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annotate Roary/t/data/sequences_with_unknowns.faa @ 0:c47a5f61bc9f draft

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author dereeper
date Fri, 14 May 2021 20:27:06 +0000
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1 >1234_00186 GGDEF family protein
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2 MNFENEYDLEKLVNNSLDLLTIVDLSGNVLLVNPAFERTLGWKKEDLVGKDPFHLLHPED
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3 KESTYKEFEKLNQGLLTLSFQNRYICADGQYRYFSWTASPDLVSGLVYVTGRDITDVIES
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4 NRKISQLAVKLKETNDRLFEQASTDPLTKLKNRRMFNEELNNLIHACDKESHPLSLLMID
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5 ADHFKDYNDKFGHIAGDKVLVELASILTKTFRKKDVLARYGGEEFIAALPNTSEPEANQI
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6 AERLVQTVREFSWEKRSVTISVGITTYNFNPTSKSINSEYLLNLIEQADKALYCSKVSGR
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7 XXXXXXXXXXXXXXXXXXXYYI*
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8 >1234_00325 only a few unknowns so keep
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9 MAFDPSVPQQQAQAPAGTLLFPEGSSANTLNVLHSGTVRYLTEVPGGRKLELFKLNGANL
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10 TPGSVALFTSGRYPFHLQAEEACVISTYAMNRDTISKSVGSRVSLGLMVARTLLREITEL
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11 FKKSNQIRKITSEIEKVNDNLSILYYQFNPSVFPDIKPGSPIPEVSADVVDPVMRLCREN
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12 LKLFFDNGGILPDRPSPQFLEEEHESQLTRLYPEEIDFQDGEFNFIRKLVMQDPKILNVL
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13 FTADPSMLAYVCSKLANVLDQISGILKTCLTDLDEAFRIFFIGENSLVEKFYLILDITSS
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14 GYGTAPAEFVIPVLGAFAGKIEKYKNGHQALFGVPVANISPNTQAFQSKAVTLAKKMEET
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15 APKVQAPVTSSATAGVDVDAIRKELDNSASVIIQFSGLGAEQIKEFSALMVKVKSLKNPL
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16 DPEGDNRKVRRTLGRHYWDMYQECFTKYMNSNRNVPKPVELMLKYGYFDETLVDDSQIAF
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17 MYTQKDPANFTSNVPISLGTEWLEKVFKREVPTSLDEMGQNFFEKVKLENRNIVIKKESD
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18 IPPELDNPDTRLKFEFASLYEANVRLTSGSPATHFPILTKFHSQMAIDKSYVSKKILEEV
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19 VHELMAVDYSIFHREVIYNNNELGITKEFIQKCVIPDFILVPSIGTKVMMWQDLSIHRGA
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20 GSKESPGRIVLPIFAQGDLKTMVADALAAFRWELTKSILGAEWNNVGNPSITADYTDYIQ
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21 FFKKNKDLSMEIKEKLASDFKRFRNDRDIFANDYQLWMKYEADGVQRLNKVVRGIFYRHI
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22 PFSKQVRDKVAXXXXXXXXXXXXXLLPLQRSITDLLILEIENILK*
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23 >1234_00377 Uncharacterized protein conserved in bacteria
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24 MTLNEFAKNVLFGSGLEDKLFSPPVHPVDIRSFDFLNVPSLPAREKKIQISEQKSKIPRL
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25 EQLFNEENRIITLHHFANHELMAIELFAWAILKFQDAPSSIRFGLYRTLLEEQTHLKMYL
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26 SEMKKGGMELGDRPLNFIFWKQVPKMQTLEKFXXXXXXXXXXXXXXXXXF*