Mercurial > repos > devteam > ncbi_blast_plus
annotate test-data/blastp_four_human_vs_rhodopsin.xml @ 11:4c4a0da938ff draft
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
Supports $GALAXY_SLOTS.
Includes more tests and heavy use of macros.
author | peterjc |
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date | Thu, 05 Dec 2013 06:55:59 -0500 |
parents | 1f546099212f |
children | 623f727cdff1 |
rev | line source |
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0 | 1 <?xml version="1.0"?> |
8
1f546099212f
Uploaded v0.0.17, default to extended 24 column tabular output (rather than standard 12 column output). This should avoid many cases of repeated BLAST jobs being run due to later needing the extra columns.
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2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> |
0 | 3 <BlastOutput> |
4 <BlastOutput_program>blastp</BlastOutput_program> | |
11
4c4a0da938ff
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5 <BlastOutput_version>BLASTP 2.2.28+</BlastOutput_version> |
0 | 6 <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference> |
7 <BlastOutput_db></BlastOutput_db> | |
8 <BlastOutput_query-ID>sp|Q9BS26|ERP44_HUMAN</BlastOutput_query-ID> | |
9 <BlastOutput_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</BlastOutput_query-def> | |
10 <BlastOutput_query-len>406</BlastOutput_query-len> | |
11 <BlastOutput_param> | |
12 <Parameters> | |
13 <Parameters_matrix>BLOSUM62</Parameters_matrix> | |
14 <Parameters_expect>1e-08</Parameters_expect> | |
15 <Parameters_gap-open>11</Parameters_gap-open> | |
16 <Parameters_gap-extend>1</Parameters_gap-extend> | |
17 <Parameters_filter>F</Parameters_filter> | |
18 </Parameters> | |
19 </BlastOutput_param> | |
11
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20 <BlastOutput_iterations> |
4c4a0da938ff
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21 <Iteration> |
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22 <Iteration_iter-num>1</Iteration_iter-num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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23 <Iteration_query-ID>sp|Q9BS26|ERP44_HUMAN</Iteration_query-ID> |
4c4a0da938ff
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24 <Iteration_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def> |
4c4a0da938ff
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25 <Iteration_query-len>406</Iteration_query-len> |
4c4a0da938ff
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26 <Iteration_hits> |
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27 </Iteration_hits> |
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28 <Iteration_stat> |
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29 <Statistics> |
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30 <Statistics_db-num>0</Statistics_db-num> |
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31 <Statistics_db-len>0</Statistics_db-len> |
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32 <Statistics_hsp-len>30</Statistics_hsp-len> |
4c4a0da938ff
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33 <Statistics_eff-space>119568</Statistics_eff-space> |
4c4a0da938ff
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34 <Statistics_kappa>0.041</Statistics_kappa> |
4c4a0da938ff
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35 <Statistics_lambda>0.267</Statistics_lambda> |
4c4a0da938ff
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36 <Statistics_entropy>0.14</Statistics_entropy> |
4c4a0da938ff
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37 </Statistics> |
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38 </Iteration_stat> |
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39 <Iteration_message>No hits found</Iteration_message> |
4c4a0da938ff
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40 </Iteration> |
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41 <Iteration> |
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42 <Iteration_iter-num>2</Iteration_iter-num> |
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43 <Iteration_query-ID>sp|Q9BS26|ERP44_HUMAN</Iteration_query-ID> |
4c4a0da938ff
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44 <Iteration_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def> |
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45 <Iteration_query-len>406</Iteration_query-len> |
4c4a0da938ff
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46 <Iteration_hits> |
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47 </Iteration_hits> |
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48 <Iteration_stat> |
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49 <Statistics> |
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50 <Statistics_db-num>0</Statistics_db-num> |
4c4a0da938ff
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51 <Statistics_db-len>0</Statistics_db-len> |
4c4a0da938ff
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52 <Statistics_hsp-len>30</Statistics_hsp-len> |
4c4a0da938ff
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peterjc
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53 <Statistics_eff-space>119568</Statistics_eff-space> |
4c4a0da938ff
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54 <Statistics_kappa>0.041</Statistics_kappa> |
4c4a0da938ff
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peterjc
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55 <Statistics_lambda>0.267</Statistics_lambda> |
4c4a0da938ff
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56 <Statistics_entropy>0.14</Statistics_entropy> |
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57 </Statistics> |
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58 </Iteration_stat> |
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59 <Iteration_message>No hits found</Iteration_message> |
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60 </Iteration> |
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61 <Iteration> |
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62 <Iteration_iter-num>3</Iteration_iter-num> |
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63 <Iteration_query-ID>sp|Q9BS26|ERP44_HUMAN</Iteration_query-ID> |
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64 <Iteration_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def> |
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65 <Iteration_query-len>406</Iteration_query-len> |
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66 <Iteration_hits> |
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67 </Iteration_hits> |
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68 <Iteration_stat> |
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69 <Statistics> |
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70 <Statistics_db-num>0</Statistics_db-num> |
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71 <Statistics_db-len>0</Statistics_db-len> |
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72 <Statistics_hsp-len>30</Statistics_hsp-len> |
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73 <Statistics_eff-space>119568</Statistics_eff-space> |
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74 <Statistics_kappa>0.041</Statistics_kappa> |
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75 <Statistics_lambda>0.267</Statistics_lambda> |
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76 <Statistics_entropy>0.14</Statistics_entropy> |
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77 </Statistics> |
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78 </Iteration_stat> |
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79 <Iteration_message>No hits found</Iteration_message> |
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80 </Iteration> |
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81 <Iteration> |
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82 <Iteration_iter-num>4</Iteration_iter-num> |
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83 <Iteration_query-ID>sp|Q9BS26|ERP44_HUMAN</Iteration_query-ID> |
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84 <Iteration_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def> |
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85 <Iteration_query-len>406</Iteration_query-len> |
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86 <Iteration_hits> |
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87 </Iteration_hits> |
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88 <Iteration_stat> |
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89 <Statistics> |
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90 <Statistics_db-num>0</Statistics_db-num> |
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91 <Statistics_db-len>0</Statistics_db-len> |
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92 <Statistics_hsp-len>30</Statistics_hsp-len> |
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93 <Statistics_eff-space>119568</Statistics_eff-space> |
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94 <Statistics_kappa>0.041</Statistics_kappa> |
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95 <Statistics_lambda>0.267</Statistics_lambda> |
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96 <Statistics_entropy>0.14</Statistics_entropy> |
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97 </Statistics> |
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98 </Iteration_stat> |
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99 <Iteration_message>No hits found</Iteration_message> |
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100 </Iteration> |
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101 <Iteration> |
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102 <Iteration_iter-num>5</Iteration_iter-num> |
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103 <Iteration_query-ID>sp|Q9BS26|ERP44_HUMAN</Iteration_query-ID> |
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104 <Iteration_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def> |
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105 <Iteration_query-len>406</Iteration_query-len> |
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106 <Iteration_hits> |
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107 </Iteration_hits> |
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108 <Iteration_stat> |
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109 <Statistics> |
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110 <Statistics_db-num>0</Statistics_db-num> |
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111 <Statistics_db-len>0</Statistics_db-len> |
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112 <Statistics_hsp-len>30</Statistics_hsp-len> |
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113 <Statistics_eff-space>119568</Statistics_eff-space> |
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114 <Statistics_kappa>0.041</Statistics_kappa> |
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115 <Statistics_lambda>0.267</Statistics_lambda> |
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116 <Statistics_entropy>0.14</Statistics_entropy> |
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117 </Statistics> |
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118 </Iteration_stat> |
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119 <Iteration_message>No hits found</Iteration_message> |
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120 </Iteration> |
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121 <Iteration> |
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122 <Iteration_iter-num>6</Iteration_iter-num> |
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123 <Iteration_query-ID>sp|Q9BS26|ERP44_HUMAN</Iteration_query-ID> |
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124 <Iteration_query-def>Endoplasmic reticulum resident protein 44 OS=Homo sapiens GN=ERP44 PE=1 SV=1</Iteration_query-def> |
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125 <Iteration_query-len>406</Iteration_query-len> |
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126 <Iteration_hits> |
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127 </Iteration_hits> |
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128 <Iteration_stat> |
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129 <Statistics> |
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130 <Statistics_db-num>0</Statistics_db-num> |
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131 <Statistics_db-len>0</Statistics_db-len> |
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132 <Statistics_hsp-len>30</Statistics_hsp-len> |
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133 <Statistics_eff-space>119568</Statistics_eff-space> |
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134 <Statistics_kappa>0.041</Statistics_kappa> |
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135 <Statistics_lambda>0.267</Statistics_lambda> |
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136 <Statistics_entropy>0.14</Statistics_entropy> |
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137 </Statistics> |
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138 </Iteration_stat> |
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139 <Iteration_message>No hits found</Iteration_message> |
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140 </Iteration> |
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141 <Iteration> |
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142 <Iteration_iter-num>7</Iteration_iter-num> |
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143 <Iteration_query-ID>sp|Q9NSY1|BMP2K_HUMAN</Iteration_query-ID> |
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144 <Iteration_query-def>BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def> |
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145 <Iteration_query-len>1161</Iteration_query-len> |
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146 <Iteration_hits> |
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147 </Iteration_hits> |
4c4a0da938ff
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148 <Iteration_stat> |
4c4a0da938ff
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149 <Statistics> |
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150 <Statistics_db-num>0</Statistics_db-num> |
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151 <Statistics_db-len>0</Statistics_db-len> |
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152 <Statistics_hsp-len>38</Statistics_hsp-len> |
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153 <Statistics_eff-space>348130</Statistics_eff-space> |
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154 <Statistics_kappa>0.041</Statistics_kappa> |
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155 <Statistics_lambda>0.267</Statistics_lambda> |
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156 <Statistics_entropy>0.14</Statistics_entropy> |
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157 </Statistics> |
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158 </Iteration_stat> |
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159 <Iteration_message>No hits found</Iteration_message> |
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160 </Iteration> |
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161 <Iteration> |
4c4a0da938ff
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162 <Iteration_iter-num>8</Iteration_iter-num> |
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163 <Iteration_query-ID>sp|Q9NSY1|BMP2K_HUMAN</Iteration_query-ID> |
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164 <Iteration_query-def>BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def> |
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165 <Iteration_query-len>1161</Iteration_query-len> |
4c4a0da938ff
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166 <Iteration_hits> |
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167 </Iteration_hits> |
4c4a0da938ff
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168 <Iteration_stat> |
4c4a0da938ff
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169 <Statistics> |
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170 <Statistics_db-num>0</Statistics_db-num> |
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171 <Statistics_db-len>0</Statistics_db-len> |
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172 <Statistics_hsp-len>38</Statistics_hsp-len> |
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173 <Statistics_eff-space>348130</Statistics_eff-space> |
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174 <Statistics_kappa>0.041</Statistics_kappa> |
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175 <Statistics_lambda>0.267</Statistics_lambda> |
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176 <Statistics_entropy>0.14</Statistics_entropy> |
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177 </Statistics> |
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178 </Iteration_stat> |
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179 <Iteration_message>No hits found</Iteration_message> |
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180 </Iteration> |
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181 <Iteration> |
4c4a0da938ff
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182 <Iteration_iter-num>9</Iteration_iter-num> |
4c4a0da938ff
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183 <Iteration_query-ID>sp|Q9NSY1|BMP2K_HUMAN</Iteration_query-ID> |
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184 <Iteration_query-def>BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def> |
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185 <Iteration_query-len>1161</Iteration_query-len> |
4c4a0da938ff
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186 <Iteration_hits> |
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187 </Iteration_hits> |
4c4a0da938ff
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188 <Iteration_stat> |
4c4a0da938ff
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189 <Statistics> |
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190 <Statistics_db-num>0</Statistics_db-num> |
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191 <Statistics_db-len>0</Statistics_db-len> |
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192 <Statistics_hsp-len>38</Statistics_hsp-len> |
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193 <Statistics_eff-space>348130</Statistics_eff-space> |
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194 <Statistics_kappa>0.041</Statistics_kappa> |
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195 <Statistics_lambda>0.267</Statistics_lambda> |
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196 <Statistics_entropy>0.14</Statistics_entropy> |
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197 </Statistics> |
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198 </Iteration_stat> |
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199 <Iteration_message>No hits found</Iteration_message> |
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200 </Iteration> |
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201 <Iteration> |
4c4a0da938ff
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202 <Iteration_iter-num>10</Iteration_iter-num> |
4c4a0da938ff
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203 <Iteration_query-ID>sp|Q9NSY1|BMP2K_HUMAN</Iteration_query-ID> |
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204 <Iteration_query-def>BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def> |
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205 <Iteration_query-len>1161</Iteration_query-len> |
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206 <Iteration_hits> |
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207 </Iteration_hits> |
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208 <Iteration_stat> |
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209 <Statistics> |
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210 <Statistics_db-num>0</Statistics_db-num> |
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211 <Statistics_db-len>0</Statistics_db-len> |
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212 <Statistics_hsp-len>38</Statistics_hsp-len> |
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213 <Statistics_eff-space>348130</Statistics_eff-space> |
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214 <Statistics_kappa>0.041</Statistics_kappa> |
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215 <Statistics_lambda>0.267</Statistics_lambda> |
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216 <Statistics_entropy>0.14</Statistics_entropy> |
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217 </Statistics> |
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218 </Iteration_stat> |
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219 <Iteration_message>No hits found</Iteration_message> |
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220 </Iteration> |
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221 <Iteration> |
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222 <Iteration_iter-num>11</Iteration_iter-num> |
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223 <Iteration_query-ID>sp|Q9NSY1|BMP2K_HUMAN</Iteration_query-ID> |
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224 <Iteration_query-def>BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def> |
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225 <Iteration_query-len>1161</Iteration_query-len> |
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226 <Iteration_hits> |
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227 </Iteration_hits> |
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228 <Iteration_stat> |
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229 <Statistics> |
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230 <Statistics_db-num>0</Statistics_db-num> |
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231 <Statistics_db-len>0</Statistics_db-len> |
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232 <Statistics_hsp-len>38</Statistics_hsp-len> |
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233 <Statistics_eff-space>348130</Statistics_eff-space> |
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234 <Statistics_kappa>0.041</Statistics_kappa> |
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235 <Statistics_lambda>0.267</Statistics_lambda> |
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236 <Statistics_entropy>0.14</Statistics_entropy> |
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237 </Statistics> |
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238 </Iteration_stat> |
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239 <Iteration_message>No hits found</Iteration_message> |
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240 </Iteration> |
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241 <Iteration> |
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242 <Iteration_iter-num>12</Iteration_iter-num> |
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243 <Iteration_query-ID>sp|Q9NSY1|BMP2K_HUMAN</Iteration_query-ID> |
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244 <Iteration_query-def>BMP-2-inducible protein kinase OS=Homo sapiens GN=BMP2K PE=1 SV=2</Iteration_query-def> |
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245 <Iteration_query-len>1161</Iteration_query-len> |
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246 <Iteration_hits> |
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247 </Iteration_hits> |
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248 <Iteration_stat> |
4c4a0da938ff
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249 <Statistics> |
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250 <Statistics_db-num>0</Statistics_db-num> |
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251 <Statistics_db-len>0</Statistics_db-len> |
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252 <Statistics_hsp-len>38</Statistics_hsp-len> |
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253 <Statistics_eff-space>348130</Statistics_eff-space> |
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254 <Statistics_kappa>0.041</Statistics_kappa> |
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255 <Statistics_lambda>0.267</Statistics_lambda> |
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256 <Statistics_entropy>0.14</Statistics_entropy> |
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257 </Statistics> |
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258 </Iteration_stat> |
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259 <Iteration_message>No hits found</Iteration_message> |
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260 </Iteration> |
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261 <Iteration> |
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262 <Iteration_iter-num>13</Iteration_iter-num> |
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263 <Iteration_query-ID>sp|P06213|INSR_HUMAN</Iteration_query-ID> |
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264 <Iteration_query-def>Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def> |
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265 <Iteration_query-len>1382</Iteration_query-len> |
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266 <Iteration_hits> |
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267 </Iteration_hits> |
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268 <Iteration_stat> |
4c4a0da938ff
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269 <Statistics> |
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270 <Statistics_db-num>0</Statistics_db-num> |
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271 <Statistics_db-len>0</Statistics_db-len> |
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272 <Statistics_hsp-len>39</Statistics_hsp-len> |
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273 <Statistics_eff-space>414987</Statistics_eff-space> |
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274 <Statistics_kappa>0.041</Statistics_kappa> |
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275 <Statistics_lambda>0.267</Statistics_lambda> |
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276 <Statistics_entropy>0.14</Statistics_entropy> |
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277 </Statistics> |
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278 </Iteration_stat> |
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279 <Iteration_message>No hits found</Iteration_message> |
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280 </Iteration> |
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281 <Iteration> |
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282 <Iteration_iter-num>14</Iteration_iter-num> |
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283 <Iteration_query-ID>sp|P06213|INSR_HUMAN</Iteration_query-ID> |
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284 <Iteration_query-def>Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def> |
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285 <Iteration_query-len>1382</Iteration_query-len> |
4c4a0da938ff
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286 <Iteration_hits> |
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287 </Iteration_hits> |
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288 <Iteration_stat> |
4c4a0da938ff
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289 <Statistics> |
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290 <Statistics_db-num>0</Statistics_db-num> |
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291 <Statistics_db-len>0</Statistics_db-len> |
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292 <Statistics_hsp-len>39</Statistics_hsp-len> |
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293 <Statistics_eff-space>414987</Statistics_eff-space> |
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294 <Statistics_kappa>0.041</Statistics_kappa> |
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295 <Statistics_lambda>0.267</Statistics_lambda> |
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296 <Statistics_entropy>0.14</Statistics_entropy> |
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297 </Statistics> |
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298 </Iteration_stat> |
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299 <Iteration_message>No hits found</Iteration_message> |
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300 </Iteration> |
4c4a0da938ff
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301 <Iteration> |
4c4a0da938ff
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302 <Iteration_iter-num>15</Iteration_iter-num> |
4c4a0da938ff
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303 <Iteration_query-ID>sp|P06213|INSR_HUMAN</Iteration_query-ID> |
4c4a0da938ff
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304 <Iteration_query-def>Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def> |
4c4a0da938ff
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peterjc
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305 <Iteration_query-len>1382</Iteration_query-len> |
4c4a0da938ff
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306 <Iteration_hits> |
4c4a0da938ff
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307 </Iteration_hits> |
4c4a0da938ff
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308 <Iteration_stat> |
4c4a0da938ff
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309 <Statistics> |
4c4a0da938ff
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310 <Statistics_db-num>0</Statistics_db-num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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311 <Statistics_db-len>0</Statistics_db-len> |
4c4a0da938ff
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peterjc
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312 <Statistics_hsp-len>39</Statistics_hsp-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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313 <Statistics_eff-space>414987</Statistics_eff-space> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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314 <Statistics_kappa>0.041</Statistics_kappa> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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315 <Statistics_lambda>0.267</Statistics_lambda> |
4c4a0da938ff
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peterjc
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316 <Statistics_entropy>0.14</Statistics_entropy> |
4c4a0da938ff
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317 </Statistics> |
4c4a0da938ff
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318 </Iteration_stat> |
4c4a0da938ff
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319 <Iteration_message>No hits found</Iteration_message> |
4c4a0da938ff
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320 </Iteration> |
4c4a0da938ff
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321 <Iteration> |
4c4a0da938ff
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322 <Iteration_iter-num>16</Iteration_iter-num> |
4c4a0da938ff
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323 <Iteration_query-ID>sp|P06213|INSR_HUMAN</Iteration_query-ID> |
4c4a0da938ff
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324 <Iteration_query-def>Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def> |
4c4a0da938ff
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peterjc
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325 <Iteration_query-len>1382</Iteration_query-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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326 <Iteration_hits> |
4c4a0da938ff
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327 </Iteration_hits> |
4c4a0da938ff
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328 <Iteration_stat> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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329 <Statistics> |
4c4a0da938ff
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330 <Statistics_db-num>0</Statistics_db-num> |
4c4a0da938ff
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331 <Statistics_db-len>0</Statistics_db-len> |
4c4a0da938ff
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peterjc
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332 <Statistics_hsp-len>39</Statistics_hsp-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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333 <Statistics_eff-space>414987</Statistics_eff-space> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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334 <Statistics_kappa>0.041</Statistics_kappa> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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335 <Statistics_lambda>0.267</Statistics_lambda> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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336 <Statistics_entropy>0.14</Statistics_entropy> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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337 </Statistics> |
4c4a0da938ff
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338 </Iteration_stat> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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339 <Iteration_message>No hits found</Iteration_message> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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340 </Iteration> |
4c4a0da938ff
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341 <Iteration> |
4c4a0da938ff
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342 <Iteration_iter-num>17</Iteration_iter-num> |
4c4a0da938ff
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343 <Iteration_query-ID>sp|P06213|INSR_HUMAN</Iteration_query-ID> |
4c4a0da938ff
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peterjc
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344 <Iteration_query-def>Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def> |
4c4a0da938ff
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peterjc
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345 <Iteration_query-len>1382</Iteration_query-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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346 <Iteration_hits> |
4c4a0da938ff
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347 </Iteration_hits> |
4c4a0da938ff
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348 <Iteration_stat> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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349 <Statistics> |
4c4a0da938ff
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350 <Statistics_db-num>0</Statistics_db-num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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351 <Statistics_db-len>0</Statistics_db-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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352 <Statistics_hsp-len>39</Statistics_hsp-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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353 <Statistics_eff-space>414987</Statistics_eff-space> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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354 <Statistics_kappa>0.041</Statistics_kappa> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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355 <Statistics_lambda>0.267</Statistics_lambda> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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356 <Statistics_entropy>0.14</Statistics_entropy> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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357 </Statistics> |
4c4a0da938ff
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358 </Iteration_stat> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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359 <Iteration_message>No hits found</Iteration_message> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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360 </Iteration> |
4c4a0da938ff
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361 <Iteration> |
4c4a0da938ff
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362 <Iteration_iter-num>18</Iteration_iter-num> |
4c4a0da938ff
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peterjc
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363 <Iteration_query-ID>sp|P06213|INSR_HUMAN</Iteration_query-ID> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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364 <Iteration_query-def>Insulin receptor OS=Homo sapiens GN=INSR PE=1 SV=4</Iteration_query-def> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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|
365 <Iteration_query-len>1382</Iteration_query-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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366 <Iteration_hits> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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367 </Iteration_hits> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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368 <Iteration_stat> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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369 <Statistics> |
4c4a0da938ff
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370 <Statistics_db-num>0</Statistics_db-num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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371 <Statistics_db-len>0</Statistics_db-len> |
4c4a0da938ff
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peterjc
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372 <Statistics_hsp-len>39</Statistics_hsp-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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|
373 <Statistics_eff-space>414987</Statistics_eff-space> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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374 <Statistics_kappa>0.041</Statistics_kappa> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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|
375 <Statistics_lambda>0.267</Statistics_lambda> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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|
376 <Statistics_entropy>0.14</Statistics_entropy> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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377 </Statistics> |
4c4a0da938ff
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|
378 </Iteration_stat> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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379 <Iteration_message>No hits found</Iteration_message> |
4c4a0da938ff
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|
380 </Iteration> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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|
381 <Iteration> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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382 <Iteration_iter-num>19</Iteration_iter-num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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|
383 <Iteration_query-ID>sp|P08100|OPSD_HUMAN</Iteration_query-ID> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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|
384 <Iteration_query-def>Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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|
385 <Iteration_query-len>348</Iteration_query-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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|
386 <Iteration_hits> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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|
387 <Hit> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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|
388 <Hit_num>1</Hit_num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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|
389 <Hit_id>gi|57163783|ref|NP_001009242.1|</Hit_id> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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|
390 <Hit_def>rhodopsin [Felis catus]</Hit_def> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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|
391 <Hit_accession>NP_001009242</Hit_accession> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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|
392 <Hit_len>348</Hit_len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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|
393 <Hit_hsps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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|
394 <Hsp> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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|
395 <Hsp_num>1</Hsp_num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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396 <Hsp_bit-score>701.049</Hsp_bit-score> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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397 <Hsp_score>1808</Hsp_score> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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398 <Hsp_evalue>0</Hsp_evalue> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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399 <Hsp_query-from>1</Hsp_query-from> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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400 <Hsp_query-to>348</Hsp_query-to> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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401 <Hsp_hit-from>1</Hsp_hit-from> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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402 <Hsp_hit-to>348</Hsp_hit-to> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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403 <Hsp_query-frame>0</Hsp_query-frame> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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404 <Hsp_hit-frame>0</Hsp_hit-frame> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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405 <Hsp_identity>336</Hsp_identity> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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406 <Hsp_positive>343</Hsp_positive> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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407 <Hsp_gaps>0</Hsp_gaps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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408 <Hsp_align-len>348</Hsp_align-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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409 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_qseq> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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410 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTGSKTETSQVAPA</Hsp_hseq> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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411 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T SKTETSQVAPA</Hsp_midline> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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412 </Hsp> |
4c4a0da938ff
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413 </Hit_hsps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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414 </Hit> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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415 </Iteration_hits> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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416 <Iteration_stat> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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417 <Statistics> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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418 <Statistics_db-num>0</Statistics_db-num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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419 <Statistics_db-len>0</Statistics_db-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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420 <Statistics_hsp-len>29</Statistics_hsp-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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421 <Statistics_eff-space>101761</Statistics_eff-space> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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422 <Statistics_kappa>0.041</Statistics_kappa> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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423 <Statistics_lambda>0.267</Statistics_lambda> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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424 <Statistics_entropy>0.14</Statistics_entropy> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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425 </Statistics> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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426 </Iteration_stat> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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427 </Iteration> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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428 <Iteration> |
4c4a0da938ff
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429 <Iteration_iter-num>20</Iteration_iter-num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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430 <Iteration_query-ID>sp|P08100|OPSD_HUMAN</Iteration_query-ID> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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431 <Iteration_query-def>Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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432 <Iteration_query-len>348</Iteration_query-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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433 <Iteration_hits> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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434 <Hit> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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435 <Hit_num>1</Hit_num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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436 <Hit_id>gi|3024260|sp|P56514.1|OPSD_BUFBU</Hit_id> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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437 <Hit_def>RecName: Full=Rhodopsin</Hit_def> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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438 <Hit_accession>P56514</Hit_accession> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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439 <Hit_len>354</Hit_len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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440 <Hit_hsps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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441 <Hsp> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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442 <Hsp_num>1</Hsp_num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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443 <Hsp_bit-score>619.002</Hsp_bit-score> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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444 <Hsp_score>1595</Hsp_score> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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445 <Hsp_evalue>0</Hsp_evalue> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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446 <Hsp_query-from>1</Hsp_query-from> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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447 <Hsp_query-to>341</Hsp_query-to> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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448 <Hsp_hit-from>1</Hsp_hit-from> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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449 <Hsp_hit-to>342</Hsp_hit-to> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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450 <Hsp_query-frame>0</Hsp_query-frame> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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451 <Hsp_hit-frame>0</Hsp_hit-frame> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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452 <Hsp_identity>290</Hsp_identity> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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453 <Hsp_positive>322</Hsp_positive> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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454 <Hsp_gaps>1</Hsp_gaps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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455 <Hsp_align-len>342</Hsp_align-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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456 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEA-SATVSKTE</Hsp_qseq> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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457 <Hsp_hseq>MNGTEGPNFYIPMSNKTGVVRSPFEYPQYYLAEPWQYSILCAYMFLLILLGFPINFMTLYVTIQHKKLRTPLNYILLNLAFANHFMVLCGFTVTMYSSMNGYFILGATGCYVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFSENHAVMGVAFTWIMALSCAVPPLLGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFVVHFTIPLIIIFFCYGRLVCTVKEAAAQQQESATTQKAEKEVTRMVIIMVVFFLICWVPYASVAFFIFSNQGSEFGPIFMTVPAFFAKSSSIYNPVIYIMLNKQFRNCMITTLCCGKNPFGEDDASSAATSKTE</Hsp_hseq> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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458 <Hsp_midline>MNGTEGPNFY+P SN TGVVRSPFEYPQYYLAEPWQ+S+L AYMFLLI+LGFPINF+TLYVT+QHKKLRTPLNYILLNLA A+ FMVL GFT T+Y+S++GYF+ G TGC +EGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF ENHA+MGVAFTW+MAL+CA PPL GWSRYIPEG+QCSCG+DYYTLKPEVNNESFVIYMFVVHFTIP+IIIFFCYG+LV TVKEAAAQQQESATTQKAEKEVTRMVIIMV+ FLICWVPYASVAF+IF++QGS FGPIFMT+PAFFAKS++IYNPVIYIM+NKQFRNCM+TT+CCGKNP G+D+A SA SKTE</Hsp_midline> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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459 </Hsp> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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460 </Hit_hsps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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461 </Hit> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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462 </Iteration_hits> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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463 <Iteration_stat> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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464 <Statistics> |
4c4a0da938ff
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465 <Statistics_db-num>0</Statistics_db-num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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466 <Statistics_db-len>0</Statistics_db-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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467 <Statistics_hsp-len>29</Statistics_hsp-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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468 <Statistics_eff-space>101761</Statistics_eff-space> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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469 <Statistics_kappa>0.041</Statistics_kappa> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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470 <Statistics_lambda>0.267</Statistics_lambda> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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471 <Statistics_entropy>0.14</Statistics_entropy> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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472 </Statistics> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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473 </Iteration_stat> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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474 </Iteration> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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475 <Iteration> |
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Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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476 <Iteration_iter-num>21</Iteration_iter-num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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477 <Iteration_query-ID>sp|P08100|OPSD_HUMAN</Iteration_query-ID> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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478 <Iteration_query-def>Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
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479 <Iteration_query-len>348</Iteration_query-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
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480 <Iteration_hits> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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481 <Hit> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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482 <Hit_num>1</Hit_num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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483 <Hit_id>gi|283855846|gb|ADB45242.1|</Hit_id> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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484 <Hit_def>rhodopsin [Cynopterus brachyotis]</Hit_def> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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485 <Hit_accession>ADB45242</Hit_accession> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
486 <Hit_len>328</Hit_len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
487 <Hit_hsps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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488 <Hsp> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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489 <Hsp_num>1</Hsp_num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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490 <Hsp_bit-score>653.284</Hsp_bit-score> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
491 <Hsp_score>1684</Hsp_score> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
492 <Hsp_evalue>0</Hsp_evalue> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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493 <Hsp_query-from>11</Hsp_query-from> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
494 <Hsp_query-to>338</Hsp_query-to> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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495 <Hsp_hit-from>1</Hsp_hit-from> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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496 <Hsp_hit-to>328</Hsp_hit-to> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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497 <Hsp_query-frame>0</Hsp_query-frame> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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498 <Hsp_hit-frame>0</Hsp_hit-frame> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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499 <Hsp_identity>311</Hsp_identity> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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500 <Hsp_positive>321</Hsp_positive> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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501 <Hsp_gaps>0</Hsp_gaps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
502 <Hsp_align-len>328</Hsp_align-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
503 <Hsp_qseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVS</Hsp_qseq> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
504 <Hsp_hseq>VPFSNKTGVVRSPFEHPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLALTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSNFGPIFMTLPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_hseq> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
505 <Hsp_midline>VPFSN TGVVRSPFE+PQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+A TWVMALACAAPPL GWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGSNFGPIFMT+PAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T S</Hsp_midline> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
506 </Hsp> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
507 </Hit_hsps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
508 </Hit> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
509 </Iteration_hits> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
510 <Iteration_stat> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
511 <Statistics> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
512 <Statistics_db-num>0</Statistics_db-num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
513 <Statistics_db-len>0</Statistics_db-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
514 <Statistics_hsp-len>29</Statistics_hsp-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
515 <Statistics_eff-space>101761</Statistics_eff-space> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
516 <Statistics_kappa>0.041</Statistics_kappa> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
517 <Statistics_lambda>0.267</Statistics_lambda> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
518 <Statistics_entropy>0.14</Statistics_entropy> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
519 </Statistics> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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diff
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|
520 </Iteration_stat> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
521 </Iteration> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
522 <Iteration> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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523 <Iteration_iter-num>22</Iteration_iter-num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
524 <Iteration_query-ID>sp|P08100|OPSD_HUMAN</Iteration_query-ID> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
525 <Iteration_query-def>Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
526 <Iteration_query-len>348</Iteration_query-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
527 <Iteration_hits> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
528 <Hit> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
529 <Hit_num>1</Hit_num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
changeset
|
530 <Hit_id>gi|283855823|gb|ADB45229.1|</Hit_id> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
531 <Hit_def>rhodopsin [Myotis pilosus]</Hit_def> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
532 <Hit_accession>ADB45229</Hit_accession> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
533 <Hit_len>328</Hit_len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
534 <Hit_hsps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
535 <Hsp> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
536 <Hsp_num>1</Hsp_num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
537 <Hsp_bit-score>631.328</Hsp_bit-score> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
538 <Hsp_score>1627</Hsp_score> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
539 <Hsp_evalue>0</Hsp_evalue> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
540 <Hsp_query-from>11</Hsp_query-from> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
541 <Hsp_query-to>338</Hsp_query-to> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
542 <Hsp_hit-from>1</Hsp_hit-from> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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diff
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|
543 <Hsp_hit-to>328</Hsp_hit-to> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
544 <Hsp_query-frame>0</Hsp_query-frame> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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diff
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|
545 <Hsp_hit-frame>0</Hsp_hit-frame> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
546 <Hsp_identity>311</Hsp_identity> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
547 <Hsp_positive>323</Hsp_positive> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
548 <Hsp_gaps>0</Hsp_gaps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
549 <Hsp_align-len>328</Hsp_align-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
550 <Hsp_qseq>VPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVS</Hsp_qseq> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
551 <Hsp_hseq>VPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVANLFMVFGGFTTTLYTSMHGYFVFGATGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGLAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVVAFLICWLPYASVAFYIFTHQGSNFGPVFMTIPAFFAKSSSIYNPVIYIMMNKQFRNCMLTTLCCGKNPLGDDEASTTAS</Hsp_hseq> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
552 <Hsp_midline>VPFSN TGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA+LFMV GGFT+TLYTS+HGYFVFG TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMG+AFTWVMALACAAPPLAGWSRYIPEG+QCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMI+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMV+AFLICW+PYASVAFYIFTHQGSNFGP+FMTIPAFFAKS++IYNPVIYIMMNKQFRNCMLTT+CCGKNPLGDDEAS T S</Hsp_midline> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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diff
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|
553 </Hsp> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
554 </Hit_hsps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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diff
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|
555 </Hit> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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diff
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|
556 </Iteration_hits> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
557 <Iteration_stat> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
558 <Statistics> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
559 <Statistics_db-num>0</Statistics_db-num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
560 <Statistics_db-len>0</Statistics_db-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
561 <Statistics_hsp-len>29</Statistics_hsp-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
562 <Statistics_eff-space>101761</Statistics_eff-space> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
563 <Statistics_kappa>0.041</Statistics_kappa> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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564 <Statistics_lambda>0.267</Statistics_lambda> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
changeset
|
565 <Statistics_entropy>0.14</Statistics_entropy> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
566 </Statistics> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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diff
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|
567 </Iteration_stat> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
changeset
|
568 </Iteration> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
569 <Iteration> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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570 <Iteration_iter-num>23</Iteration_iter-num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
changeset
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571 <Iteration_query-ID>sp|P08100|OPSD_HUMAN</Iteration_query-ID> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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572 <Iteration_query-def>Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
573 <Iteration_query-len>348</Iteration_query-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
changeset
|
574 <Iteration_hits> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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diff
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|
575 <Hit> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
576 <Hit_num>1</Hit_num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
577 <Hit_id>gi|223523|prf||0811197A</Hit_id> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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578 <Hit_def>rhodopsin [Bos taurus]</Hit_def> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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diff
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579 <Hit_accession>0811197A</Hit_accession> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
580 <Hit_len>347</Hit_len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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diff
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|
581 <Hit_hsps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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diff
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|
582 <Hsp> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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583 <Hsp_num>1</Hsp_num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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584 <Hsp_bit-score>673.315</Hsp_bit-score> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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diff
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585 <Hsp_score>1736</Hsp_score> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
586 <Hsp_evalue>0</Hsp_evalue> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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587 <Hsp_query-from>1</Hsp_query-from> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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diff
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|
588 <Hsp_query-to>348</Hsp_query-to> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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diff
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589 <Hsp_hit-from>1</Hsp_hit-from> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
590 <Hsp_hit-to>347</Hsp_hit-to> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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591 <Hsp_query-frame>0</Hsp_query-frame> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
592 <Hsp_hit-frame>0</Hsp_hit-frame> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
593 <Hsp_identity>324</Hsp_identity> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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diff
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|
594 <Hsp_positive>336</Hsp_positive> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
595 <Hsp_gaps>1</Hsp_gaps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
596 <Hsp_align-len>348</Hsp_align-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
597 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPLGDDEASATVSKTETSQVAPA</Hsp_qseq> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
changeset
|
598 <Hsp_hseq>MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGID-YTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA</Hsp_hseq> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
599 <Hsp_midline>MNGTEGPNFYVPFSN TGVVRSPFE PQYYLAEPWQFSMLAAYMFLLI+LGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMV GGFT+TLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPL GWSRYIPEG+QCSCGID YT E NNESFVIYMFVVHF IP+I+IFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICW+PYA VAFYIFTHQGS+FGPIFMTIPAFFAK++A+YNPVIYIMMNKQFRNCM+TT+CCGKNPLGDDEAS TVSKTETSQVAPA</Hsp_midline> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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600 </Hsp> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
601 </Hit_hsps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
602 </Hit> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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603 </Iteration_hits> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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604 <Iteration_stat> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
605 <Statistics> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
606 <Statistics_db-num>0</Statistics_db-num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
607 <Statistics_db-len>0</Statistics_db-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
608 <Statistics_hsp-len>29</Statistics_hsp-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
609 <Statistics_eff-space>101761</Statistics_eff-space> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
610 <Statistics_kappa>0.041</Statistics_kappa> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
611 <Statistics_lambda>0.267</Statistics_lambda> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
changeset
|
612 <Statistics_entropy>0.14</Statistics_entropy> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
changeset
|
613 </Statistics> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
614 </Iteration_stat> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
615 </Iteration> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
616 <Iteration> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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617 <Iteration_iter-num>24</Iteration_iter-num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
618 <Iteration_query-ID>sp|P08100|OPSD_HUMAN</Iteration_query-ID> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
619 <Iteration_query-def>Rhodopsin OS=Homo sapiens GN=RHO PE=1 SV=1</Iteration_query-def> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
620 <Iteration_query-len>348</Iteration_query-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
621 <Iteration_hits> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
622 <Hit> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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623 <Hit_num>1</Hit_num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
624 <Hit_id>gi|12583665|dbj|BAB21486.1|</Hit_id> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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625 <Hit_def>fresh water form rod opsin [Conger myriaster]</Hit_def> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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diff
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|
626 <Hit_accession>BAB21486</Hit_accession> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
627 <Hit_len>354</Hit_len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
628 <Hit_hsps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
629 <Hsp> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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630 <Hsp_num>1</Hsp_num> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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631 <Hsp_bit-score>599.356</Hsp_bit-score> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
632 <Hsp_score>1544</Hsp_score> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
633 <Hsp_evalue>0</Hsp_evalue> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
634 <Hsp_query-from>1</Hsp_query-from> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
635 <Hsp_query-to>341</Hsp_query-to> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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636 <Hsp_hit-from>1</Hsp_hit-from> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
637 <Hsp_hit-to>342</Hsp_hit-to> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
638 <Hsp_query-frame>0</Hsp_query-frame> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
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|
639 <Hsp_hit-frame>0</Hsp_hit-frame> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
640 <Hsp_identity>281</Hsp_identity> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
641 <Hsp_positive>314</Hsp_positive> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
642 <Hsp_gaps>1</Hsp_gaps> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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|
643 <Hsp_align-len>342</Hsp_align-len> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
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|
644 <Hsp_qseq>MNGTEGPNFYVPFSNATGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKNPL-GDDEASATVSKTE</Hsp_qseq> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
8
diff
changeset
|
645 <Hsp_hseq>MNGTEGPNFYIPMSNATGVVRSPFEYPQYYLAEPWAFSALSAYMFFLIIAGFPINFLTLYVTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVFGPTGCNIEGFFATLGGEIALWCLVVLAIERWMVVCKPVTNFRFGESHAIMGVMVTWTMALACALPPLFGWSRYIPEGLQCSCGIDYYTRAPGINNESFVIYMFTCHFSIPLAVISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVISFLVCWVPYASVAWYIFTHQGSTFGPIFMTIPSFFAKSSALYNPMIYICMNKQFRHCMITTLCCGKNPFEEEDGASATSSKTE</Hsp_hseq> |
4c4a0da938ff
Uploaded v0.0.22, now wraps BLAST+ 2.2.28 allowing extended tabular output to include the hit descriptions as column 25.
peterjc
parents:
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646 <Hsp_midline>MNGTEGPNFY+P SNATGVVRSPFEYPQYYLAEPW FS L+AYMF LI+ GFPINFLTLYVT++HKKLRTPLNYILLNLAVADLFMV GGFT+T+YTS+HGYFVFGPTGCN+EGFFATLGGEIALW LVVLAIER++VVCKP++NFRFGE+HAIMGV TW MALACA PPL GWSRYIPEGLQCSCGIDYYT P +NNESFVIYMF HF+IP+ +I FCYG+LV TVKEAAAQQQES TTQ+AE+EVTRMV+IMVI+FL+CWVPYASVA+YIFTHQGS FGPIFMTIP+FFAKS+A+YNP+IYI MNKQFR+CM+TT+CCGKNP +D ASAT SKTE</Hsp_midline> |
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647 </Hsp> |
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648 </Hit_hsps> |
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649 </Hit> |
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650 </Iteration_hits> |
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651 <Iteration_stat> |
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652 <Statistics> |
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653 <Statistics_db-num>0</Statistics_db-num> |
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654 <Statistics_db-len>0</Statistics_db-len> |
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655 <Statistics_hsp-len>29</Statistics_hsp-len> |
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656 <Statistics_eff-space>101761</Statistics_eff-space> |
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657 <Statistics_kappa>0.041</Statistics_kappa> |
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658 <Statistics_lambda>0.267</Statistics_lambda> |
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659 <Statistics_entropy>0.14</Statistics_entropy> |
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660 </Statistics> |
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661 </Iteration_stat> |
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662 </Iteration> |
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663 </BlastOutput_iterations> |
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664 </BlastOutput> |
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665 |