCCACTTGCG--CCATCGCC-CAGGGT</Hsp_qseq> + <Hsp_hseq>TTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGT</Hsp_hseq> + <Hsp_midline>|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>3</Hit_num> + <Hit_id>gi|158343667|gb|EU057651.1|</Hit_id> + <Hit_def>Burkholderia multivorans strain LMG17588 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057651</Hit_accession> + <Hit_len>4829</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>806.26</Hsp_bit-score> + <Hsp_score>436</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>103</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>2289</Hsp_hit-from> + <Hsp_hit-to>2730</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>440</Hsp_identity> + <Hsp_positive>440</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>213.485</Hsp_bit-score> + <Hsp_score>115</Hsp_score> + <Hsp_evalue>1.862e-51</Hsp_evalue> + <Hsp_query-from>571</Hsp_query-from> + <Hsp_query-to>714</Hsp_query-to> + <Hsp_hit-from>2310</Hsp_hit-from> + <Hsp_hit-to>2456</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>138</Hsp_identity> + <Hsp_positive>138</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>148</Hsp_align-len> + <Hsp_qseq>GCAAGTGGGTCGATCTCGGCG-CCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTTCGCCGGCAAGCCGAACAATCTCGATGAGATTGAAGCGAT-CTCGACGAATTCGGCGATGAGATCCCGGTGCAGCTCGGCG-CGGC-TTC</Hsp_qseq> + <Hsp_hseq>GCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCG-TTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTC</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||| ||||||||| |||||||||| ||||||||||||||||||| |||| |||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>130.386</Hsp_bit-score> + <Hsp_score>70</Hsp_score> + <Hsp_evalue>1.92905e-26</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>86</Hsp_query-to> + <Hsp_hit-from>2382</Hsp_hit-from> + <Hsp_hit-to>2292</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>85</Hsp_identity> + <Hsp_positive>85</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>91</Hsp_align-len> + <Hsp_qseq>TTCGGC-TGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATC-ACCCACTTGCG--CCATCGCC-CAGGGT</Hsp_qseq> + <Hsp_hseq>TTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGT</Hsp_hseq> + <Hsp_midline>|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>4</Hit_num> + <Hit_id>gi|189332915|dbj|AP009385.1|</Hit_id> + <Hit_def>Burkholderia multivorans ATCC 17616 DNA, complete genome, chromosome 1</Hit_def> + <Hit_accession>AP009385</Hit_accession> + <Hit_len>3448421</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>806.26</Hsp_bit-score> + <Hsp_score>436</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>103</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>3160621</Hsp_hit-from> + <Hsp_hit-to>3160180</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>440</Hsp_identity> + <Hsp_positive>440</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>213.485</Hsp_bit-score> + <Hsp_score>115</Hsp_score> + <Hsp_evalue>1.862e-51</Hsp_evalue> + <Hsp_query-from>571</Hsp_query-from> + <Hsp_query-to>714</Hsp_query-to> + <Hsp_hit-from>3160600</Hsp_hit-from> + <Hsp_hit-to>3160454</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>138</Hsp_identity> + <Hsp_positive>138</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>148</Hsp_align-len> + <Hsp_qseq>GCAAGTGGGTCGATCTCGGCGCC-GGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTTCGCCGGCAAGCCGAACAATCTCGATGAGATTGAAGCGATC-TCGACGAATTCGGCGATGAGATCCCGGTGCAGCTCGGCG-CGGC-TTC</Hsp_qseq> + <Hsp_hseq>GCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTT-CGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTC</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||| |||||||| |||||||||| ||||||||||||||||||| |||| |||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>130.386</Hsp_bit-score> + <Hsp_score>70</Hsp_score> + <Hsp_evalue>1.92905e-26</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>86</Hsp_query-to> + <Hsp_hit-from>3160528</Hsp_hit-from> + <Hsp_hit-to>3160618</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>85</Hsp_identity> + <Hsp_positive>85</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>91</Hsp_align-len> + <Hsp_qseq>TTCGGC-TGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATC-ACCCACTTGCG--CCATCGCC-CAGGGT</Hsp_qseq> + <Hsp_hseq>TTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGT</Hsp_hseq> + <Hsp_midline>|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>5</Hit_num> + <Hit_id>gi|160340609|gb|CP000868.1|</Hit_id> + <Hit_def>Burkholderia multivorans ATCC 17616 chromosome 1, complete sequence</Hit_def> + <Hit_accession>CP000868</Hit_accession> + <Hit_len>3448466</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>806.26</Hsp_bit-score> + <Hsp_score>436</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>103</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>364152</Hsp_hit-from> + <Hsp_hit-to>364593</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>440</Hsp_identity> + <Hsp_positive>440</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>213.485</Hsp_bit-score> + <Hsp_score>115</Hsp_score> + <Hsp_evalue>1.862e-51</Hsp_evalue> + <Hsp_query-from>571</Hsp_query-from> + <Hsp_query-to>714</Hsp_query-to> + <Hsp_hit-from>364173</Hsp_hit-from> + <Hsp_hit-to>364319</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>138</Hsp_identity> + <Hsp_positive>138</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>148</Hsp_align-len> + <Hsp_qseq>GCAAGTGGGTCGATCTCGGCG-CCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTTCGCCGGCAAGCCGAACAATCTCGATGAGATTGAAGCGAT-CTCGACGAATTCGGCGATGAGATCCCGGTGCAGCTCGGCG-CGGC-TTC</Hsp_qseq> + <Hsp_hseq>GCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCG-TTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTC</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||| ||||||||| |||||||||| ||||||||||||||||||| |||| |||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>130.386</Hsp_bit-score> + <Hsp_score>70</Hsp_score> + <Hsp_evalue>1.92905e-26</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>86</Hsp_query-to> + <Hsp_hit-from>364245</Hsp_hit-from> + <Hsp_hit-to>364155</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>85</Hsp_identity> + <Hsp_positive>85</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>91</Hsp_align-len> + <Hsp_qseq>TTCGGC-TGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATC-ACCCACTTGCG--CCATCGCC-CAGGGT</Hsp_qseq> + <Hsp_hseq>TTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGT</Hsp_hseq> + <Hsp_midline>|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>6</Hit_num> + <Hit_id>gi|28971668|dbj|AB091436.1|</Hit_id> + <Hit_def>Burkholderia multivorans genes for UDP-N-glucosamine 1-carboxyvinyltransferase, ATP phosphoribosyl transferase, histidinol dehydrogenase, histidinol-phosphate aminotransferase, imidazoleglycerol-phosphate dehydratase, probable transmembrane proteins, glutamine amidotransferase, phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, imidazole glycerol phosphate synthase, phosphoribosyl-AMP cyclohydrolase, phosphoribosyl-ATP pyrophosphatase, partial and complete cds</Hit_def> + <Hit_accession>AB091436</Hit_accession> + <Hit_len>8467</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>806.26</Hsp_bit-score> + <Hsp_score>436</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>103</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>5598</Hsp_hit-from> + <Hsp_hit-to>6039</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>440</Hsp_identity> + <Hsp_positive>440</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>213.485</Hsp_bit-score> + <Hsp_score>115</Hsp_score> + <Hsp_evalue>1.862e-51</Hsp_evalue> + <Hsp_query-from>571</Hsp_query-from> + <Hsp_query-to>714</Hsp_query-to> + <Hsp_hit-from>5619</Hsp_hit-from> + <Hsp_hit-to>5765</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>138</Hsp_identity> + <Hsp_positive>138</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>148</Hsp_align-len> + <Hsp_qseq>GCAAGTGGGTCGATCTCGGCG-CCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTTCGCCGGCAAGCCGAACAATCTCGATGAGATTGAAGCGAT-CTCGACGAATTCGGCGATGAGATCCCGGTGCAGCTCGGCG-CGGC-TTC</Hsp_qseq> + <Hsp_hseq>GCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCG-TTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTC</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||| ||||||||| |||||||||| ||||||||||||||||||| |||| |||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>130.386</Hsp_bit-score> + <Hsp_score>70</Hsp_score> + <Hsp_evalue>1.92905e-26</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>86</Hsp_query-to> + <Hsp_hit-from>5691</Hsp_hit-from> + <Hsp_hit-to>5601</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>85</Hsp_identity> + <Hsp_positive>85</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>91</Hsp_align-len> + <Hsp_qseq>TTCGGC-TGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATC-ACCCACTTGCG--CCATCGCC-CAGGGT</Hsp_qseq> + <Hsp_hseq>TTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGT</Hsp_hseq> + <Hsp_midline>|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>7</Hit_num> + <Hit_id>gi|290792748|gb|GU178771.1|</Hit_id> + <Hit_def>Burkholderia multivorans strain FCF 10 proFAR isomerase (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU178771</Hit_accession> + <Hit_len>448</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>800.72</Hsp_bit-score> + <Hsp_score>433</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>103</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>4</Hsp_hit-from> + <Hsp_hit-to>445</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>439</Hsp_identity> + <Hsp_positive>439</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTTGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAAGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>213.485</Hsp_bit-score> + <Hsp_score>115</Hsp_score> + <Hsp_evalue>1.862e-51</Hsp_evalue> + <Hsp_query-from>571</Hsp_query-from> + <Hsp_query-to>714</Hsp_query-to> + <Hsp_hit-from>25</Hsp_hit-from> + <Hsp_hit-to>171</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>138</Hsp_identity> + <Hsp_positive>138</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>148</Hsp_align-len> + <Hsp_qseq>GCAAGTGGGTCGATCTCGGCG-CCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTTCGCCGGCAAGCCGAACAATCTCGATGAGATTGAAGCGAT-CTCGACGAATTCGGCGATGAGATCCCGGTGCAGCTCGGCG-CGGC-TTC</Hsp_qseq> + <Hsp_hseq>GCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCG-TTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTC</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||| ||||||||| |||||||||| ||||||||||||||||||| |||| |||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>130.386</Hsp_bit-score> + <Hsp_score>70</Hsp_score> + <Hsp_evalue>1.92905e-26</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>86</Hsp_query-to> + <Hsp_hit-from>97</Hsp_hit-from> + <Hsp_hit-to>7</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>85</Hsp_identity> + <Hsp_positive>85</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>91</Hsp_align-len> + <Hsp_qseq>TTCGGC-TGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATC-ACCCACTTGCG--CCATCGCC-CAGGGT</Hsp_qseq> + <Hsp_hseq>TTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGT</Hsp_hseq> + <Hsp_midline>|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>8</Hit_num> + <Hit_id>gi|158343637|gb|EU057648.1|</Hit_id> + <Hit_def>Burkholderia multivorans strain LMG13010 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057648</Hit_accession> + <Hit_len>4829</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>800.72</Hsp_bit-score> + <Hsp_score>433</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>103</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>2289</Hsp_hit-from> + <Hsp_hit-to>2730</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>439</Hsp_identity> + <Hsp_positive>439</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGACCCGGGCTTTCTGCGCGACGCATGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>207.945</Hsp_bit-score> + <Hsp_score>112</Hsp_score> + <Hsp_evalue>8.66306e-50</Hsp_evalue> + <Hsp_query-from>571</Hsp_query-from> + <Hsp_query-to>714</Hsp_query-to> + <Hsp_hit-from>2310</Hsp_hit-from> + <Hsp_hit-to>2456</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>137</Hsp_identity> + <Hsp_positive>137</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>148</Hsp_align-len> + <Hsp_qseq>GCAAGTGGGTCGATCTCGGCG-CCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTTCGCCGGCAAGCCGAACAATCTCGATGAGATTGAAGCGAT-CTCGACGAATTCGGCGATGAGATCCCGGTGCAGCTCGGCG-CGGC-TTC</Hsp_qseq> + <Hsp_hseq>GCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCA-TTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTC</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||| ||||||||| |||||||||| ||||||||||||||||||| |||| |||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>124.846</Hsp_bit-score> + <Hsp_score>67</Hsp_score> + <Hsp_evalue>8.97498e-25</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>86</Hsp_query-to> + <Hsp_hit-from>2382</Hsp_hit-from> + <Hsp_hit-to>2292</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>84</Hsp_identity> + <Hsp_positive>84</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>91</Hsp_align-len> + <Hsp_qseq>TTCGGC-TGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATC-ACCCACTTGCG--CCATCGCC-CAGGGT</Hsp_qseq> + <Hsp_hseq>TTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGT</Hsp_hseq> + <Hsp_midline>|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>9</Hit_num> + <Hit_id>gi|290792750|gb|GU178772.1|</Hit_id> + <Hit_def>Burkholderia multivorans strain FCF 11 proFAR isomerase (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU178772</Hit_accession> + <Hit_len>415</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>750.86</Hsp_bit-score> + <Hsp_score>406</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>415</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>412</Hsp_identity> + <Hsp_positive>412</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>415</Hsp_align-len> + <Hsp_qseq>GGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>GGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGACCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>196.865</Hsp_bit-score> + <Hsp_score>106</Hsp_score> + <Hsp_evalue>1.87522e-46</Hsp_evalue> + <Hsp_query-from>577</Hsp_query-from> + <Hsp_query-to>714</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>141</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>131</Hsp_identity> + <Hsp_positive>131</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>142</Hsp_align-len> + <Hsp_qseq>GGGTCGATCTCGGCG-CCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTTCGCCGGCAAGCCGAACAATCTCGATGAGATTGAAGCGAT-CTCGACGAATTCGGCGATGAGATCCCGGTGCAGCTCGGCG-CGGC-TTC</Hsp_qseq> + <Hsp_hseq>GGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCA-TTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTC</Hsp_hseq> + <Hsp_midline>||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||| ||||||||| |||||||||| ||||||||||||||||||| |||| |||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>106.379</Hsp_bit-score> + <Hsp_score>57</Hsp_score> + <Hsp_evalue>3.25089e-19</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>65</Hsp_query-to> + <Hsp_hit-from>67</Hsp_hit-from> + <Hsp_hit-to>1</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>64</Hsp_identity> + <Hsp_positive>64</Hsp_positive> + <Hsp_gaps>2</Hsp_gaps> + <Hsp_align-len>67</Hsp_align-len> + <Hsp_qseq>TTCGGC-TGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATC-ACCC</Hsp_qseq> + <Hsp_hseq>TTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATCGACCC</Hsp_hseq> + <Hsp_midline>|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>10</Hit_num> + <Hit_id>gi|290082961|gb|GU086399.1|</Hit_id> + <Hit_def>Burkholderia multivorans strain FCF6 HisA (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU086399</Hit_accession> + <Hit_len>414</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>749.013</Hsp_bit-score> + <Hsp_score>405</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>131</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>414</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>411</Hsp_identity> + <Hsp_positive>411</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>414</Hsp_align-len> + <Hsp_qseq>GGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>GGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGACCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>195.019</Hsp_bit-score> + <Hsp_score>105</Hsp_score> + <Hsp_evalue>6.7445e-46</Hsp_evalue> + <Hsp_query-from>578</Hsp_query-from> + <Hsp_query-to>714</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>140</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>130</Hsp_identity> + <Hsp_positive>130</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>141</Hsp_align-len> + <Hsp_qseq>GGTCGATCTCGGCG-CCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTTCGCCGGCAAGCCGAACAATCTCGATGAGATTGAAGCGAT-CTCGACGAATTCGGCGATGAGATCCCGGTGCAGCTCGGCG-CGGC-TTC</Hsp_qseq> + <Hsp_hseq>GGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCA-TTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTC</Hsp_hseq> + <Hsp_midline>|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||| ||||||||| |||||||||| ||||||||||||||||||| |||| |||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>104.533</Hsp_bit-score> + <Hsp_score>56</Hsp_score> + <Hsp_evalue>1.16923e-18</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>64</Hsp_query-to> + <Hsp_hit-from>66</Hsp_hit-from> + <Hsp_hit-to>1</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>63</Hsp_identity> + <Hsp_positive>63</Hsp_positive> + <Hsp_gaps>2</Hsp_gaps> + <Hsp_align-len>66</Hsp_align-len> + <Hsp_qseq>TTCGGC-TGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATC-ACC</Hsp_qseq> + <Hsp_hseq>TTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATCGACC</Hsp_hseq> + <Hsp_midline>|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>11</Hit_num> + <Hit_id>gi|294196006|gb|GU183892.1|</Hit_id> + <Hit_def>Burkholderia multivorans strain FCF9 ProFAR isomerase (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU183892</Hit_accession> + <Hit_len>397</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>728.7</Hsp_bit-score> + <Hsp_score>394</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>130</Hsp_query-from> + <Hsp_query-to>526</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>397</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>396</Hsp_identity> + <Hsp_positive>396</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>397</Hsp_align-len> + <Hsp_qseq>GGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGG</Hsp_qseq> + <Hsp_hseq>GGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGG</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>202.405</Hsp_bit-score> + <Hsp_score>109</Hsp_score> + <Hsp_evalue>4.03053e-48</Hsp_evalue> + <Hsp_query-from>577</Hsp_query-from> + <Hsp_query-to>714</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>141</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>132</Hsp_identity> + <Hsp_positive>132</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>142</Hsp_align-len> + <Hsp_qseq>GGGTCGATCTCGGCG-CCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTTCGCCGGCAAGCCGAACAATCTCGATGAGATTGAAGCGAT-CTCGACGAATTCGGCGATGAGATCCCGGTGCAGCTCGGCG-CGGC-TTC</Hsp_qseq> + <Hsp_hseq>GGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCG-TTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTC</Hsp_hseq> + <Hsp_midline>||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||| ||||||||| |||||||||| ||||||||||||||||||| |||| |||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>111.919</Hsp_bit-score> + <Hsp_score>60</Hsp_score> + <Hsp_evalue>6.98734e-21</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>65</Hsp_query-to> + <Hsp_hit-from>67</Hsp_hit-from> + <Hsp_hit-to>1</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>65</Hsp_identity> + <Hsp_positive>65</Hsp_positive> + <Hsp_gaps>2</Hsp_gaps> + <Hsp_align-len>67</Hsp_align-len> + <Hsp_qseq>TTCGGC-TGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATC-ACCC</Hsp_qseq> + <Hsp_hseq>TTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATCGACCC</Hsp_hseq> + <Hsp_midline>|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>12</Hit_num> + <Hit_id>gi|294196003|gb|GU183891.1|</Hit_id> + <Hit_def>Burkholderia multivorans strain FCF5 ProFAR isomerase (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU183891</Hit_accession> + <Hit_len>401</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>728.7</Hsp_bit-score> + <Hsp_score>394</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>145</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>400</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>398</Hsp_identity> + <Hsp_positive>398</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>400</Hsp_align-len> + <Hsp_qseq>CCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>CCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCATGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCCGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>180.245</Hsp_bit-score> + <Hsp_score>97</Hsp_score> + <Hsp_evalue>1.88854e-41</Hsp_evalue> + <Hsp_query-from>592</Hsp_query-from> + <Hsp_query-to>714</Hsp_query-to> + <Hsp_hit-from>2</Hsp_hit-from> + <Hsp_hit-to>126</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>117</Hsp_identity> + <Hsp_positive>117</Hsp_positive> + <Hsp_gaps>4</Hsp_gaps> + <Hsp_align-len>126</Hsp_align-len> + <Hsp_qseq>CCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTTCGCCGGCAAGCCGAACAATCTCGATGAGATTGAAGCGAT-CTCGACGAATTCGGCGATGAGATCCCGGTGCAGCTCGGCG-CGGC-TTC</Hsp_qseq> + <Hsp_hseq>CCGGCGGCTGCATCTCGTCGACCTGAACGGCGCG-TTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTC</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||| ||||||||| |||||||||| ||||||||||||||||||| |||| |||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>89.7595</Hsp_bit-score> + <Hsp_score>48</Hsp_score> + <Hsp_evalue>3.27397e-14</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>51</Hsp_query-to> + <Hsp_hit-from>52</Hsp_hit-from> + <Hsp_hit-to>1</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>51</Hsp_identity> + <Hsp_positive>51</Hsp_positive> + <Hsp_gaps>1</Hsp_gaps> + <Hsp_align-len>52</Hsp_align-len> + <Hsp_qseq>TTCGGC-TGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGG</Hsp_qseq> + <Hsp_hseq>TTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGG</Hsp_hseq> + <Hsp_midline>|||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>13</Hit_num> + <Hit_id>gi|290792752|gb|GU178773.1|</Hit_id> + <Hit_def>Burkholderia multivorans strain FCF 8 proFAR isomerase (hisA) gene, partial cds</Hit_def> + <Hit_accession>GU178773</Hit_accession> + <Hit_len>394</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>723.16</Hsp_bit-score> + <Hsp_score>391</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>151</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>394</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>393</Hsp_identity> + <Hsp_positive>393</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>394</Hsp_align-len> + <Hsp_qseq>GGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>GGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>171.012</Hsp_bit-score> + <Hsp_score>92</Hsp_score> + <Hsp_evalue>1.13661e-38</Hsp_evalue> + <Hsp_query-from>597</Hsp_query-from> + <Hsp_query-to>714</Hsp_query-to> + <Hsp_hit-from>1</Hsp_hit-from> + <Hsp_hit-to>120</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>112</Hsp_identity> + <Hsp_positive>112</Hsp_positive> + <Hsp_gaps>4</Hsp_gaps> + <Hsp_align-len>121</Hsp_align-len> + <Hsp_qseq>GGCTGCATCTCGTCGACCTGAACGGCGCGTTTCGCCGGCAAGCCGAACAATCTCGATGAGATTGAAGCGAT-CTCGACGAATTCGGCGATGAGATCCCGGTGCAGCTCGGCG-CGGC-TTC</Hsp_qseq> + <Hsp_hseq>GGCTGCATCTCGTCGACCTGAACGGCGCG-TTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTC</Hsp_hseq> + <Hsp_midline>||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||| ||||||||| |||||||||| ||||||||||||||||||| |||| |||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>78.6796</Hsp_bit-score> + <Hsp_score>42</Hsp_score> + <Hsp_evalue>7.08691e-11</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>45</Hsp_query-to> + <Hsp_hit-from>46</Hsp_hit-from> + <Hsp_hit-to>1</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>45</Hsp_identity> + <Hsp_positive>45</Hsp_positive> + <Hsp_gaps>1</Hsp_gaps> + <Hsp_align-len>46</Hsp_align-len> + <Hsp_qseq>TTCGGC-TGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCC</Hsp_qseq> + <Hsp_hseq>TTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCC</Hsp_hseq> + <Hsp_midline>|||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>14</Hit_num> + <Hit_id>gi|158343697|gb|EU057654.1|</Hit_id> + <Hit_def>Burkholderia dolosa strain LMG18942 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057654</Hit_accession> + <Hit_len>4833</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>717.62</Hsp_bit-score> + <Hsp_score>388</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>103</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>2316</Hsp_hit-from> + <Hsp_hit-to>2757</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>424</Hsp_identity> + <Hsp_positive>424</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTGGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGACGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATCCCCGTGCAGCTGGGCGGCGGCATCCGCAGTCTCGAGACGATCGAGAAATACCTCGATGCCGGTCTGTCGTACGTGATCATCGGCACCGCGGCCGTGAAGGATCCGGGCTTCCTGCGCGACGCGTGCACCGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGACCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTATACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| || ||||| || || ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>124.846</Hsp_bit-score> + <Hsp_score>67</Hsp_score> + <Hsp_evalue>8.97498e-25</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>86</Hsp_query-to> + <Hsp_hit-from>2409</Hsp_hit-from> + <Hsp_hit-to>2319</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>84</Hsp_identity> + <Hsp_positive>84</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>91</Hsp_align-len> + <Hsp_qseq>TTCGGC-TGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATC-ACCCACTTGCG--CCATCGCC-CAGGGT</Hsp_qseq> + <Hsp_hseq>TTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACCAGATGCAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGT</Hsp_hseq> + <Hsp_midline>|||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| | ||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>15</Hit_num> + <Hit_id>gi|158343687|gb|EU057653.1|</Hit_id> + <Hit_def>Burkholderia dolosa strain LMG18941 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057653</Hit_accession> + <Hit_len>4833</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>717.62</Hsp_bit-score> + <Hsp_score>388</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>103</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>2316</Hsp_hit-from> + <Hsp_hit-to>2757</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>424</Hsp_identity> + <Hsp_positive>424</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTGGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGACGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATCCCCGTGCAGCTGGGCGGCGGCATCCGCAGTCTCGAGACGATCGAGAAATACCTCGATGCCGGTCTGTCGTACGTGATCATCGGCACCGCGGCCGTGAAGGATCCGGGCTTCCTGCGCGACGCGTGCACCGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGACCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTATACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| || ||||| || || ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>124.846</Hsp_bit-score> + <Hsp_score>67</Hsp_score> + <Hsp_evalue>8.97498e-25</Hsp_evalue> + <Hsp_query-from>1</Hsp_query-from> + <Hsp_query-to>86</Hsp_query-to> + <Hsp_hit-from>2409</Hsp_hit-from> + <Hsp_hit-to>2319</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>-1</Hsp_hit-frame> + <Hsp_identity>84</Hsp_identity> + <Hsp_positive>84</Hsp_positive> + <Hsp_gaps>5</Hsp_gaps> + <Hsp_align-len>91</Hsp_align-len> + <Hsp_qseq>TTCGGC-TGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGCAGCCGCCGGGCGCCGAGATC-ACCCACTTGCG--CCATCGCC-CAGGGT</Hsp_qseq> + <Hsp_hseq>TTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACCAGATGCAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGT</Hsp_hseq> + <Hsp_midline>|||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| | ||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>16</Hit_num> + <Hit_id>gi|158343747|gb|EU057659.1|</Hit_id> + <Hit_def>Burkholderia ambifaria strain MCI7 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057659</Hit_accession> + <Hit_len>4807</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>695.461</Hsp_bit-score> + <Hsp_score>376</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>103</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>2289</Hsp_hit-from> + <Hsp_hit-to>2730</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>420</Hsp_identity> + <Hsp_positive>420</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTGGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAACCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATCCCCGTACAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGGTCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGGACCCGGGCTTCCTGCGGGATGCGTGCACCGCGTTCGCGGGCAACATCATCGTCGGCCTCGATGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACGGGCCACGAAGTGATCGATCTCGCGCTGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>17</Hit_num> + <Hit_id>gi|115280044|gb|CP000440.1|</Hit_id> + <Hit_def>Burkholderia ambifaria AMMD chromosome 1, complete sequence</Hit_def> + <Hit_accession>CP000440</Hit_accession> + <Hit_len>3556545</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>695.461</Hsp_bit-score> + <Hsp_score>376</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>103</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>391926</Hsp_hit-from> + <Hsp_hit-to>392367</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>420</Hsp_identity> + <Hsp_positive>420</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTGGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAACCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATCCCCGTACAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGGTCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGGACCCGGGCTTCCTGCGGGATGCGTGCACCGCGTTCGCGGGCAACATCATCGTCGGCCTCGATGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACGGGCCACGAAGTGATCGATCTCGCGCTGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>18</Hit_num> + <Hit_id>gi|77965403|gb|CP000151.1|</Hit_id> + <Hit_def>Burkholderia sp. 383 chromosome 1, complete sequence</Hit_def> + <Hit_accession>CP000151</Hit_accession> + <Hit_len>3694126</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>695.461</Hsp_bit-score> + <Hsp_score>376</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>103</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>394319</Hsp_hit-from> + <Hsp_hit-to>394760</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>420</Hsp_identity> + <Hsp_positive>420</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCCGTACAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCAGGCTTCCTGCAGGACGCGTGCACCGCGTTCGCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTCACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||| |||||| |||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +<Hit> + <Hit_num>19</Hit_num> + <Hit_id>gi|158343727|gb|EU057657.1|</Hit_id> + <Hit_def>Burkholderia ambifaria strain LMG19467 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds</Hit_def> + <Hit_accession>EU057657</Hit_accession> + <Hit_len>4807</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>689.921</Hsp_bit-score> + <Hsp_score>373</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>103</Hsp_query-from> + <Hsp_query-to>544</Hsp_query-to> + <Hsp_hit-from>2289</Hsp_hit-from> + <Hsp_hit-to>2730</Hsp_hit-to> + <Hsp_query-frame>1</Hsp_query-frame> + <Hsp_hit-frame>1</Hsp_hit-frame> + <Hsp_identity>419</Hsp_identity> + <Hsp_positive>419</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>442</Hsp_align-len> + <Hsp_qseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_qseq> + <Hsp_hseq>AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTGGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAACCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATCCCCGTACAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGGTCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGGACCCGGGCTTCCTGCGGGATGCGTGCACCGCGTTCGCGGGCAACATCATCGTCGGCCTCGATGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACGGGCCATGAAGTGATCGATCTCGCGCTGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA</Hsp_hseq> + <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline> + </Hsp> + </Hit_hsps> +</Hit> +</Iteration_hits> + <Iteration_stat> + <Statistics> + <Statistics_db-num>20069287</Statistics_db-num> + <Statistics_db-len>50671056400</Statistics_db-len> + <Statistics_hsp-len>33</Statistics_hsp-len> + <Statistics_eff-space>26454639292441</Statistics_eff-space> + <Statistics_kappa>0.46</Statistics_kappa> + <Statistics_lambda>1.28</Statistics_lambda> + <Statistics_entropy>0.85</Statistics_entropy> + </Statistics> + </Iteration_stat> +</Iteration> +</BlastOutput_iterations> +</BlastOutput> +
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/blast_reporting_1a.tabular Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,81 @@ +Assembly_67_BCC2_consensus_sequence_primers_removed gi|158343987|gb|EU057686.1| 99.77 442 1 0 103 544 2289 2730 0.0 811 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|158343677|gb|EU057652.1| 99.55 442 2 0 103 544 2285 2726 0.0 806 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|158343667|gb|EU057651.1| 99.55 442 2 0 103 544 2289 2730 0.0 806 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|189332915|dbj|AP009385.1| 99.55 442 2 0 103 544 3160621 3160180 0.0 806 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|160340609|gb|CP000868.1| 99.55 442 2 0 103 544 364152 364593 0.0 806 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|28971668|dbj|AB091436.1| 99.55 442 2 0 103 544 5598 6039 0.0 806 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|290792748|gb|GU178771.1| 99.32 442 3 0 103 544 4 445 0.0 800 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|158343637|gb|EU057648.1| 99.32 442 3 0 103 544 2289 2730 0.0 800 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|290792750|gb|GU178772.1| 99.28 415 3 0 130 544 1 415 0.0 750 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|290082961|gb|GU086399.1| 99.28 414 3 0 131 544 1 414 0.0 749 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|294196006|gb|GU183892.1| 99.75 397 1 0 130 526 1 397 0.0 728 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|294196003|gb|GU183891.1| 99.50 400 2 0 145 544 1 400 0.0 728 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|290792752|gb|GU178773.1| 99.75 394 1 0 151 544 1 394 0.0 723 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|158343697|gb|EU057654.1| 95.93 442 18 0 103 544 2316 2757 0.0 717 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|158343687|gb|EU057653.1| 95.93 442 18 0 103 544 2316 2757 0.0 717 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|158343747|gb|EU057659.1| 95.02 442 22 0 103 544 2289 2730 0.0 695 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|115280044|gb|CP000440.1| 95.02 442 22 0 103 544 391926 392367 0.0 695 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|77965403|gb|CP000151.1| 95.02 442 22 0 103 544 394319 394760 0.0 695 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|158343727|gb|EU057657.1| 94.80 442 23 0 103 544 2289 2730 0.0 689 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|77965403|gb|CP000151.1| 98.19 442 8 0 8 449 394760 394319 0.0 773 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343807|gb|EU057666.1| 97.74 442 10 0 8 449 2740 2299 0.0 761 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|293627936|gb|GU068979.1| 97.29 442 12 0 8 449 445 4 0.0 750 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343947|gb|EU057682.1| 97.29 442 12 0 8 449 2729 2288 0.0 750 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343937|gb|EU057680.1| 97.29 442 12 0 8 449 2729 2288 0.0 750 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343597|gb|EU057644.1| 97.06 442 13 0 8 449 2730 2289 0.0 745 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|402246008|gb|CP003774.1| 97.04 439 13 0 8 446 3371014 3371452 0.0 739 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|293627938|gb|GU068980.1| 96.83 442 14 0 8 449 445 4 0.0 739 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343777|gb|EU057663.1| 96.83 442 14 0 8 449 2734 2293 0.0 739 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343627|gb|EU057647.1| 96.83 442 14 0 8 449 2734 2293 0.0 739 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|290767135|gb|GU187008.1| 98.32 416 7 0 21 436 416 1 0.0 730 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343837|gb|EU057669.1| 96.38 442 16 0 8 449 2730 2289 0.0 728 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343647|gb|EU057649.1| 96.38 442 16 0 8 449 2730 2289 0.0 728 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|169814598|gb|CP000958.1| 96.38 442 16 0 8 449 448091 447650 0.0 728 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|290767131|gb|GU187006.1| 98.08 416 8 0 21 436 416 1 0.0 725 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|290565700|gb|GU170811.1| 96.15 442 17 0 8 449 445 4 0.0 723 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343957|gb|EU057683.1| 96.15 442 17 0 8 449 2728 2287 0.0 723 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343827|gb|EU057668.1| 99.77 442 1 0 130 571 2287 2728 0.0 811 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|290565700|gb|GU170811.1| 99.55 442 2 0 130 571 4 445 0.0 806 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343957|gb|EU057683.1| 99.55 442 2 0 130 571 2287 2728 0.0 806 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343867|gb|EU057672.1| 99.55 442 2 0 130 571 2287 2728 0.0 806 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343767|gb|EU057662.1| 99.55 442 2 0 130 571 2287 2728 0.0 806 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|290565702|gb|GU170812.1| 99.32 442 3 0 130 571 4 445 0.0 800 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343977|gb|EU057685.1| 99.32 442 3 0 130 571 2287 2728 0.0 800 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343847|gb|EU057670.1| 99.32 442 3 0 130 571 2287 2728 0.0 800 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343817|gb|EU057667.1| 99.32 442 3 0 130 571 2287 2728 0.0 800 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343787|gb|EU057664.1| 99.32 442 3 0 130 571 2287 2728 0.0 800 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|116646113|gb|CP000458.1| 99.32 442 3 0 130 571 479644 480085 0.0 800 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|105891751|gb|CP000378.1| 99.32 442 3 0 130 571 2947001 2946560 0.0 800 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343927|gb|EU057679.1| 99.10 442 4 0 130 571 2287 2728 0.0 795 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343897|gb|EU057675.1| 99.10 442 4 0 130 571 2287 2728 0.0 795 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343857|gb|EU057671.1| 99.10 442 4 0 130 571 2287 2728 0.0 795 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343757|gb|EU057661.1| 99.10 442 4 0 130 571 2287 2728 0.0 795 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343617|gb|EU057646.1| 99.10 442 4 0 130 571 2287 2728 0.0 795 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|290565698|gb|GU170810.1| 98.87 442 5 0 130 571 4 445 0.0 789 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343877|gb|EU057673.1| 98.87 442 5 0 130 571 2286 2727 0.0 789 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|190714214|emb|AM747720.1| 98.87 442 5 0 130 571 348935 349376 0.0 789 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|169814598|gb|CP000958.1| 98.87 442 5 0 130 571 447650 448091 0.0 789 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343967|gb|EU057684.1| 98.64 442 6 0 130 571 2287 2728 0.0 784 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343917|gb|EU057678.1| 97.51 442 11 0 130 571 2287 2728 0.0 756 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343907|gb|EU057677.1| 97.51 442 11 0 130 571 2287 2728 0.0 756 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343887|gb|EU057674.1| 97.51 442 11 0 130 571 2287 2728 0.0 756 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|158343837|gb|EU057669.1| 98.00 451 0 8 22 472 2730 2289 0.0 774 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|158343647|gb|EU057649.1| 98.00 451 0 8 22 472 2730 2289 0.0 774 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|294195954|gb|GU183875.1| 99.50 403 0 2 22 424 401 1 0.0 732 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|158343597|gb|EU057644.1| 95.57 451 11 8 22 472 2730 2289 0.0 713 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|293627938|gb|GU068980.1| 95.34 451 12 8 22 472 445 4 0.0 708 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|293627936|gb|GU068979.1| 95.34 451 12 8 22 472 445 4 0.0 708 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|158343777|gb|EU057663.1| 95.34 451 12 8 22 472 2734 2293 0.0 708 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|158343627|gb|EU057647.1| 95.34 451 12 8 22 472 2734 2293 0.0 708 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|77965403|gb|CP000151.1| 95.34 451 12 8 22 472 394760 394319 0.0 708 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|158343947|gb|EU057682.1| 95.12 451 13 7 22 472 2729 2288 0.0 702 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|158343937|gb|EU057680.1| 95.12 451 13 7 22 472 2729 2288 0.0 702 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|158343807|gb|EU057666.1| 95.12 451 13 7 22 472 2740 2299 0.0 702 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|294196000|gb|GU183890.1| 98.98 393 0 3 48 440 389 1 0.0 701 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|402246008|gb|CP003774.1| 94.64 448 15 8 22 469 3371014 3371452 0.0 686 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|290767135|gb|GU187008.1| 96.22 423 9 6 35 457 416 1 0.0 686 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|158343927|gb|EU057679.1| 94.01 451 18 8 22 472 2728 2287 0.0 675 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|158343897|gb|EU057675.1| 94.01 451 18 8 22 472 2728 2287 0.0 675 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|158343757|gb|EU057661.1| 94.01 451 18 8 22 472 2728 2287 0.0 675 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|158343617|gb|EU057646.1| 94.01 451 18 8 22 472 2728 2287 0.0 675 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|290767133|gb|GU187007.1| 96.78 404 9 3 35 438 400 1 0.0 671
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/blast_reporting_1b.tabular Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,51 @@ +Assembly_67_BCC2_consensus_sequence_primers_removed gi|158343987|gb|EU057686.1| 99.77 442 1 0 103 544 2289 2730 0.0 811 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|158343677|gb|EU057652.1| 99.55 442 2 0 103 544 2285 2726 0.0 806 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|158343667|gb|EU057651.1| 99.55 442 2 0 103 544 2289 2730 0.0 806 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|189332915|dbj|AP009385.1| 99.55 442 2 0 103 544 3160621 3160180 0.0 806 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|160340609|gb|CP000868.1| 99.55 442 2 0 103 544 364152 364593 0.0 806 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|28971668|dbj|AB091436.1| 99.55 442 2 0 103 544 5598 6039 0.0 806 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|290792748|gb|GU178771.1| 99.32 442 3 0 103 544 4 445 0.0 800 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|158343637|gb|EU057648.1| 99.32 442 3 0 103 544 2289 2730 0.0 800 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|290792750|gb|GU178772.1| 99.28 415 3 0 130 544 1 415 0.0 750 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|290082961|gb|GU086399.1| 99.28 414 3 0 131 544 1 414 0.0 749 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|294196006|gb|GU183892.1| 99.75 397 1 0 130 526 1 397 0.0 728 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|294196003|gb|GU183891.1| 99.50 400 2 0 145 544 1 400 0.0 728 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|290792752|gb|GU178773.1| 99.75 394 1 0 151 544 1 394 0.0 723 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|77965403|gb|CP000151.1| 98.19 442 8 0 8 449 394760 394319 0.0 773 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343807|gb|EU057666.1| 97.74 442 10 0 8 449 2740 2299 0.0 761 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|293627936|gb|GU068979.1| 97.29 442 12 0 8 449 445 4 0.0 750 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343947|gb|EU057682.1| 97.29 442 12 0 8 449 2729 2288 0.0 750 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343937|gb|EU057680.1| 97.29 442 12 0 8 449 2729 2288 0.0 750 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343597|gb|EU057644.1| 97.06 442 13 0 8 449 2730 2289 0.0 745 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|402246008|gb|CP003774.1| 97.04 439 13 0 8 446 3371014 3371452 0.0 739 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|290767135|gb|GU187008.1| 98.32 416 7 0 21 436 416 1 0.0 730 +Assembly_67_BCC6_consensus_sequence_primers_removed gi|290767131|gb|GU187006.1| 98.08 416 8 0 21 436 416 1 0.0 725 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343827|gb|EU057668.1| 99.77 442 1 0 130 571 2287 2728 0.0 811 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|290565700|gb|GU170811.1| 99.55 442 2 0 130 571 4 445 0.0 806 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343957|gb|EU057683.1| 99.55 442 2 0 130 571 2287 2728 0.0 806 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343867|gb|EU057672.1| 99.55 442 2 0 130 571 2287 2728 0.0 806 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343767|gb|EU057662.1| 99.55 442 2 0 130 571 2287 2728 0.0 806 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|290565702|gb|GU170812.1| 99.32 442 3 0 130 571 4 445 0.0 800 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343977|gb|EU057685.1| 99.32 442 3 0 130 571 2287 2728 0.0 800 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343847|gb|EU057670.1| 99.32 442 3 0 130 571 2287 2728 0.0 800 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343817|gb|EU057667.1| 99.32 442 3 0 130 571 2287 2728 0.0 800 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343787|gb|EU057664.1| 99.32 442 3 0 130 571 2287 2728 0.0 800 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|116646113|gb|CP000458.1| 99.32 442 3 0 130 571 479644 480085 0.0 800 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|105891751|gb|CP000378.1| 99.32 442 3 0 130 571 2947001 2946560 0.0 800 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343927|gb|EU057679.1| 99.10 442 4 0 130 571 2287 2728 0.0 795 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343897|gb|EU057675.1| 99.10 442 4 0 130 571 2287 2728 0.0 795 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343857|gb|EU057671.1| 99.10 442 4 0 130 571 2287 2728 0.0 795 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343757|gb|EU057661.1| 99.10 442 4 0 130 571 2287 2728 0.0 795 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343617|gb|EU057646.1| 99.10 442 4 0 130 571 2287 2728 0.0 795 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|290565698|gb|GU170810.1| 98.87 442 5 0 130 571 4 445 0.0 789 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343877|gb|EU057673.1| 98.87 442 5 0 130 571 2286 2727 0.0 789 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|190714214|emb|AM747720.1| 98.87 442 5 0 130 571 348935 349376 0.0 789 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|169814598|gb|CP000958.1| 98.87 442 5 0 130 571 447650 448091 0.0 789 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343967|gb|EU057684.1| 98.64 442 6 0 130 571 2287 2728 0.0 784 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343917|gb|EU057678.1| 97.51 442 11 0 130 571 2287 2728 0.0 756 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343907|gb|EU057677.1| 97.51 442 11 0 130 571 2287 2728 0.0 756 +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343887|gb|EU057674.1| 97.51 442 11 0 130 571 2287 2728 0.0 756 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|158343837|gb|EU057669.1| 98.00 451 0 8 22 472 2730 2289 0.0 774 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|158343647|gb|EU057649.1| 98.00 451 0 8 22 472 2730 2289 0.0 774 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|294195954|gb|GU183875.1| 99.50 403 0 2 22 424 401 1 0.0 732 +Assembly_67_BCC9_consensus_sequence_primers_removed gi|294196000|gb|GU183890.1| 98.98 393 0 3 48 440 389 1 0.0 701
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/blast_reporting_1c.tabular Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,52 @@ +Query Id Subject Id % Identical Length Mismatches Gaps-openings Q. Start Q. End S. Start S. End E-value Bit Score Subject Ids Raw Score Ident. Matches Pos. Matches Gaps % Positive Query Frame Subject Frame Q. Alignment S. Alignment Query Length Subject Length % Coverage Subject Descriptions +Assembly_67_BCC2_consensus_sequence_primers_removed gi|290792750|gb|GU178772.1| 99.28 415 3 0 130 544 1 415 0.0 750 gi|290792750|gb|GU178772.1| 406 412 412 0 99.28 1 1 GGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA GGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGACCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 719 415 57.72 Burkholderia multivorans strain FCF 11 proFAR isomerase (hisA) gene, partial cds +Assembly_67_BCC2_consensus_sequence_primers_removed gi|290082961|gb|GU086399.1| 99.28 414 3 0 131 544 1 414 0.0 749 gi|290082961|gb|GU086399.1| 405 411 411 0 99.28 1 1 GGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA GGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGACCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 719 414 57.58 Burkholderia multivorans strain FCF6 HisA (hisA) gene, partial cds +Assembly_67_BCC2_consensus_sequence_primers_removed gi|290792748|gb|GU178771.1| 99.32 442 3 0 103 544 4 445 0.0 800 gi|290792748|gb|GU178771.1| 433 439 439 0 99.32 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTTGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAAGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 719 448 61.47 Burkholderia multivorans strain FCF 10 proFAR isomerase (hisA) gene, partial cds +Assembly_67_BCC2_consensus_sequence_primers_removed gi|158343637|gb|EU057648.1| 99.32 442 3 0 103 544 2289 2730 0.0 800 gi|158343637|gb|EU057648.1| 433 439 439 0 99.32 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGACCCGGGCTTTCTGCGCGACGCATGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 719 4829 61.47 Burkholderia multivorans strain LMG13010 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC2_consensus_sequence_primers_removed gi|294196003|gb|GU183891.1| 99.50 400 2 0 145 544 1 400 0.0 728 gi|294196003|gb|GU183891.1| 394 398 398 0 99.50 1 1 CCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA CCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCATGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCCGCA 719 401 55.63 Burkholderia multivorans strain FCF5 ProFAR isomerase (hisA) gene, partial cds +Assembly_67_BCC2_consensus_sequence_primers_removed gi|158343677|gb|EU057652.1| 99.55 442 2 0 103 544 2285 2726 0.0 806 gi|158343677|gb|EU057652.1| 436 440 440 0 99.55 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTTGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 719 4825 61.47 Burkholderia multivorans strain LMG18822 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC2_consensus_sequence_primers_removed gi|158343667|gb|EU057651.1| 99.55 442 2 0 103 544 2289 2730 0.0 806 gi|158343667|gb|EU057651.1| 436 440 440 0 99.55 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 719 4829 61.47 Burkholderia multivorans strain LMG17588 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC2_consensus_sequence_primers_removed gi|189332915|dbj|AP009385.1| 99.55 442 2 0 103 544 3160621 3160180 0.0 806 gi|189332915|dbj|AP009385.1| 436 440 440 0 99.55 1 -1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 719 3448421 61.47 Burkholderia multivorans ATCC 17616 DNA, complete genome, chromosome 1 +Assembly_67_BCC2_consensus_sequence_primers_removed gi|160340609|gb|CP000868.1| 99.55 442 2 0 103 544 364152 364593 0.0 806 gi|160340609|gb|CP000868.1| 436 440 440 0 99.55 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 719 3448466 61.47 Burkholderia multivorans ATCC 17616 chromosome 1, complete sequence +Assembly_67_BCC2_consensus_sequence_primers_removed gi|28971668|dbj|AB091436.1| 99.55 442 2 0 103 544 5598 6039 0.0 806 gi|28971668|dbj|AB091436.1| 436 440 440 0 99.55 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 719 8467 61.47 Burkholderia multivorans genes for UDP-N-glucosamine 1-carboxyvinyltransferase, ATP phosphoribosyl transferase, histidinol dehydrogenase, histidinol-phosphate aminotransferase, imidazoleglycerol-phosphate dehydratase, probable transmembrane proteins, glutamine amidotransferase, phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, imidazole glycerol phosphate synthase, phosphoribosyl-AMP cyclohydrolase, phosphoribosyl-ATP pyrophosphatase, partial and complete cds +Assembly_67_BCC2_consensus_sequence_primers_removed gi|294196006|gb|GU183892.1| 99.75 397 1 0 130 526 1 397 0.0 728 gi|294196006|gb|GU183892.1| 394 396 396 0 99.75 1 1 GGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGG GGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGG 719 397 55.22 Burkholderia multivorans strain FCF9 ProFAR isomerase (hisA) gene, partial cds +Assembly_67_BCC2_consensus_sequence_primers_removed gi|290792752|gb|GU178773.1| 99.75 394 1 0 151 544 1 394 0.0 723 gi|290792752|gb|GU178773.1| 391 393 393 0 99.75 1 1 GGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA GGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 719 394 54.80 Burkholderia multivorans strain FCF 8 proFAR isomerase (hisA) gene, partial cds +Assembly_67_BCC2_consensus_sequence_primers_removed gi|158343987|gb|EU057686.1| 99.77 442 1 0 103 544 2289 2730 0.0 811 gi|158343987|gb|EU057686.1| 439 441 441 0 99.77 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 719 4829 61.47 Burkholderia multivorans strain FCF7 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC6_consensus_sequence_primers_removed gi|402246008|gb|CP003774.1| 97.04 439 13 0 8 446 3371014 3371452 0.0 739 gi|402246008|gb|CP003774.1| 400 426 426 0 97.04 1 1 TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGT TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCATCGAGGCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGGTCCTTCACGGCCGCCGTACCGATGATCACGTAGGACAGGCCGGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGT 557 3463655 78.82 Burkholderia cepacia GG4 chromosome 1, complete sequence +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343597|gb|EU057644.1| 97.06 442 13 0 8 449 2730 2289 0.0 745 gi|158343597|gb|EU057644.1| 403 429 429 0 97.06 1 -1 TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT TGCAGCATCCCGTCGCGGCCGATATCCGTGTAGACGATCGACTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGGTCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACCAGATGCAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT 557 4808 79.35 Burkholderia pyrrocinia strain ATCC 15958 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC6_consensus_sequence_primers_removed gi|293627936|gb|GU068979.1| 97.29 442 12 0 8 449 445 4 0.0 750 gi|293627936|gb|GU068979.1| 406 430 430 0 97.29 1 -1 TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACAATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGACCACTTCGTGGCCCGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGTTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT 557 448 79.35 Burkholderia cepacia strain FCF1 1-(5-phosphoribosyl)-5-(5-phosphoribosylamino) methylideneamino (hisA) gene, partial cds +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343947|gb|EU057682.1| 97.29 442 12 0 8 449 2729 2288 0.0 750 gi|158343947|gb|EU057682.1| 406 430 430 0 97.29 1 -1 TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGACTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCATCCAGCCCGACGATGATGTTGCCGGCGAACGCGGTGCATGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCATTTGCGGGCCATCGCCGCCGGGTCCT 557 4804 79.35 Burkholderia pyrrocinia strain FCF44 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343937|gb|EU057680.1| 97.29 442 12 0 8 449 2729 2288 0.0 750 gi|158343937|gb|EU057680.1| 406 430 430 0 97.29 1 -1 TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGACTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCATCCAGCCCGACGATGATGTTGCCGGCGAACGCGGTGCATGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCATTTGCGGGCCATCGCCGCCGGGTCCT 557 4807 79.35 Burkholderia pyrrocinia strain FCF43 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC6_consensus_sequence_primers_removed gi|158343807|gb|EU057666.1| 97.74 442 10 0 8 449 2740 2299 0.0 761 gi|158343807|gb|EU057666.1| 412 432 432 0 97.74 1 -1 TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGACTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCATCCAGCCCGACGATGATGTTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCATTTGCGGGCCATCGCCGCCGGGTCCT 557 4818 79.35 Burkholderia pyrrocinia strain MVPC1/26 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC6_consensus_sequence_primers_removed gi|290767131|gb|GU187006.1| 98.08 416 8 0 21 436 416 1 0.0 725 gi|290767131|gb|GU187006.1| 392 408 408 0 98.08 1 -1 CGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATC CGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCTGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATC 557 416 74.69 Burkholderia lata strain LMG 6991 proFAR isomerase (hisA) gene, partial cds +Assembly_67_BCC6_consensus_sequence_primers_removed gi|77965403|gb|CP000151.1| 98.19 442 8 0 8 449 394760 394319 0.0 773 gi|77965403|gb|CP000151.1| 418 434 434 0 98.19 1 -1 TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCTGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT 557 3694126 79.35 Burkholderia sp. 383 chromosome 1, complete sequence +Assembly_67_BCC6_consensus_sequence_primers_removed gi|290767135|gb|GU187008.1| 98.32 416 7 0 21 436 416 1 0.0 730 gi|290767135|gb|GU187008.1| 395 409 409 0 98.32 1 -1 CGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATC CGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATC 557 416 74.69 Burkholderia lata strain LMG 6990 proFAR isomerase (hisA) gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343917|gb|EU057678.1| 97.51 442 11 0 130 571 2287 2728 0.0 756 gi|158343917|gb|EU057678.1| 409 431 431 0 97.51 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTGCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCGGCCGTGAAGAATCCGGGCTTCCTGCAGGACGCATGCACCGCGTTCTCGGGCAACATCATCGTCGGGCTGGATGCGAAGGACGGCAAGGTCGCGACCGATGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 787 4802 56.16 Burkholderia cenocepacia strain FCF32 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343907|gb|EU057677.1| 97.51 442 11 0 130 571 2287 2728 0.0 756 gi|158343907|gb|EU057677.1| 409 431 431 0 97.51 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTGCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCGGCCGTGAAGAATCCGGGCTTCCTGCAGGACGCATGCACCGCGTTCTCGGGCAACATCATCGTCGGGCTGGATGCGAAGGACGGCAAGGTCGCGACCGATGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 787 4802 56.16 Burkholderia cenocepacia strain FCF39 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343887|gb|EU057674.1| 97.51 442 11 0 130 571 2287 2728 0.0 756 gi|158343887|gb|EU057674.1| 409 431 431 0 97.51 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTGCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCGGCCGTGAAGAATCCGGGCTTCCTGCAGGACGCATGCACCGCGTTCTCGGGCAACATCATCGTCGGGCTGGATGCGAAGGACGGCAAGGTCGCGACCGATGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 787 4787 56.16 Burkholderia cenocepacia strain FCF38 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343967|gb|EU057684.1| 98.64 442 6 0 130 571 2287 2728 0.0 784 gi|158343967|gb|EU057684.1| 424 436 436 0 98.64 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCTTGCAGGACGCGTGCACCGCGTTCCCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 787 4803 56.16 Burkholderia cenocepacia strain FCF13 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|290565698|gb|GU170810.1| 98.87 442 5 0 130 571 4 445 0.0 789 gi|290565698|gb|GU170810.1| 427 437 437 0 98.87 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCAGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 787 448 56.16 Burkholderia cenocepacia strain LMG16656 ProFAR isomerase (hisA) gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343877|gb|EU057673.1| 98.87 442 5 0 130 571 2286 2727 0.0 789 gi|158343877|gb|EU057673.1| 427 437 437 0 98.87 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGTACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCATTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 787 4802 56.16 Burkholderia cenocepacia strain FCF31 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|190714214|emb|AM747720.1| 98.87 442 5 0 130 571 348935 349376 0.0 789 gi|190714214|emb|AM747720.1| 427 437 437 0 98.87 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCAGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 787 3870082 56.16 Burkholderia cenocepacia J2315 chromosome 1, complete genome +Assembly_67_BCC8_consensus_sequence_primers_removed gi|169814598|gb|CP000958.1| 98.87 442 5 0 130 571 447650 448091 0.0 789 gi|169814598|gb|CP000958.1| 427 437 437 0 98.87 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAACCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAATCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 787 3532883 56.16 Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343927|gb|EU057679.1| 99.10 442 4 0 130 571 2287 2728 0.0 795 gi|158343927|gb|EU057679.1| 430 438 438 0 99.10 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 787 4803 56.16 Burkholderia cenocepacia strain FCF16 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343897|gb|EU057675.1| 99.10 442 4 0 130 571 2287 2728 0.0 795 gi|158343897|gb|EU057675.1| 430 438 438 0 99.10 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 787 4803 56.16 Burkholderia cenocepacia strain FCF17 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343857|gb|EU057671.1| 99.10 442 4 0 130 571 2287 2728 0.0 795 gi|158343857|gb|EU057671.1| 430 438 438 0 99.10 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTTGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA 787 4797 56.16 Burkholderia cenocepacia strain FCF23 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343757|gb|EU057661.1| 99.10 442 4 0 130 571 2287 2728 0.0 795 gi|158343757|gb|EU057661.1| 430 438 438 0 99.10 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 787 4803 56.16 Burkholderia cenocepacia strain FCF14 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343617|gb|EU057646.1| 99.10 442 4 0 130 571 2287 2728 0.0 795 gi|158343617|gb|EU057646.1| 430 438 438 0 99.10 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 787 4803 56.16 Burkholderia cenocepacia strain FCF15 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|290565702|gb|GU170812.1| 99.32 442 3 0 130 571 4 445 0.0 800 gi|290565702|gb|GU170812.1| 433 439 439 0 99.32 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA 787 448 56.16 Burkholderia cenocepacia strain FCF21 ProFAR isomerase (hisA) gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343977|gb|EU057685.1| 99.32 442 3 0 130 571 2287 2728 0.0 800 gi|158343977|gb|EU057685.1| 433 439 439 0 99.32 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA 787 4803 56.16 Burkholderia cenocepacia strain FCF28 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343847|gb|EU057670.1| 99.32 442 3 0 130 571 2287 2728 0.0 800 gi|158343847|gb|EU057670.1| 433 439 439 0 99.32 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA 787 4803 56.16 Burkholderia cenocepacia strain FCF22 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343817|gb|EU057667.1| 99.32 442 3 0 130 571 2287 2728 0.0 800 gi|158343817|gb|EU057667.1| 433 439 439 0 99.32 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA 787 4803 56.16 Burkholderia cenocepacia strain FCF19 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343787|gb|EU057664.1| 99.32 442 3 0 130 571 2287 2728 0.0 800 gi|158343787|gb|EU057664.1| 433 439 439 0 99.32 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA 787 4803 56.16 Burkholderia cenocepacia strain FCF25 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|116646113|gb|CP000458.1| 99.32 442 3 0 130 571 479644 480085 0.0 800 gi|116646113|gb|CP000458.1| 433 439 439 0 99.32 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA 787 3483902 56.16 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence +Assembly_67_BCC8_consensus_sequence_primers_removed gi|105891751|gb|CP000378.1| 99.32 442 3 0 130 571 2947001 2946560 0.0 800 gi|105891751|gb|CP000378.1| 433 439 439 0 99.32 1 -1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA 787 3294563 56.16 Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence +Assembly_67_BCC8_consensus_sequence_primers_removed gi|290565700|gb|GU170811.1| 99.55 442 2 0 130 571 4 445 0.0 806 gi|290565700|gb|GU170811.1| 436 440 440 0 99.55 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 787 448 56.16 Burkholderia cenocepacia strain FCF26 ProFAR isomerase (hisA) gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343957|gb|EU057683.1| 99.55 442 2 0 130 571 2287 2728 0.0 806 gi|158343957|gb|EU057683.1| 436 440 440 0 99.55 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 787 4803 56.16 Burkholderia cenocepacia strain FCF27 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343867|gb|EU057672.1| 99.55 442 2 0 130 571 2287 2728 0.0 806 gi|158343867|gb|EU057672.1| 436 440 440 0 99.55 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 787 4803 56.16 Burkholderia cenocepacia strain FCF30 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343767|gb|EU057662.1| 99.55 442 2 0 130 571 2287 2728 0.0 806 gi|158343767|gb|EU057662.1| 436 440 440 0 99.55 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 787 4804 56.16 Burkholderia cenocepacia strain FCF24 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC8_consensus_sequence_primers_removed gi|158343827|gb|EU057668.1| 99.77 442 1 0 130 571 2287 2728 0.0 811 gi|158343827|gb|EU057668.1| 439 441 441 0 99.77 1 1 AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 787 4804 56.16 Burkholderia cenocepacia strain FCF20 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC9_consensus_sequence_primers_removed gi|158343837|gb|EU057669.1| 98.00 451 0 8 22 472 2730 2289 0.0 774 gi|158343837|gb|EU057669.1| 419 442 442 9 98.00 1 -1 TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGTCCT 558 4804 80.82 Burkholderia stabilis strain FCF41 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC9_consensus_sequence_primers_removed gi|158343647|gb|EU057649.1| 98.00 451 0 8 22 472 2730 2289 0.0 774 gi|158343647|gb|EU057649.1| 419 442 442 9 98.00 1 -1 TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGTCCT 558 4766 80.82 Burkholderia stabilis strain LMG14294 histidinol-phosphate aminotransferase (hisC) gene, partial cds; imidazole glycerol phosphate dehydratase (hisB), multiple antibiotic resistance-related protein (marC), imidazole glycerol phosphate synthase glutamine amidotransferase subunit (hisH), phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA), imidazole glycerol phosphate synthase subunit (hisF), phosphoribosyl-AMP cyclohydrolase (hisI), and phosphoribosyl-ATP pyrophosphohydrolase (hisE) genes, complete cds; and membrane protein gene, partial cds +Assembly_67_BCC9_consensus_sequence_primers_removed gi|294196000|gb|GU183890.1| 98.98 393 0 3 48 440 389 1 0.0 701 gi|294196000|gb|GU183890.1| 379 389 389 4 98.98 1 -1 CGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCC CGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCGACCC 558 389 70.43 Burkholderia stabilis strain LMG 18870 ProFAR isomerase (hisA) gene, partial cds +Assembly_67_BCC9_consensus_sequence_primers_removed gi|294195954|gb|GU183875.1| 99.50 403 0 2 22 424 401 1 0.0 732 gi|294195954|gb|GU183875.1| 396 401 401 2 99.50 1 -1 TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGC TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGC 558 401 72.22 Burkholderia stabilis strain FCF40 ProFAR isomerase (hisA) gene, partial cds
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/blast_reporting_1c1.tabular Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,55 @@ +Assembly_67_BCC2_consensus_sequence_primers_removed GGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCGTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 0 1 +gi|290792750|gb|GU178772.1| GGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGACCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 0 2 +gi|290082961|gb|GU086399.1| GGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGACCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 0 3 +gi|290792748|gb|GU178771.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTTGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAAGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 0 4 +gi|158343637|gb|EU057648.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGACCCGGGCTTTCTGCGCGACGCATGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 0 5 +gi|294196003|gb|GU183891.1| CCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCATGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCCGCA 0 6 +gi|158343677|gb|EU057652.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTTGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 0 7 +gi|158343667|gb|EU057651.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 0 8 +gi|189332915|dbj|AP009385.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 0 9 +gi|160340609|gb|CP000868.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 0 10 +gi|28971668|dbj|AB091436.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 0 11 +gi|294196006|gb|GU183892.1| GGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGG 0 12 +gi|290792752|gb|GU178773.1| GGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 0 13 +gi|158343987|gb|EU057686.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTGCATCTCGTCGACCTGAACGGCGCGTTCGCCGGCAAGCCGAAGAATCTCGATGCGATCGAAGCGATCCTCGACGAAGTCGGCGATGAAATCCCGGTGCAGCTCGGCGGCGGCATTCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCGGGCCTGTCGTACGTGATCATCGGCACGGCGGCCGTGAAGGATCCGGGCTTTCTGCGCGACGCCTGCACGGCGTTCCAGGGCAACATCATCGTCGGCCTCGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAAGTGATCGATCTCGCGCAGAAGTTCGAGGATTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 0 14 +Assembly_67_BCC6_consensus_sequence_primers_removed TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCATCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCAACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGT 1 15 +gi|402246008|gb|CP003774.1| TGCAGCATCCCGTCGCGACCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCATCGAGGCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGGTCCTTCACGGCCGCCGTACCGATGATCACGTAGGACAGGCCGGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGT 1 16 +gi|158343597|gb|EU057644.1| TGCAGCATCCCGTCGCGGCCGATATCCGTGTAGACGATCGACTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGGTCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACCAGATGCAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT 1 17 +gi|293627936|gb|GU068979.1| TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACAATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGACCACTTCGTGGCCCGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGTTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCGGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT 1 18 +gi|158343947|gb|EU057682.1| TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGACTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCATCCAGCCCGACGATGATGTTGCCGGCGAACGCGGTGCATGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCATTTGCGGGCCATCGCCGCCGGGTCCT 1 19 +gi|158343937|gb|EU057680.1| TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGACTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCATCCAGCCCGACGATGATGTTGCCGGCGAACGCGGTGCATGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCATTTGCGGGCCATCGCCGCCGGGTCCT 1 20 +gi|158343807|gb|EU057666.1| TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGACTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCATCCAGCCCGACGATGATGTTGCCGGCGAACGCGGTGCACGCATCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACCAGATGGAGCCGCCGGGCGCCGAGATCGACCCATTTGCGGGCCATCGCCGCCGGGTCCT 1 21 +gi|290767131|gb|GU187006.1| CGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCTGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATC 1 22 +gi|77965403|gb|CP000151.1| TGCAGCATCCCGTCGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTGCGCGAGATCGATCACTTCGTGGCCGGTGAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCTGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAATGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATCGCCGCCGGGTCCT 1 23 +gi|290767135|gb|GU187008.1| CGCGGCCGATGTCCGTGTAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCGGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATGATCACGTAGGACAGGCCCGCGTCGAGATACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGTACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCTTCGATCGCCTCGAGATTCTTCGGCTTGCCGGCGAACGCGCCGTTCAGGTCGACGAGATGGAGCCGCCGGGCGCCGAGATCGACCCACTTGCGGGCCATC 1 24 +Assembly_67_BCC8_consensus_sequence_primers_removed AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 2 25 +gi|158343917|gb|EU057678.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTGCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCGGCCGTGAAGAATCCGGGCTTCCTGCAGGACGCATGCACCGCGTTCTCGGGCAACATCATCGTCGGGCTGGATGCGAAGGACGGCAAGGTCGCGACCGATGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 2 26 +gi|158343907|gb|EU057677.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTGCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCGGCCGTGAAGAATCCGGGCTTCCTGCAGGACGCATGCACCGCGTTCTCGGGCAACATCATCGTCGGGCTGGATGCGAAGGACGGCAAGGTCGCGACCGATGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 2 27 +gi|158343887|gb|EU057674.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTGCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCGGCCGTGAAGAATCCGGGCTTCCTGCAGGACGCATGCACCGCGTTCTCGGGCAACATCATCGTCGGGCTGGATGCGAAGGACGGCAAGGTCGCGACCGATGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGTGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 2 28 +gi|158343967|gb|EU057684.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCTTGCAGGACGCGTGCACCGCGTTCCCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 2 29 +gi|290565698|gb|GU170810.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCAGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 2 30 +gi|158343877|gb|EU057673.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGTACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCATTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 2 31 +gi|190714214|emb|AM747720.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCAGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 2 32 +gi|169814598|gb|CP000958.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAACCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAATCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 2 33 +gi|158343927|gb|EU057679.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 2 34 +gi|158343897|gb|EU057675.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 2 35 +gi|158343857|gb|EU057671.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTTGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA 2 36 +gi|158343757|gb|EU057661.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 2 37 +gi|158343617|gb|EU057646.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTCTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGTCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGATTACGGCGTCGAATCGATCGTCTACACGGACATCGGCCGCGACGGGATGCTGCA 2 38 +gi|290565702|gb|GU170812.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA 2 39 +gi|158343977|gb|EU057685.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA 2 40 +gi|158343847|gb|EU057670.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA 2 41 +gi|158343817|gb|EU057667.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA 2 42 +gi|158343787|gb|EU057664.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA 2 43 +gi|116646113|gb|CP000458.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA 2 44 +gi|105891751|gb|CP000378.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGATATCGGCCGCGACGGGATGCTGCA 2 45 +gi|290565700|gb|GU170811.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 2 46 +gi|158343957|gb|EU057683.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 2 47 +gi|158343867|gb|EU057672.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 2 48 +gi|158343767|gb|EU057662.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACCGCCGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGCGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 2 49 +gi|158343827|gb|EU057668.1| AGGACCCGGCGGCGATGGCCCGCAAGTGGGTCGATCTCGGCGCCCGGCGGCTCCATCTCGTCGACCTGAACGGCGCATTCGCCGGCAAGCCGAAGAATCTCGAGGCGATCGAAGCGATCCTCGACGAAGTCGGCGACGAAATTCCCGTCCAGCTCGGCGGCGGCATCCGCAGCCTCGAGACGATCGAGAAGTATCTCGACGCCGGCCTGTCCTACGTGATCATCGGCACGGCGGCCGTGAAGAACCCGGGCTTCCTGCAGGACGCGTGCACCGCGTTTTCCGGCAGCATCATCGTCGGGCTGGACGCGAAGGACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTGACCGGCCACGAGGTGATCGATCTCGCGAAGAAGTTCGAGGACTACGGTGTCGAATCGATCGTCTACACCGACATCGGCCGCGACGGGATGCTGCA 2 50 +Assembly_67_BCC9_consensus_sequence_primers_removed TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCGNTTCAGGTCGACCAGATGGAGCCGCCNGGGCGCCCNGAGATCGACCCACCTTTGCGGGGCCATCGGCCCGCCGGGTCCT 3 51 +gi|158343837|gb|EU057669.1| TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGTCCT 3 52 +gi|158343647|gb|EU057649.1| TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCGACCCAC-TT-GCGGG-CCATCG-CC-GCCGGGTCCT 3 53 +gi|294196000|gb|GU183890.1| CGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGCGCC--GAGATCGACCC 3 54 +gi|294195954|gb|GU183875.1| TGCAGCATCCCGTCGCGGCCGATGTCCGTATAGACGATCGATTCGACGCCGTAGTCCTCGAACTTCTTCGCGAGATCGATCACTTCGTGGCCCGTCAGCTTGCTCCAGCCGTCGGTCGCGACCTTGCCGTCCTTCGCGTCCAGCCCGACGATGATGCTGCCCGCGAACGCGGTGCACGCGTCCTGCAGGAAGCCCGGATCCTTCACGGCCGCCGTGCCGATAATCACGTAGGACAGGCCCGCGTCGAGGTACTTCTCGATCGTCTCGAGGCTGCGGATGCCGCCGCCGAGCTGCACGGGGATTTCATCGCCGACTTCGTCGAGGATCGCCTCGATCGCCTCGAGATTCCTCGGCTTGCCGGCGAATGCGCCG-TTCAGGTCGACCAGATGGAGCCGCC-GGGC 3 55
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/blastx_sample.xml Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,758 @@ +<?xml version="1.0"?> +<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "NCBI_BlastOutput.dtd"> +<BlastOutput> + <BlastOutput_program>blastx</BlastOutput_program> + <BlastOutput_version>BLASTX 2.2.24+</BlastOutput_version> + <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference> + <BlastOutput_db>/share/BlastDB/nr</BlastOutput_db> + <BlastOutput_query-ID>Query_1</BlastOutput_query-ID> + <BlastOutput_query-def>phage_suis</BlastOutput_query-def> + <BlastOutput_query-len>1890</BlastOutput_query-len> + <BlastOutput_param> + <Parameters> + <Parameters_matrix>BLOSUM62</Parameters_matrix> + <Parameters_expect>0.001</Parameters_expect> + <Parameters_gap-open>11</Parameters_gap-open> + <Parameters_gap-extend>1</Parameters_gap-extend> + <Parameters_filter>L;</Parameters_filter> + </Parameters> + </BlastOutput_param> + <BlastOutput_iterations> + <Iteration> + <Iteration_iter-num>1</Iteration_iter-num> + <Iteration_query-ID>Query_1</Iteration_query-ID> + <Iteration_query-def>phage_suis</Iteration_query-def> + <Iteration_query-len>1890</Iteration_query-len> + <Iteration_hits> + <Hit> + <Hit_num>1</Hit_num> + <Hit_id>gi|119953746|ref|YP_950551.1|</Hit_id> + <Hit_def>tail tape measure protein [Streptococcus phage SMP] >gi|118430558|gb|ABK91882.1| tail tape measure protein [Streptococcus phage SMP]</Hit_def> + <Hit_accession>YP_950551</Hit_accession> + <Hit_len>659</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>988.407949172964</Hsp_bit-score> + <Hsp_score>2554</Hsp_score> + <Hsp_evalue>0</Hsp_evalue> + <Hsp_query-from>336</Hsp_query-from> + <Hsp_query-to>1889</Hsp_query-to> + <Hsp_hit-from>25</Hsp_hit-from> + <Hsp_hit-to>542</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>518</Hsp_identity> + <Hsp_positive>518</Hsp_positive> + <Hsp_gaps>0</Hsp_gaps> + <Hsp_align-len>518</Hsp_align-len> + <Hsp_qseq>NWFHLLNSGGSALSVMFAKLVGIIAGISAPIWXXXXXXXXXXXXXXXXYNTNEEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVSGAIDWAKGLLGIKS</Hsp_qseq> + <Hsp_hseq>NWFHLLNSGGSALSVMFAKLVGIIAGISAPIWAVIGVIAALVAGFVLLYNTNEEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVSGAIDWAKGLLGIKS</Hsp_hseq> + <Hsp_midline>NWFHLLNSGGSALSVMFAKLVGIIAGISAPIWAVIGVIAALVAGFVLLYNTNEEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVSGAIDWAKGLLGIKS</Hsp_midline> + </Hsp> + </Hit_hsps> + </Hit> + <Hit> + <Hit_num>2</Hit_num> + <Hit_id>gi|289551554|ref|YP_003472458.1|</Hit_id> + <Hit_def>Phage tail length tape-measure protein [Staphylococcus lugdunensis HKU09-01] >gi|289181085|gb|ADC88330.1| Phage tail length tape-measure protein [Staphylococcus lugdunensis HKU09-01]</Hit_def> + <Hit_accession>YP_003472458</Hit_accession> + <Hit_len>1220</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>256.91395450591</Hsp_bit-score> + <Hsp_score>655</Hsp_score> + <Hsp_evalue>5.97108392092708e-66</Hsp_evalue> + <Hsp_query-from>342</Hsp_query-from> + <Hsp_query-to>1889</Hsp_query-to> + <Hsp_hit-from>657</Hsp_hit-from> + <Hsp_hit-to>1106</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>170</Hsp_identity> + <Hsp_positive>254</Hsp_positive> + <Hsp_gaps>66</Hsp_gaps> + <Hsp_align-len>516</Hsp_align-len> + <Hsp_qseq>FHLLNSGGSALSVMFAKLVGIIAGISAPIWXXXXXXXXXXXXXXXXYNTNEEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVSGAIDWAKGLLGIKS</Hsp_qseq> + <Hsp_hseq>FTLLFGKASLVRTVFGLLVGVFTSLSAPVLAVIAVIGSLVAIFVYLWKTNDGFREACINAWNVIKTTVSTVVTVIVAFVKSIWGGLVAWWQQNHVLIQAAATVVWNAIKTVIMTVMNALGPSMKTAWEVIKQAVIIVWEFIKTYVQVAIAVVSGVIKTVMQLITGDWSGAWNTIKQTAMTVWNLIKS-------GATAIFNA----LKVALSAIWNAIKSAASGAWNDMKAVIVAAVNYIKNRVQAQWNTLKAITTGVWNGIKAVISAVWNAIKSFVTSSVSKVKSSVSSGFNSVRNV-------VRSVMSA---------------VKSFISSAWNGVKSIVSGAVGAVKSFVSSGFNAVRNTVSSIMSRVKGIISSI-----------WNSIKSTVSNAVHNMTSA----------------------MSSGMSRMGSAVHSGMSRVSSAVRNGISGAYNAVRGGVYRMVSAGADLARGIARGIMNMAGYVMSRARALASRAVSAIKSALRIHS</Hsp_hseq> + <Hsp_midline>F LL S + +F LVG+ +SAP+ AVI VI +LVA FV L+ TN+ FR AW IK+ +ST V +V+FV +WG +VAWW +N LI+ A VWNAI+TV+ TVM AL P ++TAW++I V V IKT V + VV G+IK VMQ+I GDWSGAW T+K A T+W IKS G IF LK +W I + W+ +K + A+ + +Q +++ VWN I V S +W AI + V S ++ + + + ++ V +++V +A +K IS+AW +K+ S A+ +F+S + ++ S+ +K IS++ WN+IK+++SNA++N+ SA +S+G + + S V + R+ SAVR G A NA R + +S G DL G G+ AG ++ S A+ K L I S</Hsp_midline> + </Hsp> + </Hit_hsps> + </Hit> + <Hit> + <Hit_num>3</Hit_num> + <Hit_id>gi|223044325|ref|ZP_03614360.1|</Hit_id> + <Hit_def>phage tape measure protein [Staphylococcus capitis SK14] >gi|222442293|gb|EEE48403.1| phage tape measure protein [Staphylococcus capitis SK14]</Hit_def> + <Hit_accession>ZP_03614360</Hit_accession> + <Hit_len>1320</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>252.67675917082</Hsp_bit-score> + <Hsp_score>644</Hsp_score> + <Hsp_evalue>1.12609769207128e-64</Hsp_evalue> + <Hsp_query-from>393</Hsp_query-from> + <Hsp_query-to>1889</Hsp_query-to> + <Hsp_hit-from>655</Hsp_hit-from> + <Hsp_hit-to>1193</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>165</Hsp_identity> + <Hsp_positive>275</Hsp_positive> + <Hsp_gaps>54</Hsp_gaps> + <Hsp_align-len>546</Hsp_align-len> + <Hsp_qseq>LVGIIAGISAPIWXXXXXXXXXXXXXXXXYNTNEEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTA---ETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLV---------------QVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVG-------PIWDWIKTT-------VSNAITAVWEIIQNIMTSIQTTW----DTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVS-----------AVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVSGAIDWAKGLLGIKS</Hsp_qseq> + <Hsp_hseq>LGGVLAALSGPVGIVIAAVAAVIAIFVALWNSSETLRNALTDAWNAIASSVGAAIQAVLGFLGDLFGRA-------QEILAPLAPMFQQVWSQIVAIVDTAVNVIAPMVKQAFNTVVAVVKVAWEIIKAVIKISMEVILSTIVALLQLLTGDWRGAWQTMSKAGAEIWKAIVEMAKNIWSILGDYLKQSWQNIVDGFSAIFGPLAGIAGSIWNGIVNIVKTVVSGLGAFLTSIWTAIVTSAQVQWSIIATVAQTIWSAIVNVIVTVVTTLVSILATIWTTIVTVASTIWTTLVTVSQTIWTIIVTTITTIVTTLGTILSAIWTGIVTVATTIWTTLVTVAQTIWTLIVTTITTIISTLVTIITTVWTTIVSVTSTIWSSLVAIAQTIWSSVLSIISGIVGVIVAIVTGNWSLLRSSTASIMSGIAGLISAVWNSITSVISSAVSNAVSTAVSGFFNMLSSIGSAMHGIVSSVLSGMMSVVNSVRSGVSNALSAVRNFIGHFTQAGTDLIMGMVNGIKNAAINVVNAAKGVASSAINAVRSVLNSHS</Hsp_hseq> + <Hsp_midline>L G++A +S P+ VI +AA++A FV L+N++E R + AW AI S++ A++AV+ F+ DL+G+ QE++ A + VW+ I +V+T + + P+V+ A++ ++AVV +IK V+ ++V+L I A++Q++ GDW GAW+T+ IW+ I + Q +DG IF SIW+ + + VV IW I T+ ++ +W I N++ ++ TT T+W I TVAS IWT + T ++ T I I T + + T+ SA W I V I T+V + + LI I+ + T + +W I + S IW + A T W + + IS ++ I + + W+ +++S ++ ++ I WN+I S IS+A+ N ST +G+ N++S++ +A IVS +VR+G NA++A RNFI + G DLI G V G+K AA +++A G S AI+ + +L S</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>130.568493605019</Hsp_bit-score> + <Hsp_score>327</Hsp_score> + <Hsp_evalue>6.45396672852224e-28</Hsp_evalue> + <Hsp_query-from>384</Hsp_query-from> + <Hsp_query-to>1796</Hsp_query-to> + <Hsp_hit-from>844</Hsp_hit-from> + <Hsp_hit-to>1309</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>101</Hsp_identity> + <Hsp_positive>215</Hsp_positive> + <Hsp_gaps>79</Hsp_gaps> + <Hsp_align-len>508</Hsp_align-len> + <Hsp_qseq>FAKLVGIIAGISAPIWXXXXXXXXXXXXXXXXYNTNEEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVM----QMINGDWSG-------AWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMS-VLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKS--------------------NIETAWNNIKTSISNALNNIKSAAENAWNNIKSAI--STAIENIKSTVSNG---WNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEG</Hsp_qseq> + <Hsp_hseq>FSAIFGPLAGIAGSI-------------------------------WNGIVNIVKTVVSGLGAFLTSIWTAIVTSAQVQWSIIATVAQTIWSAIVNVIVTVVTTLVSILATIWTTIVTVASTIWTTLVTVSQTIWTIIVTTITTIVTTLGTILSAIWTGIVTVATTIWTTLVTVAQTIWTLIVTTITTIISTLVTIITTVWTTIVSVTSTIWSSLVAIAQTIWSSVLSIISGIVGVIVAIVTGNWSLLRSSTASIMSGIAGLISAVWNSITSVISSAVSNAVSTAVSGFFNMLSSIGSAMHGIVSSVLSGMMSVV--------NSVRSGVSNALSAVRNFIGHFTQAGTDLIMGMVNGIKNAAINVVNAAKGVASSAINAVRSVLNSHSPSRVMMGIGGDFGEGFKIGIDDKKKSVANIAGGLGSSAVKA---VKNAVNPTDVLSDVRSTLKNSNLKIPNIQGDIKNASASANANITHTHEYKTNPSQRVVTVQMDVNNDALTHIVNG</Hsp_hseq> + <Hsp_midline>F+ + G +AGI+ I W I + + T V + +F+ +W +V +I A+T+W+AI V+ TV+T L+ I+ T W I+ V +T+ + TV T +++ I ++ +++ W+G W TL VA TIW I + + I LV I T + S+ T+W +++A+ IW + + +S + + I+ + ++++ ++ + I+ + S +W +I++ + S V + + + ++ ++ SA I+ +V + ++ + + ++ +SNA ++ A T + G+ GIK AA K S+ + ++S + ++ K S++N + S+A A +K+A+ + + +++ST+ N N+ + NA + + + N ++ ++ + V D + V G</Hsp_midline> + </Hsp> + </Hit_hsps> + </Hit> + <Hit> + <Hit_num>4</Hit_num> + <Hit_id>gi|268611153|ref|ZP_06144880.1|</Hit_id> + <Hit_def>hypothetical protein RflaF_16865 [Ruminococcus flavefaciens FD-1]</Hit_def> + <Hit_accession>ZP_06144880</Hit_accession> + <Hit_len>1158</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>239.194774013712</Hsp_bit-score> + <Hsp_score>609</Hsp_score> + <Hsp_evalue>1.28842161409548e-60</Hsp_evalue> + <Hsp_query-from>78</Hsp_query-from> + <Hsp_query-to>1847</Hsp_query-to> + <Hsp_hit-from>440</Hsp_hit-from> + <Hsp_hit-to>1042</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>183</Hsp_identity> + <Hsp_positive>291</Hsp_positive> + <Hsp_gaps>85</Hsp_gaps> + <Hsp_align-len>639</Hsp_align-len> + <Hsp_qseq>NLVAGLGQKDADIKGLLSNLGETIQNFVRNVKNVVLTIWDNL-PLAPWQKW----LGLIAVAAGPFLMLLGXXXXXXXXXXXXXXXXXXXXNWFHLLNSGGSALSVMFAKLVGIIAGISAPIWXXXXXXXXXXXXXXXXYNTNEEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVW-----------NAISTVASNIWTAISTTVMSVLTTIWGYIQT---------------YLELIKTVWSA------------------AWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVS</Hsp_qseq> + <Hsp_hseq>NLGGQLTILKSQLQELAISFGEILMPAIRAIVSKIQGFIDKLNAMDPATKETIVKIALVAAALGPLLVVVGKTMVGVGKLMQLVANLPT-------IIAGAKAAFTSFGAAIG---GISAPVVAVIAVVAALVAAFVHLWRTNEDFRNKITAIWNQIKSIFDNFCQGIVDRVNAL--------GFDFKNISEVIKAVWDGL-------CKFLAPVFE-------GVFQQVANIFKAVTD----IILNILDIFVGIFTGDWSRVWDGIKGIFVAVWNFLKDTLKNYLNVLCNLFGTNLDEVKEFWVNVWTSIKNFFVNIWNGIKNFITGVVNAIKNFFTTIWTGIKNFFVGIWTAIYNSVAEKINLIKTVITVVWNAIHTAISMVLNAIWNVISTVWQTIYDFISPLLEAFRYLFETIFEAIHVIISRVMDWIHEKITTAWENIKAVVTIVLEAIKSVIETVWNAIHTAITTVMDAISNVISTVWNAISSFISGVVNAIWSVISSIWNSIKDHITNTLNAIHAVVSAVWNAISGFISGVLNTISSVVSSIWNGIKNTVTNILNTIKTTVSNIWDSVKNAVTQKITAIKDTIVNGFNAAVNFIKNLASQAFQWGADIINGIVNGIKNCIGKVADAVKGVAN</Hsp_hseq> + <Hsp_midline>NL L + ++ L + GE + +R + + + D L + P K + L+A A GP L+++G + ++ + + + + +G A F +G GISAP+ AVI V+AALVA FV L+ TNE+FR K+ A W IKS + +V V L + + I + + VW+ + L P+ + V V N+ K V D ++L I+ + + GDWS W+ +KG+ +W +K ++ ++ L +F T L +K W VW +I IW+ IK ++ + A+ I T I+ + +W N I TV + +W AI T + VL IW I T + L +T++ A AWE IKAV +L I ++ ++ I AI+ + I S +WNAI++F+SG+ I + S+ W IK I+N + I + + WN I IS LN I S + WN IK+ ++ + IK+TVSN W+++ + VT I + GF+ AVN +N S A G D+ING V G+K G++ DAV G +</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>141.354081730704</Hsp_bit-score> + <Hsp_score>355</Hsp_score> + <Hsp_evalue>3.65629455324605e-31</Hsp_evalue> + <Hsp_query-from>543</Hsp_query-from> + <Hsp_query-to>1856</Hsp_query-to> + <Hsp_hit-from>547</Hsp_hit-from> + <Hsp_hit-to>938</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>103</Hsp_identity> + <Hsp_positive>183</Hsp_positive> + <Hsp_gaps>52</Hsp_gaps> + <Hsp_align-len>441</Hsp_align-len> + <Hsp_qseq>ISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNL---VSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVSGAI</Hsp_qseq> + <Hsp_hseq>ISAPVVAVIAVVAALVAAFVHLWRTNEDF-RNKITAIWNQIKSIFDNFCQGIVDRVNA-------------------LGFDFKNISEVIKAV-------WDGLCKFLAPVFEGVFQQVANIFKAVTDIILNILDIFVGIFTGDWSRVWDGIKGIFVAVWNFLKDTLKNYLNVLCNLFGTNLDEVKEFWVNVWTSIKNFFVNIWNGIKNFITGVVNAI-----------KNFFTTIWTGIKNFF-------VGIWTAIYNSVAEKIN----LIKTVITVVWNAIHTAISMVLNAIWNVISTVWQTIYDFISPLLEAFRYLFETIFEAIHVIISRVMDWIHEKITTAWENIKAVVTIVLEAIKSVIETVWNAIHTAITTVMDAISNVISTVWNAISSFISGVVNAIWSVISSIWNSIKDHITNTLNAIHAVVSAVWNAISGFI</Hsp_hseq> + <Hsp_midline>IS V AV++ V L V W N++ R +WN I+++ + ++ V + K + +IKAV W G + L V +++ + ++ + D ++ I + W VW I + +W+++K T+ N + + + + ++ W VW +I NIW I + V+ I K ++ W IK F VG+ T ++ + + I+ +IKT + +WNAI T +S + I ST W+ I IS ++ + ET + I IS ++ I AW NIK+ ++ +E IKS + WN + ++TV +A ++S V + ++ N I + IS + I + A ++ AV A+SG I</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>140.198483002952</Hsp_bit-score> + <Hsp_score>352</Hsp_score> + <Hsp_evalue>8.14537447802119e-31</Hsp_evalue> + <Hsp_query-from>522</Hsp_query-from> + <Hsp_query-to>1844</Hsp_query-to> + <Hsp_hit-from>722</Hsp_hit-from> + <Hsp_hit-to>1121</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>116</Hsp_identity> + <Hsp_positive>190</Hsp_positive> + <Hsp_gaps>77</Hsp_gaps> + <Hsp_align-len>459</Hsp_align-len> + <Hsp_qseq>WEAIKSAISTAVEAVVSFVMDLW--------GQMVAWWN---ENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSN--GWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLI-----NGFVEGVKGAAGRLIDAVGGAV</Hsp_qseq> + <Hsp_hseq>WNGIKNFITGVVNAIKNFFTTIWTGIKNFFVGIWTAIYNSVAEKINLIKTVITVVWNAIHTAISMVLNAIWNVISTVWQTIYDFISPLLEAFRYLFETIFEAIHVIISRVMDWIHEKITTAWENIKAVVTIVLEAIKSVIETVWNAI----HTAIT-------TVMDAISNVISTVWNAISSFISGVVNAIWSVISSIWNSIKDHITNTLNAIHAVVSAVWNAIS-----------GFISGVLNTISSVVSSIWNGIKNTVTNILNTIKTTVSNIWDSVKNAVTQKITAIKDTIVNGFNAAVNF-------IKNLASQAFQWGADII---------------NGIVNGIKNCIGKVADAVKGVANKIKSFLHFSVPD-EGTLADFESW--------------MPDFMQGLAQGINKSKKYVEKAISGVADAMTIAMNSDFNVDMSGVTGAMVGAGGTTV</Hsp_hseq> + <Hsp_midline>W IK+ I+ V A+ +F +W G A +N E LI+ VWNAI T + V+ A+ ++ T W I ++ +L + + +T + + II VM I+ + AWE +K V + E IKS+++ + + T + TV I V+ +W+ I + +S + A+W +I +I SI+ NAI V S +W AIS G+I L I +V S+ W IK IL TI V+ +D +K A++ IK +NA F IK AS A++W I N I I N + + A + N IKS + ++ + + T+++ W + G +N ++ ++ AIS D + + F + G G ++ A G V</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>115.160510568324</Hsp_bit-score> + <Hsp_score>287</Hsp_score> + <Hsp_evalue>2.80602663410135e-23</Hsp_evalue> + <Hsp_query-from>501</Hsp_query-from> + <Hsp_query-to>1694</Hsp_query-to> + <Hsp_hit-from>770</Hsp_hit-from> + <Hsp_hit-to>1144</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>100</Hsp_identity> + <Hsp_positive>176</Hsp_positive> + <Hsp_gaps>39</Hsp_gaps> + <Hsp_align-len>406</Hsp_align-len> + <Hsp_qseq>RTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWET----LKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENI-KSTVSNGWNNLVSTV---TNAGPRIVS</Hsp_qseq> + <Hsp_hseq>KTVITVVWNAIHTAISMVLNAIWNVISTVWQTIYDFISPLLEAFRYLFETIFEAIHVIISRVMDWIHEKITTAWENIKAVVTIVLEAIKSVIETVWNAIHTAITTVMDAISNVISTVWNAISSFISGVVNAIWSVISSIWNSIKDHITNTLNAIHAVVSAVWNAISGFISGVL--------NTISSVVSSIWNGIKNTVTNI-------LNTIKTTVSNIWDSVKNAVTQKITAI-------KDTIVNGFNAAVNFIKNLASQAFQWGADIINGIVNGIKNCIGKVADAVK----GVANKIKSFLHFSVPDEGTLAD-----FESWMPDFMQGLAQGINKSKKYVEKAISGVADAMTIAMNSDFNVDMSGVTGAMVGAGGTTVVNNYNNDNSRTVNQTNNSPKSLS</Hsp_hseq> + <Hsp_midline>+T + W AI +AIS + A+ + + +W + + + E R ET++ AI ++ VM + + TAW+ I AVVT VL IK+V++T + I VM I+ S W + GV IW I S+ D + A + ++W+ + G I V+ T+S+ ++++W I+N +T+I N I T SNIW ++ V +T I + I ++AA IK + + ++ G + IK I + +K + N I +FL T A ++ + + M + I + ++ +IS + + A + +N S ++ A+ +TV N +NN S TN P+ +S</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>5</Hsp_num> + <Hsp_bit-score>90.8929372855311</Hsp_bit-score> + <Hsp_score>224</Hsp_score> + <Hsp_evalue>5.66707902872949e-16</Hsp_evalue> + <Hsp_query-from>492</Hsp_query-from> + <Hsp_query-to>1148</Hsp_query-to> + <Hsp_hit-from>811</Hsp_hit-from> + <Hsp_hit-to>1044</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>67</Hsp_identity> + <Hsp_positive>106</Hsp_positive> + <Hsp_gaps>29</Hsp_gaps> + <Hsp_align-len>241</Hsp_align-len> + <Hsp_qseq>EEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDT-----------GLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWD-----------WIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNI</Hsp_qseq> + <Hsp_hseq>EAFRYLFETIFEAIHVIISRVMDWIHEKITTAWENIKAVVTIVLEAIKSVIETVWNAIHTAITTVMDAISNVISTVWNAISSFISGVVNAIWSVISSIWNSIKDHITNTLNAIHAVVSAVWNAISGFISGVLNTISSVVSSIWNGIKNTV-------TNILNTIKTTVSNIWDSVKNAVTQKITAIKDTIVNGFNAAVNFIKNLASQAFQWGADIINGIVNGIKNCIGKVADAVKGVANKI</Hsp_hseq> + <Hsp_midline>E FR + +EAI IS ++ + + W + A E I+ ETVWNAI T + TVM A+ ++ T W+ I + ++ V+N I +V+ + L + ++ AV I+G SG T+ V +IW GIK+ V I T + +IWD+V + + I D +IK S A +II I+ I+ V +A+ VA+ I</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>6</Hsp_num> + <Hsp_bit-score>51.9877801178785</Hsp_bit-score> + <Hsp_score>123</Hsp_score> + <Hsp_evalue>0.000291728300853117</Hsp_evalue> + <Hsp_query-from>1158</Hsp_query-from> + <Hsp_query-to>1883</Hsp_query-to> + <Hsp_hit-from>547</Hsp_hit-from> + <Hsp_hit-to>775</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>50</Hsp_identity> + <Hsp_positive>102</Hsp_positive> + <Hsp_gaps>35</Hsp_gaps> + <Hsp_align-len>253</Hsp_align-len> + <Hsp_qseq>ISTTVMSVLTTIWGYIQTYLELIKT------VWSAAWEIIKAVFAAILLTIVGLVTG-NFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTI----KSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVSGAIDWAKGLLGI</Hsp_qseq> + <Hsp_hseq>ISAPVVAVIAVVAALVAAFVHLWRTNEDFRNKITAIWNQIKSIFDNFCQGIVDRVNALGFDF-----KNISEVIKA----VWDGLCKFLAPVFEGVFQQVANIFKAVTDIILNILDIFVGIFTGDWSRVWDGIKGIFVAVWNFLKDTLKNYLNVLCNLFGTNLDEVKEFWVNVW---------------TSIKNFFVNIWNGIKNFITGVVNAIKNFFTTIWTGIKNFFVGIWTAIYNSVAEKINLIKTVITV</Hsp_hseq> + <Hsp_midline>IS V++V+ + + ++ L +T +A W IK++F IV V FD N E+IK +W+ + FL+ ++EG+ + ++ + I N++ + W+ IK N +K +N N + + T ++ +K N W ++++ F N N +NFI+ ++ + G+K + A+ +V+ I+ K ++ +</Hsp_midline> + </Hsp> + </Hit_hsps> + </Hit> + <Hit> + <Hit_num>5</Hit_num> + <Hit_id>gi|268610688|ref|ZP_06144415.1|</Hit_id> + <Hit_def>hypothetical protein RflaF_14482 [Ruminococcus flavefaciens FD-1]</Hit_def> + <Hit_accession>ZP_06144415</Hit_accession> + <Hit_len>1444</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>234.572379102704</Hsp_bit-score> + <Hsp_score>597</Hsp_score> + <Hsp_evalue>3.17349283264528e-59</Hsp_evalue> + <Hsp_query-from>78</Hsp_query-from> + <Hsp_query-to>1847</Hsp_query-to> + <Hsp_hit-from>440</Hsp_hit-from> + <Hsp_hit-to>1042</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>185</Hsp_identity> + <Hsp_positive>294</Hsp_positive> + <Hsp_gaps>85</Hsp_gaps> + <Hsp_align-len>639</Hsp_align-len> + <Hsp_qseq>NLVAGLGQKDADIKGLLSNLGETIQNFVRNVKNVVLTIWDNL-PLAPWQKW----LGLIAVAAGPFLMLLGXXXXXXXXXXXXXXXXXXXXNWFHLLNSGGSALSVMFAKLVGIIAGISAPIWXXXXXXXXXXXXXXXXYNTNEEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVS-------NAITAVWEIIQN----IMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQT---------------YLELIKTVWSA------------------AWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVS</Hsp_qseq> + <Hsp_hseq>NLGGQLTILKSQLQELAISFGEILMPAIRSIVSRIQGLIDKFNALSPATKETIVKVALVAATLGPLLVVVGKTMVGVGKLMQLVA------NLPTIIASAKAA----FTSFGAAIGGISAPVVAVIAVVAALVAAFVHLWRTNEDFRNKITAIWEQIKSIFSGFCQGIVDRINALGFDF---------------KNITEVIKAVWDGLCKFLKPIFEGQFQ-------QIANIFKAVTD----IILSVLDIFVGIFTGDWSRVWDGIKGIFVAVWNFIKDTLKNALNMICGIFGTDLGEVKEFWVGVWTSIKNFFVNIWNGIKNFISSVLGGIKNFFTTIWTGIKNFFVGIWTAIYSSVSEKINLIKTVITVVWNAIHTAISTVLNAIWSVITTVWQTIYDFISPLLEAFRYLFETIFEAIHVIISRVMDWIHDKIVERWETIKAIVTVVLEAIKSVIETVWNAIHTAISTVMDAIHNVVSTVWNAISGFISGVVNAIWSVISSIWNSIKDHITNTLNAIHAVVSAVWNAISGFISGVLNTISSVVSSIWNGIKNTVTNILNAIKTTVSNIWDSVKNAVTQKITAIKDTIVNGFNAAVNFIKNLGSQAFQWGADIINNIVSGIKNCIGKVADAVKGVAN</Hsp_hseq> + <Hsp_midline>NL L + ++ L + GE + +R++ + + + D L+P K + L+A GP L+++G + ++ + + N ++ S +A F I GISAP+ AVI V+AALVA FV L+ TNE+FR K+ A WE IKS S + +V + L + + I+ V + + L PI + + + N+ K V D ++L ++ + + GDWS W+ +KG+ +W IK ++ A++ + IF T L +K W VW +I IW+ IK +S N T +W I+N I T+I ++ N I TV + +W AI T + +VL IW I T + L +T++ A WE IKA+ +L I ++ ++ I AIS + I S +WNAI+ F+SG+ I + S+ W IK I+N + I + + WN I IS LN I S + WN IK+ ++ + IK+TVSN W+++ + VT I + GF+ AVN +N S A G D+IN V G+K G++ DAV G +</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>167.932852469002</Hsp_bit-score> + <Hsp_score>424</Hsp_score> + <Hsp_evalue>3.64782449590402e-39</Hsp_evalue> + <Hsp_query-from>501</Hsp_query-from> + <Hsp_query-to>1856</Hsp_query-to> + <Hsp_hit-from>770</Hsp_hit-from> + <Hsp_hit-to>1245</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>121</Hsp_identity> + <Hsp_positive>216</Hsp_positive> + <Hsp_gaps>54</Hsp_gaps> + <Hsp_align-len>491</Hsp_align-len> + <Hsp_qseq>RTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWET----LKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLT----TIWGYIQTYLELIKTVWSAAW----EIIKAVFAAI---LLTIVGLVTGNFDLIKQ------------AISNAW---------EIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGW---NNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVSGAI</Hsp_qseq> + <Hsp_hseq>KTVITVVWNAIHTAISTVLNAIWSVITTVWQTIYDFISPLLEAFRYLFETIFEAIHVIISRVMDWIHDKIVERWETIKAIVTVVLEAIKSVIETVWNAIHTAISTVMDAIHNVVSTVWNAISGFISGVVNAIWSVISSIWNSIKDHITNTLNAIHAVVSAVWNAISGFISGVL--------NTISSVVSSIWNGIKNTVTNI-------LNAIKTTVSNIWDSVKNAVTQKITAIKDTIVNGFNAAVNFIKNLGSQAFQWGADIINNIVSGIKNCIGKVADAVKGVANKIKSFLHFSVPDEGPLADFESWMPDFMQGLADGINANTSVVNDAVNSFAGGLAEKISSVIQNALSNVVTSVQGFMTQVFDTVKTVWTNANAAIDATMSQISSGITSGWKTIVSTIKTALENIRNVITTTWKAVSSVISAALDGIKKIVTVVWTALKNLIKTGQLDIKSVVTTTWEAVSGVVRTAVNAIKSVVQAVWDAMPDTV</Hsp_hseq> + <Hsp_midline>+T + W AI +AIST + A+ S + +W + + + E R ET++ AI ++ VM + + W+ I A+VT VL IK+V++T + I VM I+ S W + GV IW I S+ D + A + ++W+ + G I V+ T+S+ ++++W I+N +T+I NAI T SNIW ++ V +T TI + IK + S A+ +II + + I + + V G + IK A +W + I TS + +A+ +F G+ E I + A + T++ MT + ++T W N +I ++ I S + W I S I TA+ENI++ ++ W ++++S + +IV+ V T N + + I + ++ + ++G V A ++ AV A+ +</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>161.769659254324</Hsp_bit-score> + <Hsp_score>408</Hsp_score> + <Hsp_evalue>2.61420693292496e-37</Hsp_evalue> + <Hsp_query-from>492</Hsp_query-from> + <Hsp_query-to>1832</Hsp_query-to> + <Hsp_hit-from>811</Hsp_hit-from> + <Hsp_hit-to>1322</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>123</Hsp_identity> + <Hsp_positive>220</Hsp_positive> + <Hsp_gaps>75</Hsp_gaps> + <Hsp_align-len>517</Hsp_align-len> + <Hsp_qseq>EEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDT-----------GLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAI--------------------------DGLVQIFQTGLAFLKSIWDTV--WGT---------IMAVVGPIWDWIKTTVSNAITAV----------------W--EIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMS----VLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAV</Hsp_qseq> + <Hsp_hseq>EAFRYLFETIFEAIHVIISRVMDWIHDKIVERWETIKAIVTVVLEAIKSVIETVWNAIHTAISTVMDAIHNVVSTVWNAISGFISGVVNAIWSVISSIWNSIKDHITNTLNAIHAVVSAVWNAISGFISGVLNTISSVVSSIWNGIKNTVTNILNAIKTTVSNIWDSVKNAVTQKITAIKDTIVNGFNAAVNFIKNLGSQAFQWGADIINNIVSGIKNCIGKVADAVKG-VANKIKSFLHFSVPDEGPLADFESWMPDFMQGLADGINANTSVVNDAVNSFAGGLAEKISSVIQNALSNVVTSVQGFMTQVFDTVKTVWTNA----NAAIDATMSQISSGITSGWKTIVSTIKTALENIRNVITTTWKAVSSVISAALDGIKKIVTVVWTALKNLIKTGQLDIKSVVTTTWEAVSGVVRTAVNAIKSVVQAVWDAMPDTVRSAMNRVKEAVLSIWDGIKSGIGDRLGGVRDAVVNAMNAVYKAVKDKVNSSWSWGRDLMQNLINGITYMLGSLINTV</Hsp_hseq> + <Hsp_midline>E FR + +EAI IS ++ + +++ W + A E I+ ETVWNAI T + TVM A+ +V T W+ I ++ V+N I +V+ + L + ++ AV I+G SG T+ V +IW GIK+ V + D +V F + F+K++ WG I +G + D +K V+N I + W + +Q + I V +A+++ A + IS+ + + V+T++ G++ + +KTVW+ A A A + I +T + I I A E I+ + W A+++ +S +GIK + W +K I IKS + T W + + A+N IKS + W+ + + +A+ +K V + W+ + S + + + AV + A ++ ++++ S G DL+ + G+ G LI+ V</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>123.249701662589</Hsp_bit-score> + <Hsp_score>308</Hsp_score> + <Hsp_evalue>1.03039235764918e-25</Hsp_evalue> + <Hsp_query-from>510</Hsp_query-from> + <Hsp_query-to>1859</Hsp_query-to> + <Hsp_hit-from>905</Hsp_hit-from> + <Hsp_hit-to>1377</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>108</Hsp_identity> + <Hsp_positive>204</Hsp_positive> + <Hsp_gaps>63</Hsp_gaps> + <Hsp_align-len>493</Hsp_align-len> + <Hsp_qseq>VQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAV--------MQMINGDWSG-------AWETLKGVAGTIWEGIKSLVQVAI--DGLVQIFQTGLA-FLKSIWD-------TVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVT------------GNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLIN------GFVEGVKGAAGRLIDAVGGAVSGAID</Hsp_qseq> + <Hsp_hseq>ISSIWNSIKDHITNTLNAIHAVVSAVWNAISGFISGVLNTISSVVSSIWNGIKNTVTNILNAIKTTVSNIWDSVKNAVTQKITAIKDTIVNGFNAAVNFIKNLGSQAFQWGADIINNIVSGIKNCIGKVADAVKGVANKI----KSFLHFSVPDEGPLADFESWMPDFMQGLADGINANTSVVNDAVNSFAGGLAEKISSVIQNALSNVVTSVQGFMTQVFDTVKTVWTNANAAIDATMSQISSGITSGWKTIVSTIKTALENIRNVITTTWKAVSSVISAALDGIKKIVTVVWTALKNLIKTGQLD-IKSVVTTTWEAVSGVVRTAVNA-----------IKSVVQAVWDAMPDTVRSAMNRVKEAVLSIWDGIKSGIGDRLGGVRDAVVNAMNAVYKAVKDKVNSSWSWGRDLMQNLINGITYMLGSLINTVA----DVARSIWEYLHFSVPEKGALTDVEEWMPDFMKGLAKGINKSKKYVEAAVSGVAD</Hsp_hseq> + <Hsp_midline>+ + W +IK I+ + A+ + V +W + + + I ++WN I+ V ++ A+ V WD + VT + IK + G + IK + +IN SG + +KGVA I KS + ++ +G + F++ + F++ + D V + + G + + I + + NA++ V +Q MT + T TVW + + IS+ + S TI I+T LE I+ V + W+ + +V +A L I +VT G D IK ++ WE + NA IK+ W+ + T+ + M +K + + W+ IK+ I + L ++ A NA N + A+ + + S + NL++ +T +++ V + + ++ ++ G L + F++G+ + V AVSG D</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>5</Hsp_num> + <Hsp_bit-score>71.6329584896635</Hsp_bit-score> + <Hsp_score>174</Hsp_score> + <Hsp_evalue>3.55787431696712e-10</Hsp_evalue> + <Hsp_query-from>486</Hsp_query-from> + <Hsp_query-to>1343</Hsp_query-to> + <Hsp_hit-from>1138</Hsp_hit-from> + <Hsp_hit-to>1400</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>60</Hsp_identity> + <Hsp_positive>128</Hsp_positive> + <Hsp_gaps>35</Hsp_gaps> + <Hsp_align-len>292</Hsp_align-len> + <Hsp_qseq>TNEEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTV--MSVLTTIWGYIQTYLELIKTVWSAAWEIIKA----VFAAILLTIVGLVTGNFDLIKQAISN</Hsp_qseq> + <Hsp_hseq>TMSQISSGITSGWKTIVSTIKTALENIRNVITTTWKAVSSVISAALDGIKKIVTVVWTALKNLIKTGQLDIKSVVTTTWEAVSGVVRTAVNAIKSVV-----------QAVWDAMPDTVRSAMNRVKEAVLSIWDGIKSGIGDRLGGVRDAVVNAM-------NAVYKAVKDKVNSSWSWGR-----------DLMQNLINGITYMLGSLINTVADVARSIWEYLHFSVPEKGALTDVEEWMPDFMKGLAKGINKSKKYVEAAVSGVADAMTLTMQSGLNVDMDGISGAMMN</Hsp_hseq> + <Hsp_midline>T + + + + W+ I S I TA+E + + + W + + + + I++ VW A++ +++T + +V T W+ + VV T +N IK+VV +AV + A +K +IW+GIKS + + G+ + + V+ + V W W + +++QN++ I ++ N ++ VA +IW + +V LT + ++ +++ + + + + ++A V A+ LT+ + + D I A+ N</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>6</Hsp_num> + <Hsp_bit-score>53.9137779974652</Hsp_bit-score> + <Hsp_score>128</Hsp_score> + <Hsp_evalue>7.67706873813937e-05</Hsp_evalue> + <Hsp_query-from>894</Hsp_query-from> + <Hsp_query-to>1883</Hsp_query-to> + <Hsp_hit-from>467</Hsp_hit-from> + <Hsp_hit-to>775</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>73</Hsp_identity> + <Hsp_positive>133</Hsp_positive> + <Hsp_gaps>43</Hsp_gaps> + <Hsp_align-len>341</Hsp_align-len> + <Hsp_qseq>IKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKT------VWSAAWEIIKAVFAAILLTIVGLVTG-NFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTI----KSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVSGAIDWAKGLLGI</Hsp_qseq> + <Hsp_hseq>IRSIVS-RIQGLIDKFNALSPATKETIVKV-ALVAATLGPLLVVVGKTMVG-VGKLMQLVANLPTIIASA-----KAAFTSFGAAIGGISAPVVAVIAVVAALVAAFVHLWRTNEDFRNKITAIWEQIKSIFSGFCQGIVDRINALGFDF-----KNITEVIKA----VWDGLCKFLKPIFEGQFQQIANIFKAVTDIILSVLDIFVGIFTGDWSRVWDGIKGIFVAVWNFIKDTLKNALNMICGIFGTDLGEVKEFWVGVW---------------TSIKNFFVNIWNGIKNFISSVLGGIKNFFTTIWTGIKNFFVGIWTAIYSSVSEKINLIKTVITV</Hsp_hseq> + <Hsp_midline>I+S+V I GL+ F K V + A +GP+ + T+ + + +++ N+ T I + A T IS V++V+ + + ++ L +T +A WE IK++F+ IV + FD N E+IK +W+ + FL I+EG + ++ + I +V+ + W+ IK N IK +NA N I T + +K W ++++ F N N +NFIS+ + + G+K + A+ +VS I+ K ++ +</Hsp_midline> + </Hsp> + </Hit_hsps> + </Hit> + <Hit> + <Hit_num>6</Hit_num> + <Hit_id>gi|153811333|ref|ZP_01964001.1|</Hit_id> + <Hit_def>hypothetical protein RUMOBE_01725 [Ruminococcus obeum ATCC 29174] >gi|149832460|gb|EDM87544.1| hypothetical protein RUMOBE_01725 [Ruminococcus obeum ATCC 29174]</Hit_def> + <Hit_accession>ZP_01964001</Hit_accession> + <Hit_len>1228</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>219.934795217844</Hsp_bit-score> + <Hsp_score>559</Hsp_score> + <Hsp_evalue>8.08889755547188e-55</Hsp_evalue> + <Hsp_query-from>108</Hsp_query-from> + <Hsp_query-to>1847</Hsp_query-to> + <Hsp_hit-from>493</Hsp_hit-from> + <Hsp_hit-to>1073</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>176</Hsp_identity> + <Hsp_positive>285</Hsp_positive> + <Hsp_gaps>81</Hsp_gaps> + <Hsp_align-len>621</Hsp_align-len> + <Hsp_qseq>ADIKGLLSNLGETIQNFVRNVKNVVLTIWDNL-PLAPWQKW----LGLIAVAAGPFLMLLGXXXXXXXXXXXXXXXXXXXXNWFHLLNSGGSALSVMFAKLVGIIAGISAPIWXXXXXXXXXXXXXXXXYNTNEEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKT-------TVSNAITAVWE-IIQNI---MTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELI----KTVWS-------AAWEIIK-AVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIW------------EGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTS-ISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVS</Hsp_qseq> + <Hsp_hseq>SQLQELAISFGEILMPKIRDIVTHIQNFVDKLNAMDEGQKETILRIGMFVAALAPMLMGLGKVITFSANVSRALGTLSAG-----LVKAGG--FSGVFTKALGLI---TSPAAIVVGVIAAITAVIIHLWNTNEDFRNTITAIWQKIKDAFTTFAAGI---------------SERLSALGITFSDVTSAIKTIWDGFCNLLAPVLEAAFSTIAIALQTAFNVI-----------LGIWDVFSAVFSGDWSGAWEAIKGIFSSIWDGLKEYFSTIIGAVKGVADVFLGWFGTNWETVWNGVKTFFEGIWNGISSFFEGIWNGISTFCTTVWNGIVTNVTAFCTTVHDTISTIFNAVKDVVSNVWETIKNVVQVAIMFIVEVVKAAFELITVPFRFIWENCRDTIISVWETIKSAVQTAINFVKDNIITPVMNAISATITTVWNAIQTTFTTVINAIKSAVQTAWNFMKDNVVTPVMNAISTTISTVWNTIKTTFTTVINAIKSAVQTAWNFMKNSVITPVMNGIKTVITTVWNAIKTAVQTVVNAIKTTVQTVFNAVKTTVTT----IWNAIKTGTSTAWNAVKTAVTTPINAAKSAVTSAINGIKSTISSVWNSVKSATS</Hsp_hseq> + <Hsp_midline>+ ++ L + GE + +R++ + D L + QK +G+ A P LM LG + + V +S L+ +GG S +F K +G+I ++P V+GVIAA+ A + L+NTNE+FR + A W+ IK A +T + +E + T V +AI+T+ + L P+++ A+ I + T NVI LGI + +GDWSGAWE +KG+ +IW+G+K I + + L + + W+TVW + IW+ I + +S T VW I+ N+ T++ T T++NA+ V SN+W I V + I ++ ELI + +W + WE IK AV AI ++T + I I+ W I+T + + NAI + + W I T ST W IKTT + V+ IKS ++TAWN +K S I+ +N IK+ WN IK+A+ T + IK+TV +N + +TVT I +A++TG A NA + ++ I+ + + G+K + ++V A S</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>195.667221935051</Hsp_bit-score> + <Hsp_score>496</Hsp_score> + <Hsp_evalue>1.63364171761813e-47</Hsp_evalue> + <Hsp_query-from>519</Hsp_query-from> + <Hsp_query-to>1760</Hsp_query-to> + <Hsp_hit-from>709</Hsp_hit-from> + <Hsp_hit-to>1099</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>127</Hsp_identity> + <Hsp_positive>197</Hsp_positive> + <Hsp_gaps>51</Hsp_gaps> + <Hsp_align-len>428</Hsp_align-len> + <Hsp_qseq>AWEAIKSAISTAVEAVVSFVMDLWGQM-------VAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWE-IIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQT-----YLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKT-SEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAIS</Hsp_qseq> + <Hsp_hseq>AWEAIKGIFSSIWDGLKEYFSTIIGAVKGVADVFLGWFGTNWE-------TVWNGVKTFFEGIWNGISSFFEGIWNGISTFCTTVWNGIVTNVTAFCTTVHDTISTIFNAV-----------KDVVSNVWETIKNVVQVAIMFIVEVVKAAFELITVPFRFIWENCRDTIISVWETIKSAVQTAINFVKDNIITPVMNAISATITTVWNAIQTT----FTTVINAIKSAVQTAWNFMKDNVVTPVMNAISTTISTVWNTIKTTFTTVI-----------NAIKSAVQTAWNFMKNSVITPVMNGIKTVITTVWNAIKTAVQTVVNAIKTTVQTVFNAVKTTVTTIWNAIKTGTSTAWNAVKTAVTTPINAAKSAVTSAINGIKSTISSVWNSVKSATSSTWNAIKRAITT----PINAAKTAVGNAIS</Hsp_hseq> + <Hsp_midline>AWEAIK S+ + + + + G + + W+ N E TVWN ++T E + + + W+ I TTV N I T V V I + + K V +WE IK++VQVAI +V++ + + + +W + +W+ IK+ V AI V + II +M +I T TVWNAI T +T + + S + T W +++ + I T S W IK F ++ + IK A+ AW +K + + N I T ++ +W IKTA T IKTT+ V +K+ + T WN IKT S A N +K+A N KSA+++AI IKST+S+ WN++ S ++ I A+ T +NAA+ + NAIS</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>169.473650772671</Hsp_bit-score> + <Hsp_score>428</Hsp_score> + <Hsp_evalue>1.25373984602686e-39</Hsp_evalue> + <Hsp_query-from>498</Hsp_query-from> + <Hsp_query-to>1640</Hsp_query-to> + <Hsp_hit-from>746</Hsp_hit-from> + <Hsp_hit-to>1096</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>115</Hsp_identity> + <Hsp_positive>178</Hsp_positive> + <Hsp_gaps>50</Hsp_gaps> + <Hsp_align-len>391</Hsp_align-len> + <Hsp_qseq>FRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLK-SIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWD--------TVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIK-TVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSN</Hsp_qseq> + <Hsp_hseq>FGTNWETVWNGVKTFFEGIWNGISSFFEGIWNGISTF-----------CTTVWNGIVTNVTAFCTTVHDTISTIFNAVKDVVSNVWETIKNVVQVAIMFIVEVVKAAFELITVPFRFIWENCRDTIISVWETIKSAVQTAIN-----------FVKDNIITPVMNAISATITTVWNAIQTTFTTVINA-------IKSAVQTAWNFMKDNVVTPVMNAISTTISTVWNTIKTTFTTVINAIKSAVQTAWNFMKNSVITPVMNGIKTVITTVWNAIKTAVQTVVNAIKTTVQTVFNAVKTTVTTIWNA-----------IKTGTSTAWNAVKTAVTTPINAAKSAVTSAINGIKSTISSVWNSVKSATSSTWNAIKRAITTPINAAKTAVGN</Hsp_hseq> + <Hsp_midline>F T + W +K+ + SF +W + + TVWN I T V T + + T ++ + VV+ V IK VV + ++ ++KA ++I + WE + ++WE IKS VQ AI+ F+K +I V I A + +W+ I+TT + I A I +++QT W+ V NAIST S +W I TT +V+ I +QT +K +V + IK V + I V + IK + + +KT + IWNA IKT STAW +KT ++ + KS + +A N IK++IS+ N++KSA + WN IK AI+T I K+ V N</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>118.242107175663</Hsp_bit-score> + <Hsp_score>295</Hsp_score> + <Hsp_evalue>3.31465838308759e-24</Hsp_evalue> + <Hsp_query-from>492</Hsp_query-from> + <Hsp_query-to>1256</Hsp_query-to> + <Hsp_hit-from>854</Hsp_hit-from> + <Hsp_hit-to>1111</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>71</Hsp_identity> + <Hsp_positive>119</Hsp_positive> + <Hsp_gaps>23</Hsp_gaps> + <Hsp_align-len>268</Hsp_align-len> + <Hsp_qseq>EEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILA-VVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKG------------VAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEI</Hsp_qseq> + <Hsp_hseq>ENCRDTIISVWETIKSAVQTAINFVKDNII----------TPVMNAISATITTVWNAIQTTFTTVINAIKSAVQTAWNFMKDNVVTPVMNAISTTISTVWNTIKTTFTTVINAIKSAVQTAWNFMKNSVITPVMNGIKTVITTVWNAIKTAVQTVVNAIKTTVQTVFNAVKTTVTTIWNAIKTGTSTAWNAVKTAVTTPINAAKSAVTSAINGIKSTISSVWNSVKSATSSTWNAIKRAITTPINAAKTAVGNAISAIRSKFNFSWSL</Hsp_hseq> + <Hsp_midline>E R + + WE IKSA+ TA+ V ++ I T TVWNAI+T TV+ A+ VQTAW+ + VVT V+N I T + T + V+ I AW +K V T+W IK+ VQ ++ + QT +K+ T+W I W+ +KT V+ I A + + + I++T +VWN++ + S+ W AI + + + + + I++ ++ +W +</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>5</Hsp_num> + <Hsp_bit-score>116.316109296076</Hsp_bit-score> + <Hsp_score>290</Hsp_score> + <Hsp_evalue>1.25956884194974e-23</Hsp_evalue> + <Hsp_query-from>510</Hsp_query-from> + <Hsp_query-to>1385</Hsp_query-to> + <Hsp_hit-from>816</Hsp_hit-from> + <Hsp_hit-to>1110</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>83</Hsp_identity> + <Hsp_positive>132</Hsp_positive> + <Hsp_gaps>25</Hsp_gaps> + <Hsp_align-len>306</Hsp_align-len> + <Hsp_qseq>VQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVET------------VMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVL-GIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQ-IFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWN</Hsp_qseq> + <Hsp_hseq>VSNVWETIKNVVQVAIMFIVEVVKAAFELITVPFRFIWENCRDTIISVWETIKSAVQTAINFVKDNIITPVMNAISATITTVWNAIQTTFTTVINAIKSAVQTAWNFMKDNVVTPVMNAISTTISTVWNTIKTTFTTVINAIKSAVQTAWNFMKNSVITPVMNGIKTVITTVWNAIKTAVQTVVNAIKTTVQTVFNAVKTTVTTIWNAIKTGTSTAWNAVKTAVTTPINAAKSAVTSAINGIKSTISSVWNSVKSATSSTWNAIKRA-----------ITTPINAAKTAVGNAISAIRSKFNFSWS</Hsp_hseq> + <Hsp_midline>V WE IK+ + A+ +V V + + + E R T +VW I++ V+T VM A+ + T W+ I TTV+N IK+ V T + ++ VM I+ S W T+K T+ IKS VQ A + + + + +K++ TVW I V + + IKTTV AV + I +I+T T WNA+ T + A + V S + I I + +K+ S+ W IK +T + K A+ NA I++K + W+</Hsp_midline> + </Hsp> + </Hit_hsps> + </Hit> + <Hit> + <Hit_num>7</Hit_num> + <Hit_id>gi|262113750|emb|CAR95417.1|</Hit_id> + <Hit_def>hypothetical protein [Streptococcus phage phi-m46.1]</Hit_def> + <Hit_accession>CAR95417</Hit_accession> + <Hit_len>952</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>218.779196490092</Hsp_bit-score> + <Hsp_score>556</Hsp_score> + <Hsp_evalue>1.80201837527491e-54</Hsp_evalue> + <Hsp_query-from>384</Hsp_query-from> + <Hsp_query-to>1241</Hsp_query-to> + <Hsp_hit-from>540</Hsp_hit-from> + <Hsp_hit-to>818</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>110</Hsp_identity> + <Hsp_positive>166</Hsp_positive> + <Hsp_gaps>7</Hsp_gaps> + <Hsp_align-len>286</Hsp_align-len> + <Hsp_qseq>FAKLVGIIAGISAPIWXXXXXXXXXXXXXXXXYNTNEEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWS</Hsp_qseq> + <Hsp_hseq>FLPIVGIIVGIVAAI-------TLLIVGLKELWTNHEGFRTAVTEIWNSIYAFLSMIIQQISSFVMSVWGTLTTWWTENQQLILNAATTVWNAITTVIQTVMTILGPLIQASWENIKLIITAAWEMIKIVVETAINVVLGIIKAVMQVITGDWTGAWETIKQVLSMAWEGIKSLISLALNFIAQYISTAWTGIKNTISNVLSAISSVISSIWTAIQSTISSVLSAIGSTVSTIWNGISNTVSNILNGISNTVSSVWNGVKNTISNAINGARDAVSNAINAIKNLFN</Hsp_hseq> + <Hsp_midline>F +VGII GI A I L+ G L+ +E FRT V W +I + +S ++ + SFVM +WG + WW ENQ+LI A TVWNAI TV++TVMT L P++Q +W+ I ++T +IK VV+T + VVLGIIKAVMQ+I GDW+GAWET+K V WEGIKSL+ +A++ + Q T +K+ V I +V+ IW I++T+S+ ++A+ + I I T + N IS S++W + T+ + + + + IK +++</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>171.784848228175</Hsp_bit-score> + <Hsp_score>434</Hsp_score> + <Hsp_evalue>2.526199638793e-40</Hsp_evalue> + <Hsp_query-from>657</Hsp_query-from> + <Hsp_query-to>1871</Hsp_query-to> + <Hsp_hit-from>460</Hsp_hit-from> + <Hsp_hit-to>858</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>122</Hsp_identity> + <Hsp_positive>198</Hsp_positive> + <Hsp_gaps>18</Hsp_gaps> + <Hsp_align-len>411</Hsp_align-len> + <Hsp_qseq>NAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNV---IKTVVD--TGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVSGAIDW-AKG</Hsp_qseq> + <Hsp_hseq>NALAAIGQPILEMLIPVFQSLADIVSQLATWFTNLSSPIKEVVIIFTGILAVVGMLLPVFLGLQVAAAAMGTTVVGMITAFLPIVGIIV-----GIVAAITLLIVGLKELWTNHEGFRTAVT-EIWNSIYAFLSMIIQQISSFVMSVWGTLTTWWTENQQLILNAATTVWNAITTVIQTVMTILGPLIQASWENIKLIITAAWEMIKIVVETAINVVLGIIKAVMQVITGDWTGAWETIKQVLSMAWEGIKSLISLALNFIAQYISTAWTGIKNTISNVLSAISSVISSIWTAIQSTISSVLSAIGSTVSTIWNGISNTVSNILNGISNTVSSVWNGVKNTISNA----INGARDAVSNAINAIKNLFNFQIRWPHIPLPHF--RVSGSANPLDWLKGGIPRISIDWYAKG</Hsp_hseq> + <Hsp_midline>NA+ + + ++ LIP+ Q+ D++ + T N+ IK VV TG+ V+G++ V + + T+ G+ + +V G+V + LK +W G AV IW+ I +S I + + ++ ++ T W I A+ +W AI+T + +V+T + IQ E IK + +AAWE+IK V + ++G++ +I + AWE IK S W I + +S I STAW IK TISNV++ I S I + W I+++IS+ L+ I S WN I + +S + I +TVS+ WN + +T++NA ++ R NA+NA +N + I + F V G+A L GG +IDW AKG</Hsp_midline> + </Hsp> + </Hit_hsps> + </Hit> + <Hit> + <Hit_num>8</Hit_num> + <Hit_id>gi|77411259|ref|ZP_00787609.1|</Hit_id> + <Hit_def>tail tape meausure protein [Streptococcus agalactiae CJB111] >gi|77162685|gb|EAO73646.1| tail tape meausure protein [Streptococcus agalactiae CJB111]</Hit_def> + <Hit_accession>ZP_00787609</Hit_accession> + <Hit_len>1039</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>215.697599882754</Hsp_bit-score> + <Hsp_score>548</Hsp_score> + <Hsp_evalue>1.52550005815421e-53</Hsp_evalue> + <Hsp_query-from>387</Hsp_query-from> + <Hsp_query-to>1241</Hsp_query-to> + <Hsp_hit-from>628</Hsp_hit-from> + <Hsp_hit-to>905</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>106</Hsp_identity> + <Hsp_positive>170</Hsp_positive> + <Hsp_gaps>7</Hsp_gaps> + <Hsp_align-len>285</Hsp_align-len> + <Hsp_qseq>AKLVGIIAGISAPIWXXXXXXXXXXXXXXXXYNTNEEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWS</Hsp_qseq> + <Hsp_hseq>APIVGIILGVIAVV-------ALLVVGIQQLWQHHEGFRTAVTEIWNAIYAFLSVIIQQISSFVMSIWGTLTTWWTENQQLILNAANTVWTAISTVIQTIMTILGPYLQASWENIKLIITTAWDIIKVVVETAINVVLGIIKAVMQIITGDWSGAWETIKQVVSTVWEAIKSLISIVLSAIAQFISNSWNGIKGTMTNLLNSIKSVVSNVWNSIKSTISSILSSIGSTVSSVWNGMKATISGVLSGISNTVSSVWNGVKSTITNAINGAKNAVSSAINAIKNLFN</Hsp_hseq> + <Hsp_midline>A +VGII G+ A + A LV G L+ +E FRT V W AI + +S ++ + SFVM +WG + WW ENQ+LI A TVW AI TV++T+MT L P +Q +W+ I ++TT ++IK VV+T + VVLGIIKAVMQ+I GDWSGAWET+K V T+WE IKSL+ + + + Q +K + +I +VV +W+ IK+T+S+ ++++ + ++ ++ T V + IS S++W + +T+ + + + + + IK +++</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>172.55524738001</Hsp_bit-score> + <Hsp_score>436</Hsp_score> + <Hsp_evalue>1.48099780677056e-40</Hsp_evalue> + <Hsp_query-from>660</Hsp_query-from> + <Hsp_query-to>1871</Hsp_query-to> + <Hsp_hit-from>548</Hsp_hit-from> + <Hsp_hit-to>945</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>114</Hsp_identity> + <Hsp_positive>199</Hsp_positive> + <Hsp_gaps>12</Hsp_gaps> + <Hsp_align-len>407</Hsp_align-len> + <Hsp_qseq>AIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVA--IDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVSGAIDW-AKG</Hsp_qseq> + <Hsp_hseq>AMAEMGDAIAATLAPILEILASLLQAVATWFSGLSEPVKQ--FIVIVGSLVAALGLVLPIFIALQAAAMAMGTTIMGMITAAAPIVGIILGVIAVVALLVVGIQQLWQHHEGFRTAVT-EIWNAIYAFLSVIIQQISSFVMSIWGTLTTWWTENQQLILNAANTVWTAISTVIQTIMTILGPYLQASWENIKLIITTAWDIIKVVVETAINVVLGIIKAVMQIITGDWSGAWETIKQVVSTVWEAIKSLISIVLSAIAQFISNSWNGIKGTMTNLLNSIKSVVSNVWNSIKSTISSILSSIGSTVSSVWNGMKATISGVLSGISNTVSSVWNGVKSTITNA----INGAKNAVSSAINAIKNLFNFKIKWPHIPLPHF--SVSGSANPLDWLKGGLPKISIQWYAKG</Hsp_hseq> + <Hsp_midline>A+ + + + L PI++ L+ AV T + + V V++G + A + ++ + + TI I + + I G++ + + ++ +W G AV IW+ I +S I + + +I ++ T W I A+ +WTAIST + +++T + Y+Q E IK + + AW+IIK V + ++G++ +I S AWE IK S +W AI + +S + I S +W IK T++N++ +IKS + WN+IK++IS+ L++I S + WN +K+ IS + I +TVS+ WN + ST+TNA ++ + +A+NA +N + I + F V G+A L GG +I W AKG</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>83.5741453431014</Hsp_bit-score> + <Hsp_score>205</Hsp_score> + <Hsp_evalue>9.04763716179523e-14</Hsp_evalue> + <Hsp_query-from>978</Hsp_query-from> + <Hsp_query-to>1877</Hsp_query-to> + <Hsp_hit-from>540</Hsp_hit-from> + <Hsp_hit-to>882</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>81</Hsp_identity> + <Hsp_positive>141</Hsp_positive> + <Hsp_gaps>67</Hsp_gaps> + <Hsp_align-len>355</Hsp_align-len> + <Hsp_qseq>TVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVAS---------NIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGL--VTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKT-----------AASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAI-----------STAIENIKSTV----------------------SNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVSGAIDWAKGLL</Hsp_qseq> + <Hsp_hseq>TAQNTAKLAMAEMGDAIAATLAPILEILASLLQAVATWFSGLSEPVKQFIVIVGSLVAALGLVLPIFIALQAAAMAMGTTIMGMITAAAPIVG--------IILGVIAVVALLVVGIQQLWQHHEGFRTAVTEIWNAIYAFLSVIIQQISSFVMSIWGTLTTWWTENQQLILNAANTVWTAISTVIQTIMTILGPYLQASWENIKLIITTAWDIIKVVVETAINVVLGIIKAVMQIITGDWSGAWETIKQVVSTVWEAIKSLISIVLSAIAQFISNSWNGIKGTMTN----LLNSIKSVVSNVWNSIKSTISSILSSIGSTVSSVWNGMKATISGVLSGISNTVSSVWNGVKSTI</Hsp_hseq> + <Hsp_midline>T T + + D I T++ + + ++Q + T + V I V S I+ A+ M++ TTI G I ++ II V A + L +VG+ + + + + A++ W I S I I++F+ IW + T AA+T W I T I +MT + ++ +W NIK I+ A + IK E A N + I S A E IK V SN WN + T+TN +++++++ N N+ ++ IS+ +S G ++ G+K ++ + VS + K +</Hsp_midline> + </Hsp> + </Hit_hsps> + </Hit> + <Hit> + <Hit_num>9</Hit_num> + <Hit_id>gi|76786754|ref|YP_329383.1|</Hit_id> + <Hit_def>prophage LambdaSa04, TP901 family tail tape measure protein [Streptococcus agalactiae A909] >gi|76561811|gb|ABA44395.1| prophage LambdaSa04, tail tape measure protein, TP901 family [Streptococcus agalactiae A909]</Hit_def> + <Hit_accession>YP_329383</Hit_accession> + <Hit_len>1039</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>213.386402427249</Hsp_bit-score> + <Hsp_score>542</Hsp_score> + <Hsp_evalue>7.57097807573937e-53</Hsp_evalue> + <Hsp_query-from>387</Hsp_query-from> + <Hsp_query-to>1241</Hsp_query-to> + <Hsp_hit-from>628</Hsp_hit-from> + <Hsp_hit-to>905</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>105</Hsp_identity> + <Hsp_positive>169</Hsp_positive> + <Hsp_gaps>7</Hsp_gaps> + <Hsp_align-len>285</Hsp_align-len> + <Hsp_qseq>AKLVGIIAGISAPIWXXXXXXXXXXXXXXXXYNTNEEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWS</Hsp_qseq> + <Hsp_hseq>APIVGIILGVIAVV-------ALLVVGIQQLWQHHEGFRTAVTEIWNAIYAFLTVIIQQISSFVMSIWGTLITWWTENQQLILNATNTVWTAISTVIQTIMTILAPYLQASWENIKLIITTAWDIIKVVVETAINVVLGIIKAVMQIITGDWSGAWETIKQVVSTVWEVIKSLISIVLSAIAQFISNSWNGIKGTMTNLLNSIKGVVSNVWNGIKSTISSILSSIGSTVSSIWNGMKATISGVLSGISSTVSFVWNGVKSTITNAINGAKNAVSSAINAIKNLFN</Hsp_hseq> + <Hsp_midline>A +VGII G+ A + A LV G L+ +E FRT V W AI + ++ ++ + SFVM +WG ++ WW ENQ+LI TVW AI TV++T+MT L P +Q +W+ I ++TT ++IK VV+T + VVLGIIKAVMQ+I GDWSGAWET+K V T+WE IKSL+ + + + Q +K + +I VV +W+ IK+T+S+ ++++ + +I ++ T V + IS+ S +W + +T+ + + + + + IK +++</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>164.851255861663</Hsp_bit-score> + <Hsp_score>416</Hsp_score> + <Hsp_evalue>3.08806866621938e-38</Hsp_evalue> + <Hsp_query-from>660</Hsp_query-from> + <Hsp_query-to>1871</Hsp_query-to> + <Hsp_hit-from>548</Hsp_hit-from> + <Hsp_hit-to>945</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>111</Hsp_identity> + <Hsp_positive>194</Hsp_positive> + <Hsp_gaps>12</Hsp_gaps> + <Hsp_align-len>407</Hsp_align-len> + <Hsp_qseq>AIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVA--IDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVSGAIDW-AKG</Hsp_qseq> + <Hsp_hseq>AMAEMGDAIAATLAPILEVIASLLQAVATWFSGLSEPVKQ--FIVIVGSLVAALGLVLPIFIALQAAAMAMGTTIMGMITAAAPIVGIILGVIAVVALLVVGIQQLWQHHEGFRTAVT-EIWNAIYAFLTVIIQQISSFVMSIWGTLITWWTENQQLILNATNTVWTAISTVIQTIMTILAPYLQASWENIKLIITTAWDIIKVVVETAINVVLGIIKAVMQIITGDWSGAWETIKQVVSTVWEVIKSLISIVLSAIAQFISNSWNGIKGTMTNLLNSIKGVVSNVWNGIKSTISSILSSIGSTVSSIWNGMKATISGVLSGISSTVSFVWNGVKSTITNA----INGAKNAVSSAINAIKNLFNFKIKWPHIPLPHF--SVSGSANPLDWLKGGLPKISIQWYAKG</Hsp_hseq> + <Hsp_midline>A+ + + + L PI++ L+ AV T + + V V++G + A + ++ + + TI I + + I G++ + + ++ +W G AV IW+ I ++ I + + +I ++ T W I + +WTAIST + +++T + Y+Q E IK + + AW+IIK V + ++G++ +I S AWE IK S +W I + +S + I S +W IK T++N++ +IK + WN IK++IS+ L++I S + WN +K+ IS + I STVS WN + ST+TNA ++ + +A+NA +N + I + F V G+A L GG +I W AKG</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>115.160510568324</Hsp_bit-score> + <Hsp_score>287</Hsp_score> + <Hsp_evalue>2.80602663410135e-23</Hsp_evalue> + <Hsp_query-from>543</Hsp_query-from> + <Hsp_query-to>1391</Hsp_query-to> + <Hsp_hit-from>637</Hsp_hit-from> + <Hsp_hit-to>900</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>70</Hsp_identity> + <Hsp_positive>130</Hsp_positive> + <Hsp_gaps>19</Hsp_gaps> + <Hsp_align-len>283</Hsp_align-len> + <Hsp_qseq>ISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAI</Hsp_qseq> + <Hsp_hseq>VIAVVALLVVGIQQLW--------QHHEGFRTAVTEIWNAIYAFLTVIIQQISSFVMSIWGTLITWWTENQQLILNATNTVWTAISTVIQTIMTILAPYLQASWENIKLIITTAWDIIKVVVETAINVVLGIIKAVMQIITGDWSGAWETIKQVVSTVWEVIKSLISIVLSAIAQFISNSWNGIKGTMTNLLNSIKGVVSNVWNGIKSTISSILSSIGSTV-----------SSIWNGMKATISGVLSGISSTVSFVWNGVKSTITNAINGAKNAVSSAINAI</Hsp_hseq> + <Hsp_midline>+ V +V + LW ++ E R +WNAI + ++ + V + W ++ T +I +T + +I+ +M ++ +WE +K + T W+ IK +V+ AI+ ++ I + + + W W TI VV +W+ IK+ +S ++A+ + I N I+ T + N+I V SN+W I +T+ S+L++I + S+ W +KA + +L I V+ ++ +K I+NA K S NAI</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>4</Hsp_num> + <Hsp_bit-score>82.4185466153494</Hsp_bit-score> + <Hsp_score>202</Hsp_score> + <Hsp_evalue>2.01560327678347e-13</Hsp_evalue> + <Hsp_query-from>978</Hsp_query-from> + <Hsp_query-to>1847</Hsp_query-to> + <Hsp_hit-from>540</Hsp_hit-from> + <Hsp_hit-to>850</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>74</Hsp_identity> + <Hsp_positive>133</Hsp_positive> + <Hsp_gaps>45</Hsp_gaps> + <Hsp_align-len>323</Hsp_align-len> + <Hsp_qseq>TVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVAS---------NIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGL--VTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKT-----------AASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAI-----------STAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVS</Hsp_qseq> + <Hsp_hseq>TAQNTAKLAMAEMGDAIAATLAPILEVIASLLQAVATWFSGLSEPVKQFIVIVGSLVAALGLVLPIFIALQAAAMAMGTTIMGMITAAAPIVG--------IILGVIAVVALLVVGIQQLWQHHEGFRTAVTEIWNAIYAFLTVIIQQISSFVMSIWGTLITWWTENQQLILNATNTVWTAISTVIQTIMTILAPYLQASWENIKLIITTAWDIIKVVVETAINVVLGIIKAVMQIITGDWSGAWETIKQVVSTVWEVIKSLIS----IVLSAIAQFISNSWNGIKGTMTNLLNSIKGVVSNVWNGIKSTISSILSSIGSTVS</Hsp_hseq> + <Hsp_midline>T T + + D I T++ + + ++Q + T + V I V S I+ A+ M++ TTI G I ++ II V A + L +VG+ + + + + A++ W I + I I++F+ IW + T A +T W I T I +MT + ++ +W NIK I+ A + IK E A N + I S A E IK VS W + S ++ ++SA+ N+ N + ++N ++ +++ G+K ++ ++G VS</Hsp_midline> + </Hsp> + </Hit_hsps> + </Hit> + <Hit> + <Hit_num>10</Hit_num> + <Hit_id>gi|50914476|ref|YP_060448.1|</Hit_id> + <Hit_def>unknown phage protein [Streptococcus pyogenes MGAS10394] >gi|40218580|gb|AAR83234.1| prophage pi2 protein [Streptococcus pyogenes] >gi|50261625|gb|AAT72393.1| unknown [Streptococcus pyogenes] >gi|50903550|gb|AAT87265.1| unknown phage protein [Streptococcus pyogenes MGAS10394]</Hit_def> + <Hit_accession>YP_060448</Hit_accession> + <Hit_len>1039</Hit_len> + <Hit_hsps> + <Hsp> + <Hsp_num>1</Hsp_num> + <Hsp_bit-score>207.608408788489</Hsp_bit-score> + <Hsp_score>527</Hsp_score> + <Hsp_evalue>4.15433379501178e-51</Hsp_evalue> + <Hsp_query-from>372</Hsp_query-from> + <Hsp_query-to>1241</Hsp_query-to> + <Hsp_hit-from>623</Hsp_hit-from> + <Hsp_hit-to>905</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>104</Hsp_identity> + <Hsp_positive>166</Hsp_positive> + <Hsp_gaps>7</Hsp_gaps> + <Hsp_align-len>290</Hsp_align-len> + <Hsp_qseq>LSVMFAKLVGIIAGISAPIWXXXXXXXXXXXXXXXXYNTNEEFRTKVQAAWEAIKSAISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWS</Hsp_qseq> + <Hsp_hseq>LVVAAAPIVGTVLGIIAVI-------TLLVVWIQELWQNNEGFRTAVIEIWNAIYAFISVIIQEISTFIMTIWGTLTTWWTENQALIQAAVETVWNAISTVIQTVMSLIGPYLEAAWANIQLIITTAWEIIKTVVETAITVVLGIIKAIMQAITGDWSGAWETIKGVLQRVWQAIQQIVTTILSAIGQFISNTWNGIKNTFSNILSAISGIVSSIWNTIKSVISSVISSIVSFVSSGWSGIQQTISSILSGISSTVSSVWNGIKNSISNAINGAKNVVSSAINAIKNLFN</Hsp_hseq> + <Hsp_midline>L V A +VG + GI A I LV L+ NE FRT V W AI + IS ++ + +F+M +WG + WW ENQ LI+ ETVWNAI TV++TVM+ + P ++ AW I ++TT +IKTVV+T + VVLGIIKA+MQ I GDWSGAWET+KGV +W+ I+ +V + + Q +K+ + + I +V IW+ IK+ +S+ I+++ + + + IQ T ++ + IS+ S++W I ++ + + + + + IK +++</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>2</Hsp_num> + <Hsp_bit-score>155.221266463729</Hsp_bit-score> + <Hsp_score>391</Hsp_score> + <Hsp_evalue>2.44682334507151e-35</Hsp_evalue> + <Hsp_query-from>660</Hsp_query-from> + <Hsp_query-to>1871</Hsp_query-to> + <Hsp_hit-from>548</Hsp_hit-from> + <Hsp_hit-to>945</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>111</Hsp_identity> + <Hsp_positive>192</Hsp_positive> + <Hsp_gaps>20</Hsp_gaps> + <Hsp_align-len>411</Hsp_align-len> + <Hsp_qseq>AIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVA------IDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSGIWEGIKTAASTAWEWIKTTISNVMTTIKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTNAGPRIVSAVRTGFDNAVNAARNFISNAISVGGDLINGFVEGVKGAAGRLIDAVGGAVSGAIDW-AKG</Hsp_qseq> + <Hsp_hseq>AMAEVGGVLAEALAPVLELLAQLLQAVANWFSN-LPGPIQTFIVIMGGLITVVGLLLPGLLA-----LQAAAVAMGTTIGGLVVAAAPIVGTVLGIIAVITLLVVWIQELWQNNEGFRTAVI-EIWNAIYAFISVIIQEISTFIMTIWGTLTTWWTENQALIQAAVETVWNAISTVIQTVMSLIGPYLEAAWANIQLIITTAWEIIKTVVETAITVVLGIIKAIMQAITGDWSGAWETIKGVLQRVWQAIQQIVTTILSAIGQFISNTWNGIKNTFSNILSAISGIVSSIWNTIKSVISSVISSIVSFVSSGWSGIQQTISSILSGISSTVSSVWNGIKNSISNA----INGAKNVVSSAINAIKNLFNFKISWPHIPLPHF--SVSGSANPLDWLKGGLPKISIAWYAKG</Hsp_hseq> + <Hsp_midline>A+ V + AL P+++ L+ AV N + + T + ++ G+I V ++ G + L+ A + I LV A + G++ + + +++ +W G AV+ IW+ I +S I + I I ++ T W I +W AIST + +V++ I Y++ I+ + + AWEIIK V + ++G++ I S AWE IK +W AI ++ I I S W IK T SN+++ I + + WN IK+ IS+ +++I S + W+ I+ IS+ + I STVS+ WN + ++++NA ++ + +A+NA +N + IS + F V G+A L GG +I W AKG</Hsp_midline> + </Hsp> + <Hsp> + <Hsp_num>3</Hsp_num> + <Hsp_bit-score>121.708903358919</Hsp_bit-score> + <Hsp_score>304</Hsp_score> + <Hsp_evalue>2.99798279087674e-25</Hsp_evalue> + <Hsp_query-from>543</Hsp_query-from> + <Hsp_query-to>1673</Hsp_query-to> + <Hsp_hit-from>637</Hsp_hit-from> + <Hsp_hit-to>1004</Hsp_hit-to> + <Hsp_query-frame>3</Hsp_query-frame> + <Hsp_hit-frame>0</Hsp_hit-frame> + <Hsp_identity>89</Hsp_identity> + <Hsp_positive>168</Hsp_positive> + <Hsp_gaps>29</Hsp_gaps> + <Hsp_align-len>387</Hsp_align-len> + <Hsp_qseq>ISTAVEAVVSFVMDLWGQMVAWWNENQELIRQTAETVWNAIRTVVETVMTALIPIVQTAWDLILAVVTTVLNVIKTVVDTGLKVVLGIIKAVMQMINGDWSGAWETLKGVAGTIWEGIKSLVQVAIDGLVQIFQTGLAFLKSIWDTVWGTIMAVVGPIWDWIKTTVSNAITAVWEIIQNIMTSIQTTWDTVWNAISTVASNIWTAISTTVMSVLTTIWGYIQTYLELIKTVWSAAWEIIKAVFAAILLTIVGLVTGNFDLIKQAISNAWEIIKTKTSEIWNAITTFLSG--IWEGIK------TAASTAWEWIKTTISNVMTT--IKSNIETAWNNIKTSISNALNNIKSAAENAWNNIKSAISTAIENIKSTVSNGWNNLVSTVTN</Hsp_qseq> + <Hsp_hseq>IIAVITLLVVWIQELW--------QNNEGFRTAVIEIWNAIYAFISVIIQEISTFIMTIWGTLTTWWTENQALIQAAVETVWNAISTVIQTVMSLIGPYLEAAWANIQLIITTAWEIIKTVVETAITVVLGIIKAIMQAITGDWSGAWETIKGVLQRVWQAIQQIVTTILSAIGQFISNTWNGIKNTFSNILSAISGIVSSIWNTIKSVISSVISSIVSFV-----------SSGWSGIQQTISSILSGISSTVSSVWNGIKNSISNAINGAKNVVSSAINAIKNLFNFKISWPHIPLPHFSVSGSANPLDWLKGGLPKISIAWYAKGGILTKPTAFGMNEKQLMVGGEAGKEAVLPLTKQNLAAIGEGIASTMGTGGNFINVSITD</Hsp_hseq> + <Hsp_midline>I + +V ++ +LW +N E R +WNAI + ++ + + T W + T +I+ V+T + +I+ VM +I AW ++ + T WE IK++V+ AI ++ I + + + W W TI V+ +W I+ V+ ++A+ + I N I+ T+ + +AIS + S+IW I + + SV+++I ++ S+ W I+ ++IL I V+ ++ IK +ISNA K S NAI + W I + ++ +W+K + + K I T + + ++ E K ++ E I ST+ G N + ++T+</Hsp_midline> + </Hsp> + </Hit_hsps> + </Hit> + </Iteration_hits> + <Iteration_stat> + <Statistics> + <Statistics_db-num>12310662</Statistics_db-num> + <Statistics_db-len>-87459526</Statistics_db-len> + <Statistics_hsp-len>0</Statistics_hsp-len> + <Statistics_eff-space>1174893963300</Statistics_eff-space> + <Statistics_kappa>0.041</Statistics_kappa> + <Statistics_lambda>0.267</Statistics_lambda> + <Statistics_entropy>0.14</Statistics_entropy> + </Statistics> + </Iteration_stat> + </Iteration> + </BlastOutput_iterations> +</BlastOutput>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/blastx_sample_converted.tabular Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,33 @@ +phage_suis gi|119953746|ref|YP_950551.1| 100.00 518 0 0 336 1889 25 542 0.0 988 +phage_suis gi|289551554|ref|YP_003472458.1| 32.95 516 280 6 342 1889 657 1106 6e-66 256 +phage_suis gi|223044325|ref|ZP_03614360.1| 30.22 546 327 7 393 1889 655 1193 1e-64 252 +phage_suis gi|223044325|ref|ZP_03614360.1| 19.88 508 328 9 384 1796 844 1309 6e-28 130 +phage_suis gi|268611153|ref|ZP_06144880.1| 28.64 639 371 11 78 1847 440 1042 1e-60 239 +phage_suis gi|268611153|ref|ZP_06144880.1| 23.36 441 286 7 543 1856 547 938 4e-31 141 +phage_suis gi|268611153|ref|ZP_06144880.1| 25.27 459 266 11 522 1844 722 1121 8e-31 140 +phage_suis gi|268611153|ref|ZP_06144880.1| 24.63 406 267 8 501 1694 770 1144 3e-23 115 +phage_suis gi|268611153|ref|ZP_06144880.1| 27.80 241 145 3 492 1148 811 1044 6e-16 90.9 +phage_suis gi|268611153|ref|ZP_06144880.1| 19.76 253 168 6 1158 1883 547 775 3e-04 52.0 +phage_suis gi|268610688|ref|ZP_06144415.1| 28.95 639 369 11 78 1847 440 1042 3e-59 234 +phage_suis gi|268610688|ref|ZP_06144415.1| 24.64 491 316 9 501 1856 770 1245 4e-39 167 +phage_suis gi|268610688|ref|ZP_06144415.1| 23.79 517 319 9 492 1832 811 1322 3e-37 161 +phage_suis gi|268610688|ref|ZP_06144415.1| 21.91 493 322 11 510 1859 905 1377 1e-25 123 +phage_suis gi|268610688|ref|ZP_06144415.1| 20.55 292 197 5 486 1343 1138 1400 4e-10 71.6 +phage_suis gi|268610688|ref|ZP_06144415.1| 21.41 341 225 10 894 1883 467 775 8e-05 53.9 +phage_suis gi|153811333|ref|ZP_01964001.1| 28.34 621 364 16 108 1847 493 1073 8e-55 219 +phage_suis gi|153811333|ref|ZP_01964001.1| 29.67 428 250 9 519 1760 709 1099 2e-47 195 +phage_suis gi|153811333|ref|ZP_01964001.1| 29.41 391 226 7 498 1640 746 1096 1e-39 169 +phage_suis gi|153811333|ref|ZP_01964001.1| 26.49 268 174 3 492 1256 854 1111 3e-24 118 +phage_suis gi|153811333|ref|ZP_01964001.1| 27.12 306 198 4 510 1385 816 1110 1e-23 116 +phage_suis gi|262113750|emb|CAR95417.1| 38.46 286 169 1 384 1241 540 818 2e-54 218 +phage_suis gi|262113750|emb|CAR95417.1| 29.68 411 271 7 657 1871 460 858 3e-40 171 +phage_suis gi|77411259|ref|ZP_00787609.1| 37.19 285 172 1 387 1241 628 905 2e-53 215 +phage_suis gi|77411259|ref|ZP_00787609.1| 28.01 407 281 6 660 1871 548 945 1e-40 172 +phage_suis gi|77411259|ref|ZP_00787609.1| 22.82 355 207 7 978 1877 540 882 9e-14 83.6 +phage_suis gi|76786754|ref|YP_329383.1| 36.84 285 173 1 387 1241 628 905 8e-53 213 +phage_suis gi|76786754|ref|YP_329383.1| 27.27 407 284 6 660 1871 548 945 3e-38 164 +phage_suis gi|76786754|ref|YP_329383.1| 24.73 283 194 2 543 1391 637 900 3e-23 115 +phage_suis gi|76786754|ref|YP_329383.1| 22.91 323 204 6 978 1847 540 850 2e-13 82.4 +phage_suis gi|50914476|ref|YP_060448.1| 35.86 290 179 1 372 1241 623 905 4e-51 207 +phage_suis gi|50914476|ref|YP_060448.1| 27.01 411 280 7 660 1871 548 945 2e-35 155 +phage_suis gi|50914476|ref|YP_060448.1| 23.00 387 269 5 543 1673 637 1004 3e-25 121
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/blast_reporting_fields.loc.sample Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,34 @@ +#value type subtype sort filter default min max choose short_name name +# Remember to edit tool_data_table_conf.xml for column spec! +length numeric int 1 1 1 Length Alignment length +qstart numeric int 1 1 1 Q. Start Alignment start in query +qend numeric int 1 1 1 Q. End Alignment end in query +sstart numeric int 1 1 1 S. Start Alignment start in subject +send numeric int 1 1 1 S. End Alignment end in subject +qseq text atgc 0 1 1 Q. Alignment Aligned part of query sequence +sseq text atgc 0 1 1 S. Alignment Aligned part of subject sequence +mseq text atgc 0 1 1 Alignment Alignment, matched part +# +bitscore numeric int 1 1 1 Bit Score Bit score +evalue numeric float 1 1 1 E-value Expectation value +pcov numeric int 1 1 1 % Coverage % coverage +gapopen numeric int 1 1 1 Gaps-openings # of gap openings +gaps numeric int 1 1 1 Gaps Total number of gaps +mismatch numeric int 1 1 1 Mismatches # of mismatches +nident numeric int 1 1 1 Ident. Matches # of identical matches +positive numeric int 1 1 1 Pos. Matches # of positive-scoring matches +pident numeric float 1 1 97 90 100 1 % Identical % of identical matches +ppos numeric float 1 1 1 % Positive % of positive-scoring matches +score numeric int 1 1 1 Raw Score Raw Score +# +qseqid text int 1 1 1 Query Id Query sequence id +qframe numeric int 1 1 1 Query Frame Query frame +qlen numeric int 1 1 1 Query Length Query sequence length +# +accessionid text 1 1 1 Accession Subject accession id +sframe numeric int 1 1 1 Subject Frame Subject frame +sallseqdescr text 0 1 1 Subject Descriptions Subject sequence desc(s) (all) +sseqdescr text 1 1 1 Subject Description Subject sequence desc. (first) +sseqid text int 1 1 1 Subject Id Subject sequence id +sallseqid text 1 1 1 Subject Ids Subject sequence ids (all) +slen numeric int 1 1 1 Subject Length Subject sequence length
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/blast_reporting_templates.loc.sample Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,7 @@ +#value name description +# Add list of html templates here +templates.html_report Standard HTML Report A report that can have sections and table sections +templates.html_selectable_report Selectable HTML Report Like the Standard HTML Report, but also enables selecting items for inclusion in the FASTA Selections Tool. +# +# Add list of customized templates here. The folder they are in needs to be mentioned in a .pth file (usually located in your python's site-packages folder). +#templates_custom.html_report Customized report Customized report ...
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool-data/fasta_reference_dbs.loc.sample Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,8 @@ +#value key type active name path +# Add list of reference database file names here, (remove .csv suffix) and applicable columns +# Reference databases need to be together in the ... /usr/local/galaxy/shared/bccdc_tools/tool-data/blast_report/bins/ folder +#16S_euzby 16S 1 Euzby /usr/local/galaxy/shared/ngs_data/ +#16S_ncbi 16S 1 16S Microbial (NCBI) /usr/local/galaxy/shared/ngs_data/ +#16S_rdp 16S 1 16S RDP /usr/local/galaxy/shared/ngs_data/ +#CPN60 CPN60 1 CPN60 Chaperonin /usr/local/galaxy/shared/ngs_data/ +#hisA_burkholderia hisA 1 hisA Burkholderia /usr/local/galaxy/shared/ngs_data/
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_conf.xml.sample Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,6 @@ +<toolbox> + <section name="BCCDC Tools" id="bccdc_tools"> + <label text="BLAST" id="bccdc_BLAST" /> + <tool file="blast_reporting/blast_reporting.xml" /> + </section> +</toolbox>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_data_table_conf.xml.sample Mon Mar 02 20:46:00 2015 -0500 @@ -0,0 +1,16 @@ +<tables> + <!-- List of BLAST+ FIELDS and DATA used in /bccdc_tools/blast_reporting/ tool --> + <!-- columns>value, name, type, filter, sort, selected, default, min, max </columns --> + <table name="blast_reporting_fields" comment_char="#"> + <columns>value, type, subtype, sort, filter, default, min, max, choose, short_name, name</columns> + <file path="blast_reporting_fields.loc" /> + </table> + <table name="fasta_reference_dbs" comment_char="#"> + <columns>value, key, type, active, name, path</columns> + <file path="fasta_reference_dbs.loc" /> + </table> + <table name="blast_reporting_templates" comment_char="#"> + <columns>value, name, description</columns> + <file path="blast_reporting_templates.loc" /> + </table> +</tables>